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Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Kristensen, L. M. & Mailund (2003). Efficient Path Finding with the Sweep-Line Method using External Storage. In Proceedings of International Conference on Formal Engineering Methods (ICFEM 2003) (pp. 319-337)
Mailund, T. & Westergaard, M. (2004). Obtaining Memory-Efficient Reachability Graph Representations Using the Sweep-Line Method. In Proceedings of Tools and Algorithms for the Construction and Analysis of Systems (TACAS 2004) (pp. 177-191)
Mailund, Pedersen, C. N. S., Bardino, J., Vinter, B. & Karlsen, H. H. (2005). Initial experiences with GeneRecon on MiG. In Proceedings of The 2005 International Conference on Grid Computing and Applications (GCA)
Christiansen, C., Mailund, Pedersen, C. N. S. & Randers, M. (2005). Quartet Distance between General Trees. In Proceedings of International Conference on Numerical Analysis and Applied Mathematics (ICNAAM) (pp. 796-799)
Christiansen, C., Mailund, Pedersen, C. N. S. & Randers, M. (2005). Computing the Quartet Distance between Trees of Arbitrary Degree. In Proceedings of the 5th International Workshop on Algorithms in Bioinformatics (WABI) (pp. 77-88)
Billington, J., Gallasch, G. E., Kristensen, L. M. & Mailund (2004). Exploiting Equivalence Reduction and the Sweep-Line Method for Detecting Terminal States. IEEE Transactions on Systems, Man, and Cybernetics Part A:Systems and Humans, 34(1), 23-37.
Besenbacher, S., Mailund, Westh-Nielsen, L. & Pedersen, C. N. S. (2005). RBT—A Tool for Building Refined Buneman Trees. Bioinformatics, 21(8), 1711-1712.
Wernersson, R., Schierup, M. H., Jørgensen, F. G., Gorodkin, J., Panitz, F., Staerfeldt, HH., Christensen, O. F., Mailund, T., Hornshøj, H., Klein, A., Jun, W., Liu, B., Hu, S., Dong, W., Li, W., Wong, GK.-S., Yu, J., Wang, J., Bendixen, C. ... Bolund, L. (2005). Pigs in Sequence Space: A 0.66X Coverage Pig Genome Survey based on Shotgun Sequencing. BMC Genomics, 6(70). http://www.biomedcentral.com/1471-2164/6/70
Mailund, Brodal, G. S., Fagerberg, R., Pedersen, C. N. S. & Phillips, D. (2006). Recrafting the Neighbor-Joining Method. BMC Bioinformatics, 7(29).
Hankeln, T., Ebner, B., Fuchs, C., Gerlach, F., Haberkamp, M., Laufs, T. L., Roesner, A., Schmidt, M., Weich, B., Wystub, S., Saaler-Reinhardt, S., Reuss, S., Bolognesi, M., De Sanctis, D., Marden, M. C., Kiger, L., Moens, L., Dewilde, S., Nevo, E. ... Burmester, T. (2005). Neuroglobin and cytoglobin in search of their role in the vertebrate globin family. Journal of Inorganic Biochemistry, 99, 110-119.
Herold, S. & Fago, A. (2005). Reactions of peroxynitrite with globin proteins and their possible physiological role. Comp. Biochem. Physiol., Part A., 142, 124-129.
Tengberg, A., Hall, P. O. J., Andersson, U., Lindén, B., Styrenius, O., Boland, G., de Bovee, F., Carlsson, B., Ceradini, S., Devol, A., Duivenveld, G., Friemann, J.-U., Glud, R. N., Khripounoff, A., Leather, J., Linke, P., Lund-Hansen, L. C., Rowe, G., Santschi, P. ... Witte, U. (2005). Intercalibration of benthic flux chambers. II. Hydrodynamic characterization and flux comparisons of 14 different designs. Mar. Chem., 94, 147-173.
Lundgren, R. & Olesen, J. M. (2005). The dense and highly connected world of Greenland plants and their pollinators. Arctic, Antarctic, and Alpine Research, 37, 514-520.
Møller, J. S. (2006). On the essential spectrum of the translation invariant Nelson model. In Mathematical Physics of Quantum Mechanics, Selected and Refereed Lectures from QMath9" (Lecture Notes in Physics Vol 690 ed., pp. 179-195). Springer.
Møller, J. S. (2000). Two-body short-range systems in a time-periodic electric field. Duke Mathematical Journal, 105, 135-166.
Nielsen, H. & Wistoft, B. (1998). Painting Technological Progress: P.S. Krøyer's The Industrialists (1904). Technology and Culture, 39(3), 408-433.
Nielsen, H., Nielsen, K., Petersen, F. & Jensen, H. S. (1998). Til samfundets tarv - Forskningscenter Risøs historie. Danmarks Tekniske Universitet, Risø Nationallaboratoriet for Bæredygtig Energi.
Nielsen, H., Petersen, F., Jensen, H. S. & Nielsen, K. (1999). Risø and the Attempts to Introduce Nuclear Power into Denmark. Centaurus (Copenhagen), 41, 64-92.
Nielsen, H. (2002). Exposing the Flaws in the Nobel facade. Physics World, 15(4), 46-47.
Nielsen, H. & Nielsen, K. (2000). Le porte de la gloire. Les Cahiers de Science & Vie, 38-42.
Nielsen, H., Nielsen, K., Petersen, F. & Jensen, H. S. (1998). Risø National research - Forty Years of Research in a Changing Society. Risø National laboratory.
Nielsen, H. & Clark, M. H. (1998). The Telegraphone. In E. D. Daniel, C. D. Mee & M. H. Clark (Eds.), Magnetic Recording: The First 100 Years (pp. 15-29). IEEE Press.
Nielsen, H. (1999). Telegrafonen - en opfindelse dømt til at mislykkes? Årbog / Danmarks Tekniske Museum, 6-25.
Nielsen, H. & Nielsen, K. (1999). The Danish Nobel Project. Newsletter of the Nobel Museum, 5-6.
Nielsen, H. (2005). Teknologi og samfund. In M. Hansen (Ed.), Almen Studieforberedelse - Videnskabernes temaer og historie (pp. 161-174). Gyldendal.
Nielsen, H., Nielsen, K. & Siggard Jensen, H. (2005). Skruen uden ende - Den vestlige teknologis historie. (3. ed.) Nyt Teknisk Forlag.
Jantzen, J. C. & Schwermer, J. (2005). Algebra. Springer.
Møller, J. S. (1993). Second quantization in a quon-algebra. J. Phys. A., 26, 4643-4652.
Herbst, I., Møller, J. S. & Skibsted, E. (1995). Spectral analysis of N-body Stark Hamiltonians. Communications in Mathematical Physics, 174, 261-294.
Herbst, I., Møller, J. S. & Skibsted, E. (1996). Asymptotic completeness for N-body Stark Hamiltonians. Communications in Mathematical Physics, 174, 509-535.
Brynskov, M. & Andersen, P. B. (2004). Habitats, Activities, and Signs. In J. Filipe & K. Liu (Eds.), Proceedings of The 7th International Workshop on Organisational Semiotics. (pp. 128-151). Institute for Systems and Technologies of Information, Control and Communication.
Arentoft, T., Bouzid, M. Y., Sterken, C., Freyhammer, L. M. & Frandsen, S. (2005). A dozen delta Scuti stars in the open cluster NGC 1817. PASP, 117(832), 601-614.
Andersen, L. W., Simonsen, V., Søgaard, B., Madsen, A. B., Pertoldi, C., Wind, P., Pihl, S., Fog, K. & Damgaard, C. F. (2005). Anvendelse af molekylærgenetiske markører i naturforvaltningen: Faglig rapport fra DMU, nr. 539.

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Lopez, J. A., Corredor, S. M., Arias, C. A. & Chaparro, T. R. (2025). Treatment of Dairy Wastewater Using Aerated Wetlands. Air, Soil and Water Research, 18. https://doi.org/10.1177/11786221251369494
Lykke, A. M., Rømer, N., Gonzalez, P., Glèlè Kakaï, R., Rabiou, H., Amegnaglo, K. B., Ganaba, S., Sambou, B., Niang, F., Herault, B., Guuroh, R. T., Ouoba, P., Yaméogo, J. T., Traoré, L., Sinsin, B., Amahowe, O. I., Bay, S. S., Houehanou, T. D., Houessou, L. G. ... Barfod, A. S. (2025). Tree populations show low regeneration of valued species in West Africa. Biological Conservation, 301, Article 110891. https://doi.org/10.1016/j.biocon.2024.110891
Worm, J., Jørgensen, I. F., Davídsson, Ó. B., Hjalgrim, H., Röder, T., Ostrowski, S. R., Pedersen, O. B., Erikstrup, C., Bruun, M. T., Jensen, B. A., Sørensen, E., Ullum, H., Björnsdóttir, G., Thorgeirsson, T., Stefánsson, H., Sveinsson, Ó. Á., Stefansson, K., Schytz, H. W., Bendtsen, L. ... Westergaard, D. (2025). Trigeminal neuralgia and its comorbidities: A nationwide disease trajectory study. Pain, 166(4), 879-887. https://doi.org/10.1097/j.pain.0000000000003428
Thomassen, E. S. (2025). Trophic rewilding investigated with environmental DNA. [PhD dissertation, Aarhus University]. Aarhus Universitet.
Mederer, D., Kattenborn, T., Cherif, E., Guimaraes-Steinicke, C., Joswig, J. S., Schneider, F. D. & Feilhauer, H. (2025). Unraveling the seasonality of functional diversity through remote sensing. Communications Earth and Environment, 6(1), Article 790. https://doi.org/10.1038/s43247-025-02646-x
Mendes, S. B., Olesen, J. M., Nogales, M., Marrero, P., Romero, J., Nieves, C. & Heleno, R. (2025). Urbanization of seed dispersal networks. Conservation Biology, 39(6), Article e70097. https://doi.org/10.1111/cobi.70097
Zurita, F., Vera-Puerto, I. L., Maine, A., Arias, C. & Sandoval Herazo, L. C. (2025). Use of constructed wetlands in Latin America: Assessment of current status, opportunities and challenges in Mexico, Chile and Argentina. Journal of Environmental Management, 395, Article 127900. https://doi.org/10.1016/j.jenvman.2025.127900
Vandsø, A., Leth-Espensen, P., Barfod, A. S., Oelsner, G. & Shepherd, N. (2025). Verden i Vindueskarmen. In Plantefeber: Verden i vindueskarmen (pp. 14-25). Aarhus Universitetsforlag.
Stidsholt, L., Zebele, M., Scholz, C. & Voigt, C. C. (2025). Wild bats hunt insects faster under lit conditions by integrating acoustic and visual information. Proceedings of the National Academy of Sciences of the United States of America, 122(37), Article e2515087122. https://doi.org/10.1073/pnas.2515087122
Hansen, K., Karlsson, N. B., How, P., Poulsen, E., Mortensen, J. & Rysgaard, S. (2025). Winter subglacial meltwater detected in a Greenland fjord. Nature Geoscience, 18(3), 219-225. Article 3256. https://doi.org/10.1038/s41561-025-01652-0
Clauss, M., Roller, M., Bertelsen, M. F., von Rohr, C. R., Müller, D. W. H., Schiffmann, C., Kummrow, M., Encke, D., Ferreira, S., Duvall, E. S., Maré, C. & Abraham, A. J. (2025). Zoos must embrace animal death for education and conservation. Proceedings of the National Academy of Sciences of the United States of America, 122(1), Article e2414565121. https://doi.org/10.1073/pnas.2414565121
Riekenberg, P. M., Ijsseldiek, L. L., Leopold, M. F., Christensen, J. T., Gröne, A. & van der Meer, M. T. J. (2024). A 75-year record of North Sea food web dynamics based on the stable nitrogen isotopic composition of amino acids from harbor porpoise (Phocoena phocoena).. Abstract from 2024 Ocean Sciences Meeting, New Orleans, Louisiana, United States. https://agu.confex.com/agu/OSM24/meetingapp.cgi/Paper/1475152
Berlinghof, J., Montilla, L. M., Peiffer, F., Quero, G. M., Marzocchi, U., Meador, T. B., Margiotta, F., Abagnale, M., Wild, C. & Cardini, U. (2024). Accelerated nitrogen cycling on Mediterranean seagrass leaves at volcanic CO2 vents. Communications Biology, 7(1), Article 341. https://doi.org/10.1038/s42003-024-06011-0
Zahn, M. J., Ladegaard, M., Simon, M., Stafford, K. M., Sakai, T. & Laidre, K. L. (2024). Accurate species classification of Arctic toothed whale echolocation clicks using one-third octave ratios. The Journal of the Acoustical Society of America, 155(4), 2359-2370. https://doi.org/10.1121/10.0025460
Freitas, G. P., Kojoj, J., Mavis, C., Creamean, J., Mattsson, F., Nilsson, L., Schmidt, J. S., Adachi, K., Šantl-Temkiv, T., Ahlberg, E., Mohr, C., Riipinen, I. & Zieger, P. (2024). A comprehensive characterisation of natural aerosol sources in the high Arctic during the onset of sea ice melt. Faraday Discussions, 258, 120-146. https://doi.org/10.1039/d4fd00162a
Kalusová, V., Čeplová, N., Danihelka, J., Večeřa, M., Pyšek, P., Albert, A., Anastasiu, P., Biurrun, I., Boch, S., Cottaz, C., Essl, F., Kuzemko, A., Maslo, S., Mifsud, S., Protopopova, V. V., Shevera, M., Sîrbu, C., Svenning, J. C., Welk, E. & Axmanová, I. (2024). Alien plants of Europe: an overview of national and regional inventories. Preslia, 96(2), 149-182. https://doi.org/10.23855/preslia.2024.149
McGeoch, M. A., Clarke, D. A., Mungi, N. A. & Ordonez, A. (2024). A nature-positive future with biological invasions: theory, decision support and research needs. Philosophical Transactions of the Royal Society B: Biological Sciences, 379(1902), Article 20230014. https://doi.org/10.1098/rstb.2023.0014
Aticho, A., Beyene, A., Aynalem Zelelew, S., Puok, C., Mekonnen Gutema, T., Christian Svenning, J. & Chala, D. (2024). A neglected wetland in human-dominated landscape shields avifauna from seasonal harsh conditions in Gambella, western Ethiopia. Journal for Nature Conservation, 81, Article 126694. https://doi.org/10.1016/j.jnc.2024.126694
Magneville, C., Brissaud, C., Fleuré, V., Loiseau, N., Claverie, T. & Villéger, S. (2024). A new framework for estimating abundance of animals using a network of cameras. Limnology and Oceanography: Methods, 22(4), 268-280. https://doi.org/10.1002/lom3.10606
Wooster, E. I. F., Gaynor, K. M., Carthey, A. J. R., Wallach, A. D., Stanton, L. A., Ramp, D. & Lundgren, E. J. (2024). Animal cognition and culture mediate predator–prey interactions. Trends in Ecology and Evolution, 39(1), 52-64. https://doi.org/10.1016/j.tree.2023.09.012
Puleo, P. J. K., Akers, P. D., Kopec, B. G., Welker, J. M., Bailey, H., Osburn, M. R., Riis, T. & Axford, Y. (2024). Aquatic moss δ18O as a proxy for seasonally resolved lake water δ18O, northwest Greenland. Quaternary Science Reviews, 334, Article 108682. https://doi.org/10.1016/j.quascirev.2024.108682
Bundgaard, A., Borowiec, B. G. & Lau, G. Y. (2024). Are reactive oxygen species always bad? Lessons from hypoxic ectotherms. Journal of Experimental Biology, 227(6), Article jeb246549. https://doi.org/10.1242/jeb.246549
Trojan, D., García-Robledo, E., Hausmann, B., Revsbech, N. P., Woebken, D. & Eichorst, S. A. (2024). A respiro-fermentative strategy to survive nanoxia in Acidobacterium capsulatum. FEMS Microbiology Ecology, 100(12), Article fiae152. https://doi.org/10.1093/femsec/fiae152