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Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Nielsen, J. H., Maurer, J., Holmegaard, L., Krag, S. L., Kalhøj, L., Stapelfeldt, H., Küpper, J., Filsinger, F. & Meijer, G. (2010). Alignment and orientation of quantum-state-selected OCS. Poster session presented at Gordon Research Conference on Multiphoton Processes, Tilton, New Hampshire, United States.
Poulsen, M., Ejdrup, T., Stapelfeldt, H., Hamilton, E. & Seideman, T. (2006). Alignment enhancement by the combination of a short and a long laser pulse. Physical Review A, 73, 033405.
Zhan, Y. Q., Bergenti, I., Hueso, L. E., Dediu, V., de Jong, M. P. & Li, Z. (2007). Alignment of energy levels at the Alq3/La0.7Sr0.3MnO3 interface for organic spintronic devices. Physical Review B, 76, 045406.
Stapelfeldt, H. (2003). Alignment of molecules by strong laser pulses. The European Physical Journal D: Atomic, Molecular, Optical and Plasma Physics, 26, 15-19.
Stapelfeldt, H. (2004). Alignment of Molecules by Strong Laser Pulses. Kemisk Institut, Aarhus Universitet.
Nielsen, J. H., Pentlehner, D. T. V., Mølmer, K., Slenczka, A. & Stapelfeldt, H. (2012). Alignment of molecules in helium droplets. Poster session presented at Gordon Research Conference on Multiphoton Processes, South Hadley, United States.
Amini, K., Boll, R., Lauer, A., Burt, M., Lee, J. W. L., Christensen, L., Brauβe, F., Mullins, T., Savelyev, E., Ablikim, U., Berrah, N., Bomme, C., Düsterer, S., Erk, B., Höppner, H., Johnsson, P., Kierspel, T., Krecinic, F., Küpper, J. ... Rolles, D. (2017). Alignment, orientation, and Coulomb explosion of difluoroiodobenzene studied with the pixel imaging mass spectrometry (PImMS) camera. Journal of Chemical Physics, 147(1), Article 013933. https://doi.org/10.1063/1.4982220
Kim, M. Y., Kim, J., Pfeuffer, K. & Yoon, S. H. (2026). Align-to-Scale: Mode Switching Technique for Unimanual 3D Object Manipulation with Gaze-Hand-Object Alignment in Extended Reality. Proceedings of the ACM on Computer Graphics and Interactive Techniques, 9(2), Article 24. https://doi.org/10.1145/3803538
Wiuf, C., Brameier, M., Hagberg, O. & Stumpf, MPH. (2006). A likelihood approach to analysis of network data. Proceedings of the National Academy of Sciences (PNAS), 103(20), 7566-7570.
von Hegner, I. (2020). A limbus mundi elucidation of habitability: the Goldilocks Edge. International Journal of Astrobiology, 19(4), 320-329. Article 1473550420000075. https://doi.org/10.1017/S1473550420000075
Thomsen, H. D., Holm, A. & Møller, S. P. (2013). A Linear Beam Raster System for the European Spallation Source?. Paper presented at International Particle Accelerator Conference 2013, Shanghai, China.
Bunting, P. C., Atanasov, M., Damgaard-Møller, E., Perfetti, M., Crassee, I., Orlita, M., Overgaard, J., van Slageren, J., Neese, F. & Long, J. R. (2018). A linear cobalt(II) complex with maximal orbital angular momentum from a non-Aufbau ground state. Science, 362(6421), Article aat7319. https://doi.org/10.1126/science.aat7319
Raskin, M. (2017). A linear lower bound for incrementing a space-optimal integer representation in the bit-probe model. In I. Chatzigiannakis, P. Indyk, F. Kuhn & A. Muscholl (Eds.), 44th International Colloquium on Automata, Languages, and Programming, ICALP 2017 (Vol. 80, pp. 88:1--88:12). Article 88 Dagstuhl Publishing. https://doi.org/10.4230/LIPIcs.ICALP.2017.88
Chen, P., Dong, S., Ashall, C., Benetti, S., Bersier, D., Bose, S., Brimacombe, J., Brink, T. G., Buckley, D. A. H., Cappellaro, E., Christie, G. W., Elias-Rosa, N., Filippenko, A. V., Gromadzki, M., Holoien, T. W. S., Hu, S., Kochanek, C. S., Koff, R., Kollmeier, J. A. ... Villanueva, S. (2023). A Linear Relation between the Color Stretch sBV and the Rising Color Slope s0*(B−V) of Type Ia Supernovae. Astrophysical Journal, 946(2), Article 101. https://doi.org/10.3847/1538-4357/acc404
Elkin , M. & Pettie, S. (2015). A linear-size logarithmic stretch path-reporting distance oracle for general graphs. In P. Indyk (Ed.), SODA '15 Proceedings of the Twenty-Sixth Annual ACM-SIAM Symposium on Discrete Algorithms (pp. 805-821 ). Society for Industrial and Applied Mathematics. http://dl.acm.org/citation.cfm?id=2722129.2722184&coll=DL&dl=ACM&CFID=630471957&CFTOKEN=95259129
Brodal, G. S. & Jørgensen, A. G. (2007). A Linear Time Algorithm for the k Maximal Sums Problem. In L. Kucera & A. Kucera (Eds.), Mathematical Foundations of Computer Science 2007: 32nd International Symposium, MFCS 2007 Ceský Krumlov, Czech Republic, August 26-31, 2007 Proceedings (pp. 442-453). Springer. https://doi.org/10.1007/978-3-540-74456-6_40
Gharbi, K., Gautier, A., Danzmann, R. G., Gharbi, S., Sakamoto, T., Høyheim, B., Taggart, J. B., Margaret Cairney, M., Powell, R., Krieg, F., Okamoto, N., Ferguson, M. M., Holm, L.-E. & Guyomard, R. (2006). A Linkage Map for Brown Trout (Salmo trutta): Chromosome Homeologies and Comparative Genome Organization With Other Salmonid Fish. Genetics, 172, 2405-2419.
Weeks, A., Van Eylen, V., Huber, D., Kawata, D., Stokholm, A., Børsen-Koch, V. A., Pinilla, P., Rørsted, J. L., Winther, M. L. & Berger, T. (2025). A link between rocky planet composition and stellar age. Monthly Notices of the Royal Astronomical Society, 539(1), 405-421. https://doi.org/10.1093/mnras/staf474
Caragiannis, I., Micha, E. & Shah, N. (2022). A Little Charity Guarantees Fair Connected Graph Partitioning. Proceedings of the AAAI Conference on Artificial Intelligence, 36(5), 4908-4916. https://doi.org/10.1609/aaai.v36i5.20420
Ibsen, C. J. S. & Birkedal, H. (2011). Alizarin red S modifies apatite nanocrystal size and formation kinetics. In U. Johansson, K. Lilja, A. Nyberg & R. Nyholm (Eds.), MAX-lab Activity Report 2010 (pp. 270-271)
Grinderslev, J., Jepsen, L. H. & Jensen, T. R. (2014). Alkali and alkali earth metal borohydride ammoniates for energy storage. Poster session presented at 43rd Danish Crystallographers Meeting & 6th DanScatt Meeting, Lyngby, Denmark.
Sarusie, R. S., Jepsen, L. H., Sørby, M. H., Cerný, R. & Jensen, T. R. (2014). Alkali earth metal borohydride ammoniates. Poster session presented at EPDIC 14, Aarhus, Denmark.
Sarusie, R. S., Jepsen, L. H. & Jensen, T. R. (2014). Alkali earth metal borohydride ammoniates as future NH3 and/or H2 storage materials. Poster session presented at 43rd Danish Crystallographers Meeting & 6th DanScatt Meeting, Lyngby, Denmark.
Christensen, N. E. (2002). Alkali metals at high pressures. In 'EXCITING' (pp. 245502-1)
Møller, K. T., Ley, M. B., Schouwink, P., Cerny, R. & Jensen, T. R. (2014). Alkali Metal Strontium Borohydrides. Poster session presented at EPDIC 14, Aarhus, Denmark.
Sadikin, Y., Stare, K., Schouwink, P., Brix Ley, M., Jensen, T. R., Meden, A. & Černý, R. (2015). Alkali metal - Yttrium borohydrides: The link between coordination of small and large rare-earth. Journal of Solid State Chemistry, 225, 231-239. https://doi.org/10.1016/j.jssc.2014.12.018
Glombitza, C., Mangelsdorf, K. & Horsfield, B. (2008). Alkaline ester cleavage to examine the feedstock potential of low mature coals for deep microbial populations. Abstract from EGU General Assembly, Vienna, Austria.

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Sørensen, F. & Lund-Hansen, L. C. (1991). Skarven og jordbunden på Vorsø. Naturens Verden, 5, 183-190.
Pedersen, L., Lauridsen, J., Wiberg-Larsen, P., Riis, T., Baattrup-Pedersen, A. & Rasmussen, J. (2019). Sjældne invertebraters habitat præferencer i danske vandløb. Poster session presented at Biodiversitetssymposium 2019, Aarhus, Denmark.
Brucet, S., Arranz, I., Mehner, T., Argillier, C., Beklioglu, M., Benejam, L., Boll, T., Holmgren, K., Lauridsen, T. L., Svenning, J.-C., Winfield, I. J. & Jeppesen, E. (2018). Size diversity and species diversity relationships in fish assemblages of Western Palearctic lakes. Ecography, 41(7), 1064-1076. https://doi.org/10.1111/ecog.03255
Christensen, J. T. (1995). Size dependent resistance to wave action in the intertidal gastropod Littorina littorea (L.). Phuket Marine Biological Center. Special Publications, 15, 155-159.
Brucet, S., Tavsanoglu, U. N., Ozen, A., Levi, E. E., Bezirci, G., Cakiroglu, A. I., Jeppesen, E., Svenning, J.-C., Ersoy, Z. & Beklioglu, M. (2017). Size-based interactions across trophic levels in food webs of shallow Mediterranean lakes. Freshwater Biology Online, 62(11), 1819-1830. https://doi.org/10.1111/fwb.12997
Neuheimer, A. B., Frank, K. T. & Taggart, C. T. (2008). Size-at-age in haddock (Melanogrammus aeglefinus) - application of the growing degree-day (GDD) metric. In Proceedings of the 24th Lowell Wakefield Fisheries Symposium: Resiliency of Gadid Stocks to Fishing and Climate Change Symposium (pp. 111-123)
Braun, S., Morono, Y., Littmann, S. & Lomstein, B. A. (2015). Size and Carbon content of sub-seafloor microbial cells. Poster session presented at American Geophysical Union: Fall Meeting, San Francisco, United States.
Midolo, G., Clark, A. T., Chytrý, M., Essl, F., Dullinger, S., Jandt, U., Bruelheide, H., Dengler, J., Axmanová, I., Aćić, S., Argagnon, O., Biurrun, I., Bonari, G., Chiarucci, A., Ćušterevska, R., De Frenne, P., De Sanctis, M., Divíšek, J., Doležal, J. ... Keil, P. (2026). Sixty years of plant community change in Europe indicate a shift toward nutrient-richer and denser vegetation. Science Advances, 12(15), 1-13. Article eaeb2493. https://doi.org/10.1126/sciadv.aeb2493
Midolo, G., Clark, A. T., Chytrý, M., Essl, F., Dullinger, S., Jandt, U., Bruelheide, H., Argagnon, O., Biurrun, I., Chiarucci, A., Ćušterevska, R., De Frenne, P., De Sanctis, M., Dengler, J., Divíšek, J., Dziuba, T., Ejrnæs, R., Garbolino, E., Illa, E. ... Keil, P. (2025). Six Decades of Losses and Gains in Alpha Diversity of European Plant Communities. Ecology Letters, 28(11), Article e70248. https://doi.org/10.1111/ele.70248
Gittel, A., Barta, J., Kohoutova, I., Schnecker, J., Wild, B., Capek, P., Kaiser, C., Torsvik, V., Richter, A., Schleper, C. & Urich, T. (2014). Site- and horizon-specific patterns of microbial community structure and enzyme activities in permafrost-affected soils of Greenland. Frontiers in Microbiology, 5(October), Article 541. https://doi.org/10.3389/fmicb.2014.00541
Istenic, D. & Arias, C. A. (2023). Sistemas evaporativos con sauces. In Soluciones basadas en la naturaleza para el tratamiento de aguas residuales (pp. 46-49). IWA Publishing.
Balslev, H. & Moraes, M. (1989). Sinopsis de las Palmeras de Bolivia. Aarhus Universitetsforlag.
Stief, P., Kamp, A., Glud, A., Marzocchi, U., Lundgaard, A. S. B., Thamdrup, B. & Glud, R. N. (2015). Sinking diatom aggregates: overlooked anaerobic hotspots in the marine nitrogen cycle. Abstract from ASLO Aquatic Sciences Meeting, Granada, Spain.
Gribsholt, B., Risgaard-Petersen, N., Musat, N., Vagner, T., Adam, B., Kuypers, M. & Jørgensen, B. B. (2010). Single cell ammonium and carbon assimilation in a marine sediment measured by secondary ion mass spectrometry (nanoSIMS). Abstract from 13th International Symposium on Microbial Ecology, Seattle, United States.
Gribsholt, B., Risgaard-Petersen, N., Musat, N., Vagner, T., Adam, B., Kuypers, M. & Jørgensen, B. B. (2011). Single cell ammonium and carbon assimilation in a marine sediment measured by secondary ion mass spectrometry (nanoSIMS). Poster session presented at Dansk Havforskermøde, Fuglsø, Denmark.
Frenck, G., Linden, L., Mikkelsen, T., Brix, H. & Jørgensen, R. B. (2009). Single and interactive effects of elevated temperature (CO2) and (O3) on the population structure of crop plants. Poster session presented at Adaptation Potential in Plants - FEBS Workshop, Wien, Austria.
Simon, M. J., Stafford, K. M., Beedholm, K., Lee, C. M. & Madsen, P. T. (2010). Singing behvaior of fin whales in the Davis Strait with implications for mating, migration and foraging. Acoustical Society of America. Journal, 128(5), 3200-3210.
Ahmerkamp, S., Jalaluddin, F. M., Cui, Y., Brumley, D. R., Pacherres, C. O., Berg, J. S., Stocker, R., Kuypers, M. M. M., Koren, K. & Behrendt, L. (2022). Simultaneous visualization of flow fields and oxygen concentrations to unravel transport and metabolic processes in biological systems. Cell Reports Methods, 2(5), Article 100216. https://doi.org/10.1016/j.crmeth.2022.100216
Merrison, J. P., Finster, K., Gunnlaugsson, H. P., Jensen, A. M., Kinch, K., Lomstein, B. A., Mugford, R. & Nørnberg, P. (2002). Simulation results from the University of Aarhus. Paper presented at Graz, Austria, 16-19 September 2002.
Nørnberg, P., Merrison, J. P., Finster, K., Folkmann, F., Gunnlaugsson, H. P., Hansen, A., Jensen, A. M., Kinch, K., Lomstein, B. A. & Mugford, R. (2002). Simulation of martian surface conditions and dust transport. Paper presented at Graz, Austria, 16-19 September (ESA SP-518,November 2002).