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Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Schneider, B. I. & Nygaard, N. (2002). Orthogonal functions, discrete variable representation, and generalized gauss quadratures. Journal of Physical Chemistry Part A: Molecules, Spectroscopy, Kinetics, Environment and General Theory, 106, 10773.
Nygaard, N., Bruun, G. M., Schneider, B. I., Clark, C. W. & Feder, D. L. (2004). Vortex line in a neutral finite-temperature superfluid Fermi gas. Physical Review A, 69, 053622.
Williams, J. E., Nygaard, N. & Clark, C. W. (2004). Phase diagrams for an ideal gas mixture of fermionic atoms and bosonic molecules. New J. Phys., 6, 123.
Williams, J. E., Nikuni, T., Nygaard, N. & Clark, C. W. (2004). Atom-molecule equilibration in a degenerate Fermi gas with resonant interactions. Journal of Physics B: Atomic, Molecular and Optical Physics, L351.
Schneider, B. I. & Nygaard, N. (2004). Discrete variable representation for singular Hamiltonians. Physical Review E, 70, 056706.
Morales, M. A., Nygaard, N., Williams, J. E. & Clark, C. W. (2005). Ultracold fermion cooling cycle using heteronuclear Feshbach resonances. New J. Phys., 7, 87.
Kistner, C., Winzer, T., Pizschke, A., Mulder, L., Sati, S., Kaneko, T., Tabata, S., Sandal, N. N., Stougaard, J., Webb, K. J., Szczyglowski, K. & Parniske, M. (2005). Seven Lotus japonicus genes required for transcriptional reprogramming of the root during fungal and bacterial symbiosis. Plant Cell, 17, 1-13.
Oblak, D., Petrov, P. G., Garrido Alzar, C. L., Tittel, W., Vershovski, A. K., Mikkelsen, J. K., Sørensen, J. L. & Polzik, E. S. (2005). Quantum-noise-limited interferometric measurement of atomic noise: Towards spin squeezing on the Cs clock transition. Physical Review A, 71, 043807.
Williams, J. E., Nygaard, N. & Clark, C. W. (2006). Theory of Feshbach molecule formation in a dilute gas during a magnetic field ramp. New Journal of Physics, 8(150).
Nygaard, N., Schneider, B. I. & Julienne, P. S. (2006). A two-channel R-matrix analysis of magnetic field induced Feshbach resonances. Physical Review A, 74, 042705.
Nygaard, N. (2005). Bose-Einstein Kondensation: Når atomer synger i kor. Kvant: Tidsskrift for Fysik og Astronomi, 1, 29.
Nygaard, N. (1999). Fysikkens varme emne. Berlingske Tidende.
Nygaard, N. (2001). Verdens mindste ekplosion. Berlingske Tidende.
Nygaard, N. (2001). Smukt eksperiment – Nobelpris. Berlingske Tidende.
Bødker, S. & Andersen, P. B. (2005). Complex Mediation. Journal of Human Computer Interaction, 20(4), 353-402.
Bødker, S. & Christiansen, E. (2006). Computer support for social awareness in flexible work. Computer Supported Cooperative Work (CSCW): The Journal of Collaborative Computing and Work Practices, 15(1), 1-28.
Bødker, S. & Petersen, A. B. (2005). Mediating the co-production of complex media products. Poster session presented at International ACM SIGGROUP Conference on Supporting Group Work, Sanibel Island, United States.
Biernacka, M., Danvy, O. & Sørensen, K. S. (2005). Extracting Evaluators from Proofs of Weak Head Normalization. In Electronic Notes in Theoretical Computer Science Elsevier Science Publishers.
Brodal, G. S., Demaine, E. D. & Munro, J. I. (2005). Fast Allocation and Deallocation with an Improved Buddy System. Acta Informatica, 41(4-5), 273-291. https://doi.org/10.1007/s00236-004-0159-6
Brodal, G. S., Fagerberg, R. & Moruz, G. (2005). On the Adaptiveness of Quicksort. In ALENEX05 (pp. 130-140). Society for Industrial and Applied Mathematics.
Arge, L., Brodal, G. S., Fagerberg, R. & Laustsen, M. (2005). Cache-Oblivious Planar Orthogonal Range Searching and Counting. In Proceedings of the twenty-first annual symposium on Computational geometry (pp. 160-169). Association for Computing Machinery. https://doi.org/10.1145/1064092.1064119
Brodal, G. S., Fagerberg, R. & Moruz, G. (2005). Cache-Aware and Cache-Oblivious Adaptive Sorting. In L. Caires, G. F. Italiano, L. Monteiro, C. Palamidessi & M. Yung (Eds.), Automata, Languages and Programming: 32nd International Colloquium, ICALP 2005, Lisbon, Portugal, July 11-15, 2005. Proceedings (pp. 576-588). Springer. https://doi.org/10.1007/11523468_47
Brodal, G. S. & Moruz, G. (2005). Tradeoffs Between Branch Mispredictions and Comparisons for Sorting Algorithms. In F. Dehne, A. Lopez-Ortiz & J.-R. Sack (Eds.), Algorithms and Data Structures: 9th International Workshop, WADS 2005, Waterloo, Canada, August 15-17, 2005. Proceedings (pp. 385-395). Springer. https://doi.org/10.1007/11534273_34
Brodal, G. S. & Fagerberg, R. (2006). Cache-oblivious String Dictionaries. In SODA '06 Proceedings of the seventeenth annual ACM-SIAM symposium on Discrete algorithm (pp. 581-590). Association for Computing Machinery. https://doi.org/10.1145/1109557.1109621
Brodal, G. S. (2005). Finger Search Trees. In D. Mehta & S. Sahni (Eds.), Handbook of Data Structures and Applications CRC Press.
Arge, L., Brodal, G. S. & Fagerberg, R. (2005). Cache-Oblivious Data Structures. In D. Mehta & S. Sahni (Eds.), Handbook of Data Structures and Applications CRC Press.
Brodal, G. S. & Leonardi, S. (Eds.) (2005). ESA 2005: 13th Annual European Symposium: Springer LNCS.
Møller, A. & Schwartzbach, M. I. (2005). The Design Space of Type Checkers for XML Transformation Languages. In Database Theory - ICDT 2005: 10th International Conference, Edinburgh, UK, January 5-7, 2005. Proceedings (pp. 17-36). Springer. https://doi.org/10.1007/978-3-540-30570-5_2
Kristoffersen, T. K. (2006). Deviation measure in two-stage stochastic linear programming. Mathematical Methods of Operations Research, 62(2), 255-274.
Svenning, J.-C., Sanjines A., A., Normand, S., Vormisto, J. & Balslev, H. (2005). Environmental and spatial controls of palm (Arecaceae) species distributions at local to regional scales in neotropical forests. Poster session presented at The Palms - An International Symposium on the Biology of the Palm Family, The Linnean Society and The Royal Botanic Gardens, London and Kew, United Kingdom.
Bjorholm, S. W., Svenning, J.-C., Skov, F. & Balslev, H. (2006). Which factors control the distribution of palms in the Americas?. Poster session presented at ISOBIS Annual Meeting, 2006, Copenhagen, Denmark.
Knudsen, H. (2003). Til Nationens Dygtiggørelse: - den tekniske forskning mellem stat, industri og privat filantropi 1916-1937. Erhvervshistorisk årbog: meddelelser fra Erhvervsarkivet, 52, 48-97.
Knudsen, H. (2006). Politik, penge og forskningsvilkår. In Videnskab uden grænser: Dansk Naturvidenskabs Historie, Bind 4 (Vol. 4, pp. 262-279). Aarhus Universitetsforlag.
Knudsen, H. & Nielsen, K. H. (2006). Forskning uden for universiteterne. In H. Nielsen & K. Hvidtfelt Nielsen (Eds.), Viden uden grænser 1920-1970: Dansk Naturvidenskabs Historie, Bind 4 (Vol. 4, pp. 259-79). Aarhus Universitetsforlag.
Knudsen, H. (1999). Pandoras Æske: Anmeldelse af "Verden om tænkningen", Philosophia årg. 25, 3-4. Slagmark: tidsskrift for idéhistorie , (28-29), 191-194.
Bardram, J. E., Kjær, R. E. & Pedersen, M. Ø. (2003). Context-Aware User Authentication - Supporting Proximity-Based Login in Pervasive Computing. In Proceedings of Ubicomp 2003: Ubiquitous Computing (2864 ed., pp. 107-123). Springer.
Bahner, K. (2005). Design of a High Precision Control System. In Design of a High Precision Control System McMaster University.
Bahner, K. (2005). Report to SNEAP 2004. In Report to SNEAP 2004 McMaster Univeristy.
Bødker, S. & Nielsen, M. M. (2004). Desktop Computing. Australian Journal of Information Systems, 88-101.

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Carruthers, T., Moerland, M. S., Ebersbach, J., Favre, A., Folk, R. A., Hawkins, J. A., Muellner-Riehl, A. N., Röser, M., Soltis, D. E., Tkach, N., Baker, W. J., de Vos, J. M. & Eiserhardt, W. L. (2024). Repeated upslope biome shifts in Saxifraga during late-Cenozoic climate cooling. Nature Communications, 15(1), Article 1100. https://doi.org/10.1038/s41467-024-45289-w
Duvall, E. S., le Roux, E., Pearson, H. C., Roman, J., Malhi, Y. & Abraham, A. J. (2024). Resisting the carbonization of animals as climate solutions. Nature Climate Change, 14(9), 892-895. https://doi.org/10.1038/s41558-024-02106-y
Knollová, I., Chytrý, M., Bruelheide, H., Dullinger, S., Jandt, U., Bernhardt-Römermann, M., Biurrun, I., de Bello, F., Glaser, M., Hennekens, S., Jansen, F., Jiménez-Alfaro, B., Kadaš, D., Kaplan, E., Klinkovská, K., Lenzner, B., Pauli, H., Sperandii, M. G., Verheyen, K. ... Essl, F. (2024). ReSurveyEurope: A database of resurveyed vegetation plots in Europe. Journal of Vegetation Science, 35(2), Article e13235. https://doi.org/10.1111/jvs.13235
Delle Grazie, F. M., Dalgaard, T., Butterbach-Bahl, K. & Hutchings, N. (2024). Review of whole-farm models for accurate nitrogen budgets. In Proceedings of the XXII International Nitrogen Workshop: Resolving the Global Nitrogen Dilemma - Opportunities and Challenges (pp. 199) https://conferences.au.dk/fileadmin/conferences/2024/nworkshop/Book_of_abstracts_NW2024.pdf
Gao, Y., Zhao, B., Saintilan, N., Chen, J., Wu, W., Wen, L., Zhao, F., Zhang, T., Geng, Z., Yang, G., Song, C. & Zhuang, P. (2024). Rooting meta-ecosystems with reciprocal lateral carbon and nitrogen flows in a Yangtze coastal marsh. Environmental Research Letters, 19(10), Article 104056. https://doi.org/10.1088/1748-9326/ad73ea
Attard, K., Singh, R. K., Gattuso, J.-P., Filbee-Dexter, K., Krause-Jensen, D., Kühl, M., Sejr, M. K., Archambault, P., Babin, M., Bélanger, S., Berg, P., Glud, R. N., Hancke, K., Jänicke, S., Qin, J., Rysgaard, S., Sørensen, E. B., Tachon, F., Wenzhöfer, F. & Ardyna, M. (2024). Seafloor primary production in a changing Arctic Ocean. Proceedings of the National Academy of Sciences (PNAS), 121(11), Article e2303366121. https://doi.org/10.1073/pnas.2303366121
Jensen, L. Z. (2024). Seasonal Sources of Biogenic Ice Nucleation Particles in the Arctic. [PhD dissertation, Aarhus University]. Aarhus University.
Ortego, J., Albrecht, M., Báldi, A., Bilde, T., Craig, S. B. B., Herrera, J. M., Hood, A. S. C., Kleijn, D., Maurer, C., Molina, F. P., Öckinger, E., Potts, S. G., Settepani, V., Thomsen, P. F., Trillo, M., Vajna, F., Velado-Alonso, E. & Bartomeus, I. (2024). Seminatural areas act as reservoirs of genetic diversity for crop pollinators and natural enemies across Europe. Conservation Science and Practice, 6(5), Article e13080. https://doi.org/10.1111/csp2.13080
Crossley, D. A., Crossley, J. L., Conner, J. L., Smith, B., Elsey, R., Nelson, D. & Wang, T. (2024). Short communication: Characterizing arterial and venous blood gases over the gas exchange surface, the chorioallantoic membrane, of embryonic American alligators (Alligator mississippiensis) at two points of development. Comparative Biochemistry and Physiology -Part A : Molecular and Integrative Physiology, 290, Article 111575. https://doi.org/10.1016/j.cbpa.2024.111575
Christensen, N. K., Beedholm, K. & Damsgaard, C. (2024). Short communication: Maintained visual performance in birds under high altitude hypoxia. Comparative Biochemistry and Physiology -Part A : Molecular and Integrative Physiology, 296, Article 111691. https://doi.org/10.1016/j.cbpa.2024.111691
Scharling, F. S., Sandgreen, D. M., Stagegaard, J., Elbrønd, V. S., Vincenti, S., Isaksen, J. L., Wang, T., Wilson, R. P., Gunner, R., Marks, N., Bell, S. H., van Rooyen, M. C., Bennett, N. C., Hart, D. W., Daly, A. C., Bertelsen, M. F., Scantlebury, D. M., Calloe, K. & Thomsen, M. B. (2024). Short QT intervals in African lions. Experimental Physiology, 109(12), 2088-2099. https://doi.org/10.1113/EP092203
Cui, Y., Moreira, M. D. A., Whalen, K. E., Barbe, L., Shi, Q., Koren, K., Tenje, M. & Behrendt, L. (2024). SlipO2Chip - single-cell respiration under tuneable environments. Lab on a Chip, 24(20), 4786-4797. https://doi.org/10.1039/d4lc00420e
Gargiulo, S., Boscutti, F., Carrer, M., Prendin, A. L., Unterholzner, L., Dibona, R. & Casolo, V. (2024). Snowpack permanence shapes the growth and dynamic of non-structural carbohydrates in Juniperus communis in alpine tundra. Science of the Total Environment, 948, Article 174891. https://doi.org/10.1016/j.scitotenv.2024.174891
Szabo, A., Bejder, L., Warick, H., Van Aswegen, M., Friedlaender, A. S., Goldbogen, J., Kendall-Bar, J. M., Leunissen, E. M., Angot, M. & Gough, W. T. (2024). Solitary humpback whales manufacture bubble-nets as tools to increase prey intake. Royal Society Open Science, 11(8), Article 240328. https://doi.org/10.1098/rsos.240328
Meyerson, L. A., Cronin, J. T., Lučanová, M., Lambertini, C., Brix, H., Packer, J. G., Čuda, J., Wild, J., Pergl, J. & Pyšek, P. (2024). Some like it hot: small genomes may be more prevalent under climate extremes. Biological Invasions, 26(5), 1425-1436. https://doi.org/10.1007/s10530-024-03253-1
Tuomisto, H., Suominen, L., Alonso, A., Cárdenas, G., Lehtonen, S., Moulatlet, G. M., Pérez, E., Sirén, A., Weigelt, P. & Zuquim, G. (2024). Species–soil relationships across Amazonia: Niche specificity and consistency in understorey ferns. Journal of Vegetation Science, 35(5), Article e13307. https://doi.org/10.1111/jvs.13307
Goodrich, H. R., Wood, C. M., Wilson, R. W., Clark, T. D., Last, K. B. & Wang, T. (2024). Specific dynamic action: the energy cost of digestion or growth? Journal of Experimental Biology, 227(7), Article jeb246722. https://doi.org/10.1242/jeb.246722
Xiang, Q., Stryhanyuk, H., Schmidt, M., Kümmel, S., Richnow, H. H., Zhu, Y. G., Cui, L. & Musat, N. (2024). Stable isotopes and nanoSIMS single-cell imaging reveals soil plastisphere colonizers able to assimilate sulfamethoxazole. Environmental Pollution, 355, Article 124197. https://doi.org/10.1016/j.envpol.2024.124197
Christoffersen, S. N., Pertoldi, C., Sørensen, J. G., Kristensen, T. N., Bruhn, D. & Bahrndorff, S. (2024). Strong acclimation effect of temperature and humidity on heat tolerance of the Arctic collembolan Megaphorura arctica. Journal of Experimental Biology, 227(12), Article jeb247394. https://doi.org/10.1242/jeb.247394
Jin, L., Liu, J. J., Li, Q. M., Lin, L. X., Shao, X. N., Xiao, T. W., Li, B. H., Mi, X. C., Ren, H. B., Zhu, Y., Qiao, X. J., Lian, J. Y., Wang, X. G., Du, H., Jin, G. Z., Svenning, J. C., Hao, G. & Ge, X. J. (2024). Stronger latitudinal phylogenetic patterns in woody angiosperm assemblages with higher dispersal abilities in China. Journal of Biogeography, 51(2), 269-279. https://doi.org/10.1111/jbi.14746
Maraia, H., Charles-Dominique, T., Tomlinson, KW., Staver, AC., Jorge, LR., Gélin, U., Jancuchova-Laskova, J., Sam, L., Hattas, D., Freiberga, I. & Sam, K. (2024). Substantial Insect Herbivory in a South African Savanna-Forest Mosaic: A Neglected Topic. Ecology and Evolution, 14(11), Article e70466. https://doi.org/10.1002/ece3.70466
Abraham, A. J., Doughty, C. E., Plummer, K. E. & Duvall, E. S. (2024). Supplementary bird feeding as an overlooked contribution to local phosphorus cycles. Frontiers in Ecology and the Environment, 22(9), Article e2793. https://doi.org/10.1002/fee.2793
Bretman, A., Fricke, C., Baur, J., Berger, D., Breedveld, M. C., Dierick, D., Canal Domenech, B., Drobniak, S. M., Ellers, J., English, S., Gasparini, C., Iossa, G., Lagisz, M., Nakagawa, S., Noble, D. W. A., Pottier, P., Ramm, S. A., Rowe, M., Schultner, E. ... Snook, R. R. (2024). Systematic approaches to assessing high-temperature limits to fertility in animals. Journal of Evolutionary Biology, 37(4), 471-485. https://doi.org/10.1093/jeb/voae021
Crossley, D. A., Crossley, J. L., Conner, J. L., Smith, B., Elsey, R., Nelson, D. & Wang, T. (2024). Temperature effects on blood gases in embryonic American alligators (Alligator mississippiensis). Comparative Biochemistry and Physiology -Part A : Molecular and Integrative Physiology, 297, Article 111733. https://doi.org/10.1016/j.cbpa.2024.111733