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Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Daniel, C., Venø, M. T., Ekdahl, Y., Kjems, J. & Öhman, M. (2012). A distant cis acting intronic element induces site-selective RNA editing. Nucleic Acids Research, 40(19), 9876-9886. https://doi.org/10.1093/nar/gks691
Gaulme, P., Rowe, J. F., Bedding, T. R., Benomar, O., Corsaro, E., Davies, G. R., Hale, S. J., Howe, R., Garcia, R. A., Huber, D., Jimenez, A., Mathur, S., Mosser, B., Appourchaux, T., Boumier, P., Jackiewicz, J., Leibacher, J., Schmider, F. .-X., Hammel, H. B. ... Aguirre, V. S. (2016). A DISTANT MIRROR: SOLAR OSCILLATIONS OBSERVED ON NEPTUNE BY THE KEPLER K2 MISSION. The Astrophysical Journal Letters, 833(1), Article 13. https://doi.org/10.3847/2041-8213/833/1/L13
Skyum, S. (1988). A Distributed Election and Spanning Tree Algorithm Based on Depth First Search. Paper presented at Symposium on Mathematics of Computation. ICOMIDC, Ho Chi Minh City, Viet Nam.
Skyum, S. (1987). A Distributed Election and Spanning Tree Algorithm Based on Depth First Search Traversals. Department of Computer Science, Aarhus University. DAIMI PB No. 232
Johansen, K. E., Jørgensen, U. L., Nielsen, S. H., Nielsen, S. E. & Skyum, S. (1988). A distributed spanning tree algorithm. In J. van Leeuwen (Ed.), Distributed Algorithms: 2nd International Workshop Amsterdam, The Netherlands, July 8–10, 1987 Proceedings (pp. 1-12). Springer. https://doi.org/10.1007/BFb0019790
Johansen, K. E., Jørgensen, U. L., Nielsen, S. H., Nielsen, S. E. & Skyum, S. (1987). A Distributed Spanning Tree Algorithm. Department of Computer Science, Aarhus University. DAIMI PB No. 226
Vesterstrøm, J. S. & Riget, J. (2002). A Diversity-Guided Particle Swarm Optimizer - the ARPSO. EVALife Technical Report, (2002-02).
Van Oosterhout, A., Hoggan, E. & Bruns, M. (2022). Adjustable Graphical Notation and Accessible Hardware to Accommodate the Force Feedback Design Process Redesign of Feelix based on Preliminary Evaluations of Design Tools and Methods. In Participative Computing for Sustainable Futures : Adjunct Proceedings of the 12th Nordic Conference on Human-Computer Interaction (NordiCHI’22) Article 52 Association for Computing Machinery. https://doi.org/10.1145/3547522.3547683
Barndorff-Nielsen, O. E. (1994). Adjusted versions of profile likelihood and directed likelihood, and extended likelihood. Journal of the Royal Statistical Society, Series B (Statistical Methodology), 56(1), 125-140.
Madsen, M. D., Madsen, P., Nielsen, B. J., Kristensen, T. N., Jensen, J. & Shirali, M. (2018). Adjusting for Macro-Environmental Sensitivity in Growth rate of Danish Landrace and Duroc Pigs. Abstract from 69th Annual Meeting of the European Federation of Animal Science EAAP 2018, Dubrovnik, Croatia.
He, Y., Zhang, P., Hou, X., Xu, J., Wang, M., Wu, Y., Qu, J. & Dong, MD. (2014). Adjusting the electronic properties of silicon carbide nanoribbons by introducing edge functionalization. R S C Advances, 4(66), 35042-35047. https://doi.org/10.1039/c4ra04351k
Chu, C. T., Oury, T. D., Enghild, J. J. & Pizzo, S. V. (1994). Adjuvant-free in vivo targeting. Antigen delivery by alpha 2-macroglobulin enhances antibody formation. Journal of Immunology, 152(4), 1538-45.
Ortega, A., Geraldi, N. R., Díaz-Rúa, R., Ørberg, S. B., Wesselmann, M., Krause-Jensen, D. & Duarte, C. M. (2020). A DNA Mini-Barcode for Marine Macrophytes. Molecular Ecology Resources, 20(4), 920-935. https://doi.org/10.1111/1755-0998.13164
Löffler, P. M. G., Ries, O., Rabe, A., Okholm, A. H., Thomsen, R. P., Kjems, J. & Vogel, S. (2017). A DNA-programmed liposome fusion cascade. Angewandte Chemie International Edition, 56(43), 13228–13231. https://doi.org/10.1002/anie.201703243
Liu, M., Fu, J., Hejesen, C., Yang, Y., Woodbury, N. W., Gothelf, K., Liu, Y. & Yan, H. (2013). A DNA tweezer-actuated enzyme nanoreactor. Nature Communications, 4, Article 2127. https://doi.org/10.1038/ncomms3127
Schwartzbach, M. I. & Klarlund, N. (1999). A Domain-Specific Language for Regular Sets of Strings and Trees. I E E E Transactions on Software Engineering, (3), 378-386. https://doi.org/10.1109/32.798326
Schwartzbach, M. I. & Klarlund, N. (1997). A Domain-Specific Language for Regular Sets of Strings and Trees. In Proceedings of the Conference on Domain-Specific Languages
Schwartzbach, M. I. & Klarlund, N. (1999). A Domain-Specific Languane for Regular Sets of Strings and Trees. I E E E Transactions on Software Engineering, 25(3), 378-386. https://doi.org/10.1109/32.798326
Nielsen, J. D. & Schwartzbach, M. I. (2007). A Domain-Specific Programming Language for Secure Multiparty Computation. In Preceedings of the 2007 ACM SIGPLAN Workshop on Programming Languages and Analysis for Security (pp. 21-31). Society for Industrial and Applied Mathematics. https://doi.org/10.1145/1255329.1255333
Andersen, S. K., Bhattacharya, P. K., Golovchenko, J., Hertel, N. & Mair, G. (1979). A double-crystal x-ray spectrometer stabilized by a dynamic feedback system. J. Phys. E: Scientific Instruments, 12, 1063-1066.
Arentoft, T., Bouzid, M. Y., Sterken, C., Freyhammer, L. M. & Frandsen, S. (2005). A dozen delta Scuti stars in the open cluster NGC 1817. PASP, 117(832), 601-614.
Byrne, S., Armstead, I., Swain, S. C., Panitz, F., Bendixen, C., Hedegaard, J., Nagy, I., Farrell, J. D., Studer, B., Asp, T. & Cassamo, M. (2014). A Draft Sequence Assembly of the Perennial Ryegrass (Lolium perenne) Genome. In Proceeding of Plant & Animal Genome XXII: The International Conference on the Status of Plant & Animal Genome Research (pp. 161-161).
Joyce, W., Egginton, S., Farrell, A. P. & Axelsson, M. (2019). Adrenergic and adenosinergic regulation of the cardiovascular system in an Antarctic icefish: Insight into central and peripheral determinants of cardiac output. Comparative Biochemistry and Physiology -Part A : Molecular and Integrative Physiology, 230, 28-38. https://doi.org/10.1016/j.cbpa.2018.12.012
Alessandrini, D. & Li, Q. (2017). AdS 3-manifolds and Higgs bundles. Proceedings of the American Mathematical Society, 146(2), 845-860. https://doi.org/10.1090/proc/13586
Marcinkowski, M. D., Adamsen, K. C., Doudin, N., Sharp, M. A., Smith, R. S., Wang, Y., Wendt, S., Lauritsen, J. V., Parkinson, G. S., Kay, B. D. & Dohnálek, Z. (2020). Adsorption and reaction of methanol on Fe3O4(001). Journal of Chemical Physics, 152(6), Article 064703. https://doi.org/10.1063/1.5139418
Britz, D. & Bauer, H. H. (1968). Adsorption and reduction of m-nitrophenol at the dropping mercury electrode. Electrochimica Acta, 13, 347-359.
Henderson, Z., Cole, J., Thomas, A. G., Jones, R. G., Wagstaffe, M., Avila, J., Asensio, M. C., Li, Z. & Syres, K. L. (2025). Adsorption and Thermal Stability of Ionic Liquid Multilayers on ZnO Surfaces. Surfaces, 8(2), Article 29. https://doi.org/10.3390/surfaces8020029
Britz, D., Shallal, A. K. & Bauer, H. H. (1971). Adsorption at electrodes: isotherm parameters for alkyl alcohols in various electrolytes. Collection of Czechoslovak Chemical Communications, 36, 767-780.

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Xiao, X., Jorge, L. R. É., Volf, M., Moos, M., Gélin, U., Finnie, S., Freiberga, I., Jancuchova-Laskova, J., Weiss, M., Novotny, V. & Sam, K. (2024). The effect of drought-induced leaf traits on Ficus leaf palatability is species specific. Ecosphere, 15(5), Article e4831. https://doi.org/10.1002/ecs2.4831
Mathes, G. H., Pimiento, C., Kiessling, W., Svenning, J. C. & Steinbauer, M. J. (2025). The effect of climate legacies on extinction dynamics: A systematic review. Cambridge Prisms: Extinction, 3, Article e6. https://doi.org/10.1017/ext.2025.2
Schlafer, S., K. Johnsen, K., Jørgensen, M.-R., Kjærbølling, I., Schramm, A. & Meyer, R. L. (2023). The effect of an enzyme-containing lozenge on dental biofilm accumulation: A clinical pilot study. Abstract from ORCA: 70th Congress of the European Organization for Caries Research, Egmond aan Zee, Netherlands.
Ozolina, K., Overgaard, J. & Wang, T. (2010). The effect of acclimation on the aerobic scope of Rhinella marina. Poster session presented at Society for Experimental Biology: Annual main meeting, Prag, Czech Republic.
Bataillon, T., Mailund, T., Thorlacius, S., Steingrimsson, E., Rafnar, T., Halldorsson, M., Calian, V. & Schierup, M. H. (2006). The effective size of the Icelandic population and the prospects for LD mapping: inference from unphased microsatellite markers. European Journal of Human Genetics, 14, 1044–1053. https://doi.org/10.1038/sj.ejhg.5201669
Howard, R. J., Giacomelli, M., Lozano-Fernandez, J., Edgecombe, G. D., Fleming, J. F., Kristensen, R. M., Ma, X., Olesen, J., Sørensen, M. V., Thomsen, P. F., Wills, M. A., Donoghue, P. C. J. & Pisani, D. (2022). The Ediacaran origin of Ecdysozoa: integrating fossil and phylogenomic data. Journal of the Geological Society, 179(4), Article jgs2021-107. https://doi.org/10.1144/jgs2021-107
Borgtoft Pedersen, H. & Balslev, H. (1992). The Economic Botany of Ecuadorean palms. In in M. Plotkin & L. Famolare (eds.), Sustainable Harvest and marketing of Rain Forest Products. Island Press, Washington D.C. (pp. 173-191). Island Press, Washington D.C..
Laybourn-Parry, J., Tranter, M. & Hodson, AJ. (2012). The Ecology of Snow and Ice Environments. Oxford University Press.
Somaweera, R., Nifong, J., Rosenblatt, A., Brien, M. L., Combrink, X., Elsey, R. M., Grigg, G., Magnusson, W. E., Mazzotti, F. J., Pearcy, A., Platt, S. G., Shirley, M. H., Tellez, M., van der Ploeg, J., Webb, G., Whitaker, R. & Webber, B. L. (2020). The ecological importance of crocodylians: towards evidence-based justification for their conservation. Biological Reviews, 95(4), 936-959. https://doi.org/10.1111/brv.12594
Jordano, P., Bascompte, J. & Olesen, J. M. (2006). The Ecological Consequences of Complex Topology and Nested Structure in Pollination Webs. In N. M. Waser & J. Ollerton (Eds.), Plant-Pollinator Interactions: From Specialization to Generalization (pp. 173-199). Chicago Univ. Press.
Olesen, J. M. (2006). The ecological consequences of complex topology and nested structure in pollination webs. In N. M. Waser & J. Ollerton (Eds.), Plant-pollinator interactions: From specialization to generalization (pp. 173-199). University of Chicago Press.
Horn, M. A., Schramm, A. & Drake, H. L. (2003). The earthworm gut: An ideal habitat for ingested N2O-producing microorganisms. Applied and Environmental Microbiology, 69(3), 1662-1669. https://doi.org/10.1128/AEM.69.3.1662-1669.2003
Šímová, I., Ordonez, A. & Storch, D. (2023). The dynamics of the diversity–energy relationship during the last 21,000 years. Global Ecology and Biogeography, 32(5), 707-718. https://doi.org/10.1111/geb.13649
Jensen, K. E. (2015). The drivers of plant diversity: a "big data" approach. Aarhus University, Science and Technology.
Funch, P., Cong, N. V., Intanai, I., Bussarawit, S., Nielsen, T., Wang, T., Faurby, S. & Obst, M. (2008).  The diversity of horseshoe crabs - protecting an endangered resource. Poster session presented at International Conference on Marine Organisms and their Biomedical Potentials: Expectations and Realizations, Terengganu, Malaysia.
Brix, H. & Lyngby, J. E. (1982). The distribution of cadmium, copper, lead nd zinc in eelgrass (Zostera marina L.). Science of the Total Environment, 24, 51-63.
Wallace, M. A., Coffman, K. A., Gilbert, C., Ravindran, S., Albery, G. F., Abbott, J., Argyridou, E., Bellosta, P., Betancourt, A. J., Colinet, H., Eric, K., Glaser-Schmitt, A., Grath, S., Jelic, M., Kankare, M., Kozeretska, I., Loeschcke, V., Montchamp-Moreau, C., Ometto, L. ... Obbard, D. J. (2021). The discovery, distribution, and diversity of DNA viruses associated with Drosophila melanogaster in Europe. Virus evolution, 7(1), Article veab031. https://doi.org/10.1093/ve/veab031
Radchuk, V., Laender, F. D., Cabral, J. S., Boulangeat, I., Crawford, M., Bohn, F., Raedt, J. D., Scherer, C., Svenning, J. C., Thonicke, K., Schurr, F. M., Grimm, V. & Kramer-Schadt, S. (2019). The dimensionality of stability depends on disturbance type. Ecology Letters, 22(4), 674-684. https://doi.org/10.1111/ele.13226
JØRGENSEN, BB. & MARAIS, DJD. (1990). The Diffusive Boundary-Layer of Sediments - Oxygen Microgradients Over a Microbial Mat. Limnology and Oceanography, 35(6), 1343-1355.
Lundgren, R. & Olesen, J. M. (2005). The dense and highly connected world of Greenland plants and their pollinators. Arctic, Antarctic, and Alpine Research, 37, 514-520.
Helmstetter, A. J., Cable, S., Rakotonasolo, F., Rabarijaona, R., Rakotoarinivo, M., Eiserhardt, W. L., Baker, W. J. & Papadopulos, A. S. T. (2021). The demographic history of Madagascan micro-endemics: have rare species always been rare? Proceedings of the Royal Society B: Biological Sciences, 288(1959), Article 20210957. https://doi.org/10.1098/rspb.2021.0957
Kopf, A., Camerlenghi, A., Canals, M., Ferdelman, T., Mevel, C., Pälike, H., Roest, W., Ask, M., Jørgensen, B. B., Boetius, A., De Santis, A., Früh-Green, G., Lykousis, V., McKenzie, J., Meinert, J., Parkes, J., Schneider, R. & Weaver, P. (2012). The deep sea and sub-seafloor frontier.
Jørgensen, B. B. & Parkes, R. J. (2011). The deep biosphere - a European challenge. Abstract from EGU General Assembly 2011, Vienna, Austria.
Kvist, L. P. & Barfod, A. S. (1991). The curing rituals of the Cayapa Amerindians of coastal Ecuador, and their exchange of rituals and medicinal plants with other ethnic groups in the region. In M. Rios & H. Borgtoft Pedersen (Eds.), Las Plantas y El Hombre (pp. 149-164). Abya Yala.