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Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Aerts, C. M., Strange, P., Horne, M., Temmerman, W. M., Szotek, Z. & Svane, A. (2004). Half-metallic to insulating behavior of rare-earth nitrides. Physical Review B, 69, 045115-1.
Aerts, C., Kawaler, S., Bedding, T., Cacciari, C., Christensen-Dalsgaard, J., Cottrell, P., Cunha, M., Handler, G., Martinez, P., Sasselov, D., Seetha, S. & Welch, D. (2007). Commission C27: Variable Stars. In O. Engvold (Ed.), Reports on Astronomy 2002-2005: Transactions T26A (Vol. 1, pp. 247-258). International Astronomical Union.
Aerts, C., Christensen-Dalsgaard, J., Cunha, M. & Kurtz, D. W. (2008). The Current Status of Asteroseismology. Solar Physics, 251(1-2), 3-20. https://doi.org/10.1007/s11207-008-9182-z
Aerts, C., Símon-Díaz, S., Bloemen, S., Debosscher, J., Papics, P. I., Bryson, S., Still, M., Moravveji, E., Williamson, M. H., Grundahl, F., Andersen, M. F., Antoci, V., Palle, P. L., Christensen-Dalsgaard, J. & Rogers, M. T. (2017). Kepler sheds new and unprecedented light on the variability of a blue supergiant: Gravity waves in the O9.5Iab star HD 188209. Astronomy & Astrophysics (A&A), 602, Article A32. https://doi.org/10.1051/0004-6361/201730571
Aerts, C., Bowman, D. M., Simon-Diaz, S., Buysschaert, B., Johnston, C., Moravveji, E., Beck, P. G., De Cat, P., Triana, S., Aigrain, S., Castro, N., Huber, D. & White, T. (2018). K2 photometry and HERMES spectroscopy of the blue supergiant rho Leo: rotational wind modulation and low-frequency waves. Royal Astronomical Society. Monthly Notices, 476(1), 1234-1241. https://doi.org/10.1093/mnras/sty308
Africh, C., Esch, F., Li, W. X., Corso, M., Hammer, B., Rosei, R. & Comelli, G. (2004). Two-step reaction on a strained, nanoscale segmented surface. Physical Review Letters, 93(12), 126104. http://www.phys.au.dk/~hammer/77.pdf
Afrosimov, V. V., Basalaev, A. A., Fastrup, B., Horsdal, E., Panov, M. N., Tulub, A. V. & Yakovlev, D. S. (2003). Ionization and fragmentation of Freon-12 molecules in collisions with protons. J. Phys. B: At. Mol. Opt. Phys., 36, 1991-2000.
Afrough, A., Mokhtari, R. & Feilberg, K. L. (2024). Simple MATLAB and Python scripts for multi-exponential analysis. Magnetic Resonance in Chemistry, 62(10), 698-711. https://doi.org/10.1002/mrc.5453
Afrough, A., Weihrauch, T. N. A., Juhl, D. W., Bakalis, S., Malmos, K. G. & Vosegaard, T. (2024). Water in Fat-Filled Milk Powder: New Insights by Magnetic Resonance Spectroscopy. Poster session presented at 19th Food Colloids Conference, Thessaloniki, Greece.
Afrough, A. (2024). Analogy Between Magnetic Resonance Relaxation and First-Order Chemical Reaction in Porous Media. 225. Abstract from 16th International Conference of Magnetic Resonance in Porous Media, Tromsø, Norway.
Afshani, P., Barbay, J. & Chan, T. M. (2009). Instance-optimal geometric algorithms. In 50th Annual Symposium on Foundations of Computer Science. Proceedings (pp. 129-138). IEEE Computer Society Press. https://doi.org/10.1109/FOCS.2009.34
Afshani, P., Hamilton, C. & Zeh, N. (2009). Cache-oblivious range reporting with optimal queries requires superlinear space. In Proceedings of the 25th annual symposium on Computational geometry (pp. 277-286). Association for Computing Machinery. https://doi.org/10.1145/1542362.1542412
Afshani, P., Hamilton, C. & Zeh, N. (2009). A general approach for cache-oblivious range reporting and approximate range counting. In Proceedings of the 25th annual symposium on Computational geometry Association for Computing Machinery. https://doi.org/10.1145/1542362.1542413
Afshani, P., Brodal, G. S. & Zeh, N. (2011). Ordered and Unordered Top-K Range Reporting in Large Data Sets. In Proceedings of the 22nd Annual ACM-SIAM Symposium on Discrete Algoritms. SODA 2011 (pp. 390-400). Society for Industrial and Applied Mathematics. http://www.siam.org/proceedings/soda/2011/SODA11_031_afshanip.pdf
Afshani, P., Arge, L. A. & Larsen, K. D. (2010). I/O-efficient Orthogonal Range Reporting in Three and Higher Dimensions. Abstract from Workshop on Massive Data Algorithms, Snowbird, United States.
Afshani, P. & Zeh, N. (2011). Improved Space Bounds for Cache-Oblivious Range Reporting. In Proceedings of the 22nd Annual ACM-SIAM Symposium on Discrete Algorithms. SODA 2011 (pp. 1745-1758). Society for Industrial and Applied Mathematics. http://www.siam.org/proceedings/soda/2011/SODA11_133_afshanip.pdf
Afshani, P., Agarwal, P. K., Arge, L. A., Larsen, K. G. & Phillips, J. M. (2011). (Approximate) Uncertain Skylines. In Proceedings of the 14th International Conference on Database Theory (pp. 186-196). Association for Computing Machinery. https://doi.org/10.1145/1938551.1938576
Afshani, P., Agarwal, P. K., Arge, L., Larsen, K. G. & Phillips, J. (2013). (Approximate) Uncertain Skylines. Theory of Computing Systems, 52(3), 342-366. https://doi.org/10.1007/s00224-012-9382-7
Afshani, P. (2012). Improved pointer machine and I/O lower bounds for simplex range reporting and related problems. In Proceedings of the 2012 Symposuim on Computational Geometry, SoCG (pp. 339-346 ). Association for Computing Machinery. https://doi.org/10.1145/2261250.2261301
Afshani, P., Afrawal, M., Benjamin, D., Larsen, K. G., Mehlhorn, K. & Winzen, C. (2012). The Query Complexity of Finding a Hidden Permutation. Electronic Colloquium on Computational Complexity, (TR12-087). http://eccc.hpi-web.de/report/2012/087/
Afshani, P., Chan, T. M. & Tsakalidis, K. (2014). Deterministic Rectangle Enclosure and Offline Dominance Reporting on the RAM. In J. Esparza , P. Fraigniaud, T. Husfeldt & E. Koutsoupias (Eds.), Automata, Languages, and Programming: 41st International Colloquium, ICALP 2014, Copenhagen, Denmark, July 8-11, 2014, Proceedings, Part I (pp. 77-88 ). Springer VS. https://doi.org/10.1007/978-3-662-43948-7_7
Afshani, P., Agrawal, M., Benjamin, D., Doerr, C., Larsen, K. G. & Mehlhorn, K. (2013). The Query Complexity of Finding a Hidden Permutation. In A. Brodnik, A. López-Ortiz, V. Raman & A. Viola (Eds.), Space-Efficient Data Structures, Streams, and Algorithms: Papers in Honor of J. Ian Munro on the Occasion of His 66th Birthday (pp. 1-11). Springer VS. https://doi.org/10.1007/978-3-642-40273-9_1
Afshani, P., Sheng, C., Tao, Y. & Wilkinson, B. T. (2014). Concurrent range reporting in two-dimensional space. In C. Chekuri (Ed.), Proceedings of the 25th Annual ACM-SIAM Symposium on Discrete Algorithms: SODA 2014; Portland, OR; United States; 5 January 2014 through 7 January 2014 (pp. 983-994). Association for Computing Machinery. http://www.scopus.com/inward/record.url?scp=84902105500&partnerID=8YFLogxK
Afshani, P. & Tsakalidis, K. (2014). Optimal deterministic shallow cuttings for 3D dominance ranges. In C. Chekuri (Ed.), Proceedings of the 25th Annual ACM-SIAM Symposium on Discrete Algorithms: SODA 2014; Portland, OR; United States; 5 January 2014 through 7 January 2014 (pp. 1389-1398 ). Association for Computing Machinery. http://www.scopus.com/inward/record.url?scp=84902105500&partnerID=8YFLogxK
Afshani, P. (2014). Fast Computation of Output-Sensitive Maxima in a Word RAM. In C. Chekuri (Ed.), Proceedings of the 25th Annual ACM-SIAM Symposium on Discrete Algorithms: SODA 2014; Portland, OR; United States; 5 January 2014 through 7 January 2014 (pp. 1414-1423). Association for Computing Machinery. http://www.scopus.com/inward/record.url?scp=84902105500&partnerID=8YFLogxK
Afshani, P. & Sitchinava, N. (2014). I/O-efficient range minima queries. In R. Ravi & I. L. Gørtz (Eds.), Algorithm Theory – SWAT 2014: 14th Scandinavian Symposium and Workshops, Copenhagen, Denmark, July 2-4, 2014. Proceedings (pp. 1-12). Springer VS. https://doi.org/10.1007/978-3-319-08404-6_1
Afshani, P. & Sitchinava , N. (2015). Sorting and Permuting without Bank Conflicts on GPUs. In N. Bansal & I. Finocchi (Eds.), Algorithms – ESA 2015: 23rd Annual European Symposium, Patras, Greece, September 14–16, 2015, Proceedings (pp. 13-24). Springer VS. https://doi.org/10.1007/978-3-662-48350-3_2
Afshani, P., Berglin, E., Van Duijn, I. & Nielsen, J. S. (2016). Applications of incidence bounds in point covering problems. In S. Fekete & A. Lubiw (Eds.), 32nd International Symposium on Computational Geometry, SoCG 2016 (Vol. 51, pp. 60.1-60.15). Dagstuhl Publishing. https://doi.org/10.4230/LIPIcs.SoCG.2016.60
Afshani, P. & Nielsen, J. A. S. (2016). Data Structure Lower Bounds for Document Indexing Problems. In I. Chatzigiannakis, M. Mitzenmacher, Y. Rabani & D. Sangiorgi (Eds.), 43rd International Colloquium on Automata, Languages, and Programming (ICALP 2016) (Vol. 55, pp. 93:1-93:15). Article 93 Dagstuhl Publishing. https://doi.org/10.4230/LIPIcs.ICALP.2016.93
Afshani, P. & Van Duijn, I. (2017). Permuting and batched geometric lower bounds in the I/O model. In K. Pruhs & C. Sohler (Eds.), 25th European Symposium on Algorithms, ESA 2017 (Vol. 87, pp. 2:1-2:13). Article 2 Dagstuhl Publishing. https://doi.org/10.4230/LIPIcs.ESA.2017.2
Afshani, P. & Wei, Z. (2017). Independent range sampling, revisited. In K. Pruhs & C. Sohler (Eds.), 25th European Symposium on Algorithms, ESA 2017 (Vol. 87, pp. 3:1--3:14). Article 3 Dagstuhl Publishing. https://doi.org/10.4230/LIPIcs.ESA.2017.3
Afshani, P., De Berg, M., Casanova, H., Karsin, B., Lambrechts, C., Sitchinava, N. & Tsirogiannis, C. (2017). An efficient algorithm for the 1D total visibility-index problem. In S. Fekete & V. Ramachandran (Eds.), 2017 Proceedings of the Ninteenth Workshop on Algorithm Engineering and Experiments (ALENEX) (Vol. PRAL17, pp. 218-231). Society for Industrial and Applied Mathematics. https://doi.org/10.1137/1.9781611974768.18
Afshani, P., Bender, M. A., Farach-Colton, M., Fineman, J. T., Goswami, M. & Tsai, M. T. (2017). Cross-Referenced dictionaries and the limits of write optimization. In P. N. Klein (Ed.), 28th Annual ACM-SIAM Symposium on Discrete Algorithms, SODA 2017 (pp. 1523-1532). Association for Computing Machinery.
Afshani, P. & Driemel, A. (2018). On the complexity of range searching among curves. In A. Czumaj (Ed.), 29th Annual ACM-SIAM Symposium on Discrete Algorithms, SODA 2018 (pp. 898-917). Association for Computing Machinery. https://doi.org/10.1137/1.9781611975031.58
Afshani, P., De Berg, M., Casanova, H., Karsin, B., Lambrechts, C., Sitchinava, N. & Tsirogiannis, C. (2018). An efficient algorithm for the 1D total visibility-index problem and its parallelization. ACM Journal of Experimental Algorithmics, 23, Article 2.3. https://doi.org/10.1145/3209685
Afshani, P., Agrawal, M., Doerr, B., Doerr, C., Larsen, K. G. & Mehlhorn, K. (2019). The query complexity of a permutation-based variant of Mastermind. Discrete Applied Mathematics, 260, 28-50. https://doi.org/10.1016/j.dam.2019.01.007
Afshani, P. & Phillips, J. M. (2019). Independent range sampling, revisited again. In G. Barequet & Y. Wang (Eds.), 35th International Symposium on Computational Geometry, SoCG 2019 Article 4 Dagstuhl Publishing. https://doi.org/10.4230/LIPIcs.SoCG.2019.4

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Wheat, C. G., Jannasch, H., Kastner, M., Hulme, S., Cowen, J., Edwards, K., Orcutt, B. & Glazer, B. (2011). Fluid sampling from oceanic borehole observatories: design and methods for CORK activities (1990-2010). In Proc. IODP, 327 (Vol. 327). Integrated Ocean Drilling Program Management International, Inc.. https://doi.org/10.2204/iodp.proc.327.109.2011
Wheat, C. G., Hulme, S. M., Fisher, A. T., Orcutt, B. N. & Becker, K. (2013). Seawater recharge into oceanic crust: IODP Exp 327 Site U1363 Grizzly Bare outcrop. Geochemistry, Geophysics, Geosystems, 14(6), 1957-1972. https://doi.org/10.1002/ggge.20131
Wetter, M., Cong, N., Nielsen, T., Bayley, M., Funch, P., Intanai, I. & Wang, T. (2008). Osmoregulation and acid base regulation of the Asian Horseshoe crab Carcinoscorpius rotundicauda. Comparative Biochemistry and Physiology - Part A: Molecular & Integrative Physiology, 150(3), S107. https://doi.org/10.1016/j.cbpa.2008.04.228
West, R. G., Andrew, R., Catt, J. A., Hart, C. P., Hollin, J. T., Knudsen, K. L., Miller, G. F., Penney, D. N., Pettit, M. E., Preece, R. C., Switsur, V. R., Whiteman, C. A. & Zhou, L. P. (1999). Late and Middle Pleistocene deposits at Somersham, Cambridgeshire, U.K. A model for reconstructing fluvial/estuarine depositional environments. Quaternary Science Reviews, 18(10-11), 1247-1314. https://doi.org/10.1016/S0277-3791(98)00067-5
Wessig, P., Glombitza, C., Müller, G. & Teubner, J. (2004). Photochemical Preparation of Highly Functionalized 1-Indanones. Journal of Organic Chemistry, 69(22), 7582-7591. https://doi.org/10.1021/jo040173x
Wernersson, R., Schierup, M. H., Jørgensen, F. G., Gorodkin, J., Panitz, F., Staerfeldt, HH., Christensen, O. F., Mailund, T., Hornshøj, H., Klein, A., Jun, W., Liu, B., Hu, S., Dong, W., Li, W., Wong, GK.-S., Yu, J., Wang, J., Bendixen, C. ... Bolund, L. (2005). Pigs in Sequence Space: A 0.66X Coverage Pig Genome Survey based on Shotgun Sequencing. BMC Genomics, 6(70). http://www.biomedcentral.com/1471-2164/6/70
Wen, L., Zhao, K., Sun, H., Feng, G., Sun, Q., Liang, C., Li, Z., Wang, L. & Svenning, J. C. (2024). Drivers of desert plant beta diversity on the Qinghai–Tibet plateau. Ecology and Evolution, 14(2), Article e10993. https://doi.org/10.1002/ece3.10993
Wells, R. M. G. & Weber, R. E. (1990). The spleen in hypoxic and exercised rainbow trout. Journal of Experimental Biology, 150, 461-466.
Wells, R. M. G., Baldwin, J., Seymour, R. S. & Weber, R. E. (1997). Blood oxygen transport and hemoglobin function in three tropical fish species from northern Australian freshwater billabongs. Fish Physiology & Biochemistry, 16, 247-258.
Wells, R. M. G., Davie, P. S. & Weber, R. E. (1991). Effect of α-adrenergic stimulation of trout erythrocytes on blood viscosity. Comparative Biochemistry and Physiology Part C: Comparative Pharmacology, 653-655.
Wells, R. M. G. & Weber, R. E. (1989). The measurement of oxygen affinity in blood and haemoglobin solutions. In C. R. Bridges & P. J. Butler (Eds.), Techniques in Comparative Respiratory Physiology: An Experimental Approach (pp. 279-303).
Welinder, K. G., Hansen, R., Overgaard, M. T., Brohus, M., Sonderkaer, M., von Bergen, M., Rolle-Kampczyk, U., Otto, W., Lindahl, T. L., Arinell, K., Evans, A. L., Swenson, J. E., Revsbech, I. G. & Frobert, O. (2016). Biochemical Foundations of Health and Energy Conservation in Hibernating Free-ranging Subadult Brown Bear Ursus arctos. Journal of Biological Chemistry, 291(43), 22509-22523. https://doi.org/10.1074/jbc.M116.742916
Weigelt, P., Steinbauer, M., Cabral, J. & Kreft, H. (2016). Late Quaternary climate change shapes island biodiversity. Nature, 532(7597), 99-102. https://doi.org/10.1038/nature17443
Wei, F., Wang, S., Fu, B., Wang, L., Zhang, W., Wang, L., Pan, N. & Fensholt, R. (2022). Divergent trends of ecosystem-scale photosynthetic efficiency between arid and humid lands across the globe. Global Ecology and Biogeography, 31(9), 1824-1837. https://doi.org/10.1111/geb.13561
Wei, F., Qiu, X., Wang, B., Lu, S., Zhang, L., Yi, G., Feng, Y., Nie, J., Shao, P., Liu, W., Yang, L., Wang, A. J. & Luo, X. (2024). Electrodeposited Palladium Nanoparticles Enhancing Atomic Hydrogen-Mediated Electrochemical Recovery of Antimony. ACS ES&T Engineering, 4(7), 1668-1678. https://doi.org/10.1021/acsestengg.4c00078
Wehrmann, L. M., Risgaard-Petersen, N., Schrum, H., Walsh, E. A., Huh, Y., Ikehara, M., Pierre, C., D’Hondt, S., Ferdelman, T. G., Ravelo, A. C., Takahashi, K. & Zarikian, C. A. (2011). Coupled organic and inorganic carbon cycling in the deep subseafloor sediment of the northeastern Bering Sea Slope (IODP Exp. 323). Chemical Geology, 284(3-4), 251-261 . https://doi.org/10.1016/j.chemgeo.2011.03.002
Wehrmann, L. M., Riedinger, N., Brunner, B., Kamyshny, A., Hubert, C. R. J., Herbert, L. C., Bruechert, V., Jorgensen, B. B., Ferdelman, T. G. & Formolo, M. J. (2017). Iron-controlled oxidative sulfur cycling recorded in the distribution and isotopic composition of sulfur species in glacially influenced fjord sediments of west Svalbard. Chemical Geology, 466, 678-695. https://doi.org/10.1016/j.chemgeo.2017.06.013
Weegman, M. D., Fox, A. D., Hilton, G. M., Hodgson, D. J., Walsh, A. J., Griffin, L. R. & Bearhop, S. (2017). Diagnosing the decline of the Greenland White-fronted Goose Anser albifrons flavirostris using population and individual level techniques. Wildfowl, 67, 3-18.
Webster-Brown, J., Hawes, I., Safi, K., Sorrell, B. K. & Wilson, N. (2012). Summer-winter transitions in Antarctic ponds: III. Chemical changes. Antarctic Science, 24(2), 121-130.
Weber, R. (2004). The amazing world of hemoglobins. Paper presented at 23rd ESCPB Conference, Cesenatico, Italy, 23-26 September.
Weber, R. (2004). Thermodynamics of O2 binding to invertebrate respiratory pigments. Paper presented at Cesenatico, Italy, 23-26 September.
Weber, R. E. (2004). Ecophysiological adaptations in oxygen-binding globin proteins. In Riggs Fest Symposium Adventures in Hemoglobin Research. Austin, Texas, 12-13 November, 2004
Weber, R. E., Fago, A., Bang, A., Voelter, W. & Low, S. P. (2004). Regulation of red cell glycolysis: interactions between vertebrate hemoglobins and band 3 red cell membrane proteins. Paper presented at International Symposium on Animal Physiology, Biotechnikum Greifswald, 3-5 June, 2004.
Weber, R. E., Voelter, W., Fago, A., Echner, H., Campanella, E. & Low, P. S. (2004). Modulation of red cell glycolysis: interactions between vertebrate hemoglobins and cytoplasmic domains of band 3 red cell membrane proteins. Am. J. Physiol. Regul. Integr. Comp. Physiol., 287, 454-464.
Weber, R. E., Fago, A. & Low, P. S. (2005). Vertebrate hemoglobins - possible roles in mediating oxygenation dependence of red cell metabolism and rheology. Abstracts / Comparative Biochemistry and Physiology, Part A, 141, S187.
Weber, R. E., Bang, A., Voelter, W. & Weber, R. E. (2001). Interactions between hemoglobin and band 3 red cell membrane peptides. Abstract. Europ. J. Physiol.(Plugers Archiv)Suppl., 441(6), r224.
Weber, R. E. (2006). Adaptive modulation of temperature sensitivity in vertebrate haemoglobins. In XIV International Conference on Dioxygen Binding and Sensing Proteins - Stazione Zoologica Anton Dohrn, Naples - September 3-7, 2006 (pp. 52)
Weber, R. E. (2006). Molecular physiological adaptations of vertebrate hemoglobins at high altitute. In First International Congress of Respiratory Biology ICRB. - Bonn/Bad Honnef, August 13th  - August 16th, 2006 (pp. 43)