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Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Jørgensen, B. B., Holmkvist, L. & Ferdelman, T. G. (2011). A cryptic sulfur cycle driven by iron in the methane zone of marine sediment (Aarhus Bay, Denmark). Abstract from EGU General Assembly, Vienna, Austria.
Holmkvist, L., Ferdelman, T. G. & Jørgensen, B. B. (2011). A cryptic sulfur cycle driven by iron in the methane zone of marine sediment (Aarhus Bay, Denmark). Geochimica et Cosmochimica Acta, 75(12), 3581-3599.
Canfield, D. E., Stewart, F. J., Thamdrup, B., De Brabandere, L., Dalsgaard, T., Delong, E. F., Revsbech, N. P. & Ulloa, O. (2010). A cryptic sulfur cycle in oxygen-minimum-zone waters off the Chilean Coast. Science, 330(6009), 1375-1378. https://doi.org/10.1126/science.1196889
Alonso, C., Gurney, R. W., Eliash, R., Hong, S., Shen, Y. R., Jensen, T. R., Kjaer, K., Konovalov, O., Lahav, M. & Leiserowitz, L. (2003). A Crystalline Langmuir Monolayer Designed as a Template for Selective Intercalation of Water Soluble a-Amino Acids. Cryst Growth Des, 3, 683-690. http://pubs.acs.org/cgi-bin/abstract.cgi/cgdefu/2003/3/i05/abs/cg034033c.html
Palmqvist, A. E. C., Iversen, B. B., Zanghellini, E., Behm, M. & Stucky, G. D. (2004). A Crystalline Microporous Narrow-Bandgap Semiconductor. Angewandte Chemie International Edition, 43, 699-704.
Rickhag, K. M., Hansen, F. H., Sørensen, G., Strandfelt, K. N., Andresen, B., Gotfryd, K., Madsen, K. L., Klewe, I. V., Ammendrup-Johnsen, I., Eriksen, J., Newman, A. H., Füchtbauer, E.-M., Gomeza, J., Woldbye, D. P. D., Wörtwein, G. & Gether, U. (2013). A C-terminal PDZ domain-binding sequence is required for striatal distribution of the dopamine transporter. Nature Communications, 4, Article 1580. https://doi.org/10.1038/ncomms2568
Musbat, L., Assis, S., Dilger, J. M., El-Baba, T. J., Fuller, D. R., Knudsen, J. L., Kiefer, H. V., Hirshfeld, A., Friedman, N., Andersen, L. H., Sheves, M., Clemmer, D. E. & Toker, Y. (2018). Action and Ion Mobility Spectroscopy of a Shortened Retinal Derivative. Journal of The American Society for Mass Spectrometry, 29(11), 2152-2159. https://doi.org/10.1007/s13361-018-2033-8
Wyszko, E., Barciszewska, M. Z., Markiewicz, M., Szymanski, M., Markiewicz, W. T., Clark, B. F. C. & Barciszewski, J. (2003). ″Action-at-a distance″ of a new DNA oxidative damage product 6-furfuryl-adenine (kinetin) on template properties of modified DNA. Biochim. Biophys. Acta., 165, 239-245.
Mosses, P. D. (2002). Action Semantics and ASF+SDF: System demonstration. Electronic Notes in Theoretical Computer Science, 65(3).
Kjær, C., Bull, J. N., Carrascosa, E., Nielsen, S. B. & Bieske, E. J. (2021). Action spectroscopy of isomer-selected luciferin anions. European Physical Journal D, 75(3), Article 72. https://doi.org/10.1140/epjd/s10053-021-00076-w
Coughlan, N. J. A., Stockett, M. H., Kjær, C., Ashworth, E. K., Bulman Page, P. C., Meech, S. R., Brøndsted Nielsen, S., Blancafort, L., Hopkins, W. S. & Bull, J. N. (2021). Action spectroscopy of the isolated red Kaede fluorescent protein chromophore. Journal of Chemical Physics, 155(12), Article 124304. https://doi.org/10.1063/5.0063258
Wolfs, J. L., Comfurius, P., Rasmussen, J. T., Keuren, J. F., Lindhout, T., Zwaal, R. F. & Bevers, E. M. (2005). Activated scramblase and inhibited aminophospholipid translocase cause phosphatidylserine exposure in a distinct platelet fraction. Cell. Mol. Life Sci., 62, 1514-1525.
Laliberté, M.-A., Lavoie, S., Hammer, B., Mahieu, G. & McBreen, P. H. (2008). Activation in Prochiral Reaction Assemblies on Pt(111). Journal of the American Chemical Society, (130), 5386-5387.
Coyle, C. M., Puranik, M., Youn, P., Nielsen, S. B., Williams, R. D., Kerby, R. L., Roberts, G. P. & Spiro, T. G. (2003). Activation mechanism of the CO sensor CooA. Journal of Biological Chemistry, 278(37), 35384.
Nagase, H., Suzuki, K., Morodomi, T., Enghild, J. J. & Salvesen, G. (1992). Activation mechanisms of the precursors of matrix metalloproteinases 1, 2 and 3. Matrix (Stuttgart, Germany). Supplement, 1, 237-44.
Nadzieja, M. (2016). Activation of cell divisions in legume nodulation. Aarhus University, Science and Technology.
Vogt, L. M., Talens, S., Kwasniewicz, E., Scavenius, C., Struglics, A., Enghild, J. J., Saxne, T. & Blom, A. M. (2017). Activation of Complement by Pigment Epithelium-Derived Factor in Rheumatoid Arthritis. Journal of Immunology, 199(3), 1113-1121. https://doi.org/10.4049/jimmunol.1700018
Jensen, U. B., Sutherland, D. S. & Ferapontova, E. (2012). Activation of laccase bioelectrocatalysis of O2 reduction to H2O by carbon nanoparticles. Abstract from The 63rd Annual Meeting of the International Society of Electrochemistry, Prague, Czech Republic.
Zhao, Y., Aziz, M., Zangenberg, N. & Larsen, A. N. (2005). Activation volume for phosphorus diffusion in silicon and Si 0.93 Ge0.07. Applied Physics Letters, 86, 141902.
Cai, L., Jørgensen, B. B., Suttle, C. A., He, M., Cragg, B. A., Jiao, N. & Zhang, R. (2019). Active and diverse viruses persist in the deep sub-seafloor sediments over thousands of years. ISME Journal, 13, 1857-1864. https://doi.org/10.1038/s41396-019-0397-9
Damsgaard, C., Lauridsen, H., Harter, T., Kwan, G., Thomsen, J., Funder, A., Supuran, C., Tresguerres, M., Matthews, P. & Brauner, C. (2021). Active Blood Acidification Greatly Enhances Oxygen Supply to the Teleost Retina. FASEB Journal, 35. https://doi.org/10.1096/fasebj.2021.35.S1.01833

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FukshanskyKazarinova, N., Fukshansky, L., Kuhl, M. & Jørgensen, BB. (1996). Theory of equidistant three-dimensional radiance measurements with optical microprobes RID A-1977-2009. Applied Optics, 35(1), 65-73.
Sapart, C. J., Shakhova, N., Semiletov, I., Jansen, J., Szidat, S., Kosmach, D., Dudarev, O., van der Veen, C., Egger, M., Sergienko, V., Salyuk, A., Tumskoy, V., Tison, J. L. & Rockmann, T. (2017). The origin of methane in the East Siberian Arctic Shelf unraveled with triple isotope analysis. Biogeosciences, 14(9), 2283-2292. https://doi.org/10.5194/bg-14-2283-2017
Christiansen, F. B. & Fenchel, T. (1977). Theories of Populations in Biological Communities. Springer. Ecological Studies No. 20
Hoegh-Guldberg, O. (Ed.), Northrop, E. (Ed.), Ashford, O. S., Chopin, T., Cross, J., Quesada, C. M. D., Gaines, S., Geirs, T., Gösling, S., Haugan, P., Hemer, M., Howard, J., Huang, C., Humpe, A., Kitch, G., Koweek, D., Krause-Jensen, D., Lovelock, C. E., Matthews, K. ... Tyedmers, P. (2023). The ocean as a solution to climate change: Updated opportunities for action. World Resources Institute. https://oceanpanel.org/publication/ocean-solutions-to-climate-change
Cazzolla Gatti, R., Reich, P. B., Gamarra, J. G. P., Crowther, T., Hui, C., Morera, A., Bastin, J. F., de-Miguel, S., Nabuurs, G. J., Svenning, J. C., Serra-Diaz, J. M., Merow, C., Enquist, B., Kamenetsky, M., Lee, J., Zhu, J., Fang, J., Jacobs, D. F., Pijanowski, B. ... Decuyper, M. (2022). The number of tree species on Earth. Proceedings of the National Academy of Sciences (PNAS), 119(6), Article e2115329119. https://doi.org/10.1073/pnas.2115329119
Iversen, N. K., Malte, H., Baatrup, E. & Nielsen, T. W. (2012). The normal acid-base status of mice. Respiratory Physiology & Neurobiology, 180, 252-257.
Armelin, V. A., Braga, V. H. D. S., Teixeira, M. T., Guagnoni, I. N., Wang, T. & Florindo, L. H. (2021). The nonpharmacological sequence method provides a reliable evaluation of baroreflex sensitivity in fish. Journal of Experimental Zoology. Part A: Ecological and Integrative Physiology , 335(3), 348-358. https://doi.org/10.1002/jez.2448
Bellvert, A., Adrián-Serrano, S., Macías-Hernández, N., Toft, S., Kaliontzopoulou, A. & Arnedo, M. A. (2023). The Non-Dereliction in Evolution: Trophic Specialisation Drives Convergence in the Radiation of Red Devil Spiders (Araneae: Dysderidae) in the Canary Islands. Systematic Biology, 72(5), 998-1012. https://doi.org/10.1093/sysbio/syad046
Schou, M. F., Loeschcke, V., Bechsgaard, J. S., Schlötterer, C. & Kristensen, T. N. (2016). The Ne to N ratio is dependent on census population size. Poster session presented at SMBE 2016, Australia.
Dewilde, S., Ebner, B., Vinck, E., Gilany, K., Hankeln, T., Burmester, T., Kreiling, J., Reinisch, C., Vanfleteren, J. R., Kiger, L., Marden, M. C., Hundahl, C., Fago, A., Doorslaer, S. V. & Moens, L. (2006). The nerve hemoglobin of the bivalve mollusc Spisula solidissima. Journal of Biological Chemistry, 281(9), 5364-5372.
Sanín, M. J., Kissling, W. D., Bacon, C. D., Borchsenius, F., Galeano, G., Svenning, J.-C., Olivera, J., Ramírez, R., Trénel, P. & Pintaud, J.-C. (2016). The Neogene rise of the tropical Andes facilitated diversification of wax palms (Ceroxylon: Arecaceae) through geographical colonization and climatic niche separation. Botanical Journal of the Linnean Society, 182(2), 303-317. https://doi.org/10.1111/boj.12419
Liu, J., Pellerin, A., Izon, G., Wang, J., Antler, G., Liang, J., Su, P., Jørgensen, B. B. & Ono, S. (2020). The multiple sulphur isotope fingerprint of a sub-seafloor oxidative sulphur cycle driven by iron. Earth and Planetary Science Letters, 536, Article 116165. https://doi.org/10.1016/j.epsl.2020.116165
Feis, M., Thieltges, D. W., Jensen, K. T., Olsen, J. L., de Montaudouin, X., Bazaïri, H., Culloty, S. C. & Luttikhuizen, P. C. (2015). The most vagile host as the main determinant of population connectivity in marine macroparasites. Marine Ecology Progress Series, 520, 85-99. https://doi.org/10.3354/meps11096
Mateo, R. G., Broennimann, O., Normand, S., Petitpierre, B., Araujo, M. B., Svenning, J.-C., Baselga, A., Fernandez-Gonzalez, F., Gomez-Rubio, V., Munoz, J., Suarez, G. M., Luoto, M., Guisan, A. & Vanderpoorten, A. (2016). The mossy north: an inverse latitudinal diversity gradient in European bryophytes. Scientific Reports, 6, Article 25546. https://doi.org/10.1038/srep25546
Churchill, S. P., Sastre de Jesús, I. & Balslev, H. (1992). The mosses of Añangu, Napo Province, Ecuador. Lindbergia, 17(2-3), 50-54.
Olesen, J. M., Bascompte, J., Dupont, Y. & Jordano, P. (2007). The modularity of pollination networks. Proceedings of the National Academy of Sciences (PNAS), 104(50), 19891-19896. https://doi.org/10.1073/pnas.0706375104
Hermannsen, L., Mikkelsen, L., Tougaard, J., Wahlberg, M. & Madsen, P. T. (2016). The missing noise metric: Why noise from small boats is important to quantify. Poster session presented at Effects of Noise on Aquatic Life, Dublin, Ireland.
Stolle, C., Ribas-Ribas, M., Badewien, T. H., Barnes, J., Carpenter, L. J., Chance, R., Damgaard, L. R., Quesada, A. M. D., Engel, A., Frka, S., Galgani, L., Gašparović, B., Gerriets, M., Mustaffa, N. I. H., Herrmann, H., Kallajoki, L., Pereira, R., Radach, F., Revsbech, N. P. ... Wurl, O. (2020). The Milan Campaign: Studying diel light effects on the air–sea interface. Bulletin of the American Meteorological Society, 101(2), E146-E166. https://doi.org/10.1175/BAMS-D-17-0329.1
Stolle, C., Ribas-Ribas, M., Badewien, T. H., Barnes, J., Carpenter, L. J., Chance, R., Damgaard, L. R., Quesada, A. M. D., Engel, A., Frka, S., Galgani, L., Gašparović, B., Gerriets, M., Mustaffa, N. I. H., Herrmann, H., Kallajoki, L., Pereira, R., Radach, F., Revsbech, N. P. ... Wurl, O. (2021). The milan campaign: Studying the sea surface microlayer. Bulletin of the American Meteorological Society, 101(1), 299-304. https://doi.org/10.1175/BAMS-D-17-0329.A
JØRGENSEN, BB. (1995). The Microworld of Marine-Bacteria. Naturwissenschaften, 82(6), 269-278.
Busck, M. M. (2020). The microbiome of social spiders. [PhD thesis, Aarhus University]. Aarhus Universitet.
Hoehler, T. M., Mankel, D. J., Girguis, P. R., McCollom, T. M., Kiang, N. Y. & Jørgensen, B. B. (2023). The metabolic rate of the biosphere and its components. Proceedings of the National Academy of Sciences (PNAS), 120(25), Article e2303764120. https://doi.org/10.1073/pnas.2303764120
Petersen, D. G. (2014). The Metabolic Function of Uncultured Microorganisms Assessed Through Single Cell Genomic Techniques. In T. L. Skovhus, S. M. Caffrey & C. R. J. Hubert (Eds.), Applications of Molecular Microbiological Methods Horizon Scientific Press.
Cedhagen, T., Goldstein, S. T. & Gooday, A. J. (Eds.) (2002). Theme issue: Biology and Biodiversity of Allogromiid Foraminifera. Journal of Foraminiferal Research, 32(4), 331-460.
Wells, R. M. G. & Weber, R. E. (1989). The measurement of oxygen affinity in blood and haemoglobin solutions. In C. R. Bridges & P. J. Butler (Eds.), Techniques in Comparative Respiratory Physiology: An Experimental Approach (pp. 279-303).
Barfod, A. (2007). The meaning of palm flowers. Le Palmier, 34, 4-7.
Merrison, J. P., Field, D., Finster, K., Lomstein, B. A., Nørnberg, P., Ramsing, N. B. & Uggerhøj, E. (2001). The Mars Simulation Laboratory, University of Aarhus. (pp. 371-374).