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Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Weber, R. E., Fago, A., Malte, H., Storz, J. & Gorr, T. A. (2012). Allosteric Modulation of Oxygen Affinity in Dwarf Caiman Hemoglobin that Lacks Conventional Proton and Anion Binding Sites. Abstract from XVII International Conference on Oxygen Binding and Sensing Proteins, Parma, Italy.
Fago, A., Hundahl, C., Dewilde, S., Gilany, K., Moens, L. & Weber, R. E. (2004). Allosteric regulation and temperature dependence of oxygen binding in human neuroglobin and cytoglobin. Journal of Biological Chemistry, 279(43), 44417-44426.
Damsgaard, C., Fago, A., Hagner-Holler, S., Malte, H., Burmester, T. & Weber, R. E. (2012). Allosteric regulation of O2 binding in hemocyanin of the millipede, Archispirostreptus gigas, and its molecular underpinnings. Abstract from XVII International Conference on Oxygen Binding and Sensing Proteins, Parma, Italy.
Weber, R. E., Abassi, A., Wells, R. M. G. & Braunitzer, G. (1989). Allosteric transition in hemoglobin (αA2ßI2) from the Rhynchocephalian reptile relict Sphenodon punctatus. Hemoglobin, 13, 625-636.
Dobaczewski, L., Goscinski, K., Bonde Nielsen, K., Nylandsted Larsen, A., Hansen, J. L. & Peaker, A. R. (1999). Alloy Splitting of Gold and Platinum Acceptor Levels in SiGe. Physical Review Letters, 83, 4582.
Kappert, N., Fernández-Mazuecos, M., Otero, A., McGinnie, C., Maurin, O., Forest, F., Baker, W. J., Zuntini, A. R. & Albach, D. C. (2026). All pieces together now? A phylogenomic analysis and tribe-level classification of the heterogeneous family Plantaginaceae. Taxon, 75(4), Article e70230. https://doi.org/10.1002/tax.70230
Kristensen, T. G. & Pedersen, C. S. (2008). All-to-all RF Distance Methods. Poster session presented at Bioinformatics 2008, Warszawa, Poland.
Bandholtz Hansen, S., Sindbæk, S. M., Søvsø, M., Croix, S. & Barfod, G. H. (2022). All under one roof: Chemical and SR Isotope analysis of glass from a viking age pit house at Ribe. In M. Dodt, S. Messal, B. S. Majchczack & A. Kronz (Eds.), Glas als Fernhandelsprodukt im frühen Mittelalter: Köln und der europäische Norden (pp. 103-120). Verlag des Römisch-Germanischen Zentralmuseums. https://doi.org/10.11588/propylaeum.1105
Johannsen, M. & Jørgensen, K. A. (1998). Allylic Amination. Chemical Reviews, 98, 1689.
Thirup, S. & Larsen, N. E. (1990). ALMA, an editor for large sequence alignments. Proteins: Structure, Function, and Bioinformatics, 7(3), 291-5. https://doi.org/10.1002/prot.340070310
Kerekgyarto, A., Jeffcoat, C. R., Lapen, T., Andreasen, R., Righter, M., Ross, D. K. & Simon, J. (2016). Al-Mg Isotope Study of Allende 5241. Abstract from 47th Lunar and Planetary Science Conference, The Woodlands, Texas, United States. http://www.hou.usra.edu/meetings/lpsc2016/pdf/3041.pdf
Mouritsen, K. N. (1990). Almindelig Ryle Calidris alpina. In N. Petri (Ed.), Carlsbergfondet, Frederiksborgmuseet & Ny Carlsbergfondet, Årsskrift 1990 (pp. 92). Projekt EDB I Undervisningen.
Bilo, V., Caragiannis, I., Flammini, M., Igarashi, A., Monaco, G., Peters, D., Vinci, C. & Zwicker, W. (2022). Almost envy-free allocations with connected bundles. Games and Economic Behavior, 131, 197-221. https://doi.org/10.1016/j.geb.2021.11.006
Cohen-Addad, V., Lattanzi, S. & Schwiegelshohn, C. (2025). Almost Optimal PAC Learning for k-Means. In M. Koucky & N. Bansal (Eds.), STOC 2025 - Proceedings of the 57th Annual ACM Symposium on Theory of Computing (pp. 2019-2030). Association for Computing Machinery. https://doi.org/10.1145/3717823.3718180
Asmussen, S. (1977). Almost sure behavior of linear functionals of supercritical branching processes. Transactions of the American Mathematical Society, 231(1), 233-248.
Gregersen, S. O., Aguirre, A., Haselwarter, P. G., Tassarotti, J. & Birkedal, L. (2024). Almost-Sure Termination by Guarded Refinement. Proceedings of the ACM on Programming Languages , 8(ICFP), 203-233. Article 243. https://doi.org/10.1145/3674632
Asmussen, S., Kalashnikov, V., Konstantinides, D., Klüppelberg, C. & Tsitsiashvili, G. (2002). A local limit theorem for random walk maxima with heavy tails. Statist. Probab. Lett., 56(2), 399-404.
Timany, A., Krebbers, R., Dreyer, D. & Birkedal, L. (2024). A Logical Approach to Type Soundness. Journal of the ACM, 71(6), Article 40. https://doi.org/10.1145/3676954
Simmons , R. J. & Zerny, I. (2013). A logical correspondence between natural semantics and abstract machines. In R. Peña & T. Schrijvers (Eds.), Proceedings of the 15th Symposium on Principles and Practice of Declarative Programming, PPDP '13 (pp. 109-119 ). Association for Computing Machinery. https://doi.org/10.1145/2505879.2505899
Timany, A., Stefanesco, L., Krogh-Jespersen, M. & Birkedal, L. (2018). A Logical Relation for Monadic Encapsulation of State: Proving contextual equivalences in the presence of runST. In Proceedings of the ACM on Programming Languages (Vol. 2, pp. 64:00-64:28). Association for Computing Machinery. https://doi.org/10.1145/3158152
Baddeley, A., Coeurjolly, J.-F., Rubak, E. & Waagepetersen, R. (2013). A logistic regression estimating function for spatial Gibbs point processes. Centre for Stochastic Geometry and advanced Bioimaging, Aarhus University. CSGB Research Reports No. 02 http://math.au.dk/publs?publid=973
Mørkbak, A. L., Ramlau-Hansen, C. H., Møller, U. K., Henriksen, T. B., Møller, J. & Nexø, E. (2006). A longitudinal study of serum cobalamins and its binding proteins in lactating women. European Journal of Clinical Nutrition, 61(2), 184-9. https://doi.org/10.1038/sj.ejcn.1602502
Pastorello, A., Reguitti, A., Tartaglia, L., Valerin, G., Cai, Y. Z., Charalampopoulos, P., De Luise, F., Dong, Y., Elias-Rosa, N., Farah, J., Farina, A., Fiscale, S., Fraser, M., Galbany, L., Gomez, S., González-Bañuelos, M., Hiramatsu, D., Howell, D. A., Kangas, T. ... Wainscoat, R. J. (2025). A long-lasting eruption heralds SN 2023ldh, a clone of SN 2009ip. Astronomy and Astrophysics, 701, Article A32. https://doi.org/10.1051/0004-6361/202554858
Sandquist, E. L., Mathieu, R. D., Brogaard, K., Meibom, S., Geller, A. M., Orosz, J. A., Milliman, K. E., Jeffries, M. W. . J., Brewer, L. N., Platais, I., Grundahl, F., Bruntt, H., Frandsen, S. & Stello, D. (2012). A Long-Period Totally Eclipsing Binary Star at the Turnoff of the Open Cluster NGC 6819 Discovered with Kepler. ArXiv. http://adsabs.harvard.edu/abs/2012arXiv1211.2527S
Kossak-Glowczewski, J., Froitzheim, N., Nagel, T., Pleuger, J., Keppler, R., Leiss, B. & Régent, V. (2017). Along-strike shear-sense reversal in the Vals-Scaradra Shear Zone at the front of the Adula Nappe (Central Alps, Switzerland). Swiss Journal of Geosciences, 110(2), 677–697. https://doi.org/10.1007/s00015-017-0270-7
Barzgar, S., Yan, Y., Tarik, M., Skibsted, J., Ludwig, C. & Lothenbach, B. (2022). A long-term study on structural changes in calcium aluminate silicate hydrates. Materials and Structures/Materiaux et Constructions, 55(10), Article 243. https://doi.org/10.1617/s11527-022-02080-x
Bertram, H. C., Meyer, R. L. & Andersen, H. J. (2009). A look at NMR relaxometry applications in meat science – recent advances in coupling nmr realxometry with spectroscopic, thermodynamic, microscopic and sensory measurements. In M. Guojonsdottir, P. S. Belton & G. A. Webb (Eds.), Magnetic resonance in food science: Challenges in a changing world (pp. 241-250). Royal Society of Chemistry.
Serrano, L. M., Gandolfi, D., Mustill, A. J., Barragán, O., Korth, J., Dai, F., Redfield, S., Fridlund, M., Lam, K. W. F., Díaz, M. R., Grziwa, S., Collins, K. A., Livingston, J. H., Cochran, W. D., Hellier, C., Bellomo, S. E., Trifonov, T., Rodler, F., Alarcon, J. ... Ziegler, C. (2022). A low-eccentricity migration pathway for a 13-h-period Earth analogue in a four-planet system. Nature Astronomy, 6(6), 736-750. https://doi.org/10.1038/s41550-022-01641-y
Afshani, P. (2021). A Lower Bound for Dynamic Fractional Cascading. In ACM-SIAM Symposium on Discrete Algorithms, SODA 2021 (pp. 2229-2248). Association for Computing Machinery. https://doi.org/10.5555/3458064.3458197
Afshani, P., van Duijn, I., Killmann, R. & Nielsen, J. S. (2020). A lower bound for jumbled indexing. In S. Chawla (Ed.), Proceedings of the 2020 ACM-SIAM Symposium on Discrete Algorithms (pp. 592-606). Association for Computing Machinery. https://doi.org/10.1137/1.9781611975994.36
Bley, G. A. (2018). A lower bound on the renormalized Nelson model. Journal of Mathematical Physics, 59(6), Article 061901. https://doi.org/10.1063/1.5008831
Andreotti, B., Claudin, P., Iversen, J. J., Merrison, J. P. & Rasmussen, K. R. (2021). A lower-than-expected saltation threshold at Martian pressure and below. Proceedings of the National Academy of Sciences (PNAS), 118(5), Article e2012386118. https://doi.org/10.1073/pnas.2012386118

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Monsarrat, S., Novellie, P., Rushworth, I. & Kerley, G. (2019). Shifted distribution baselines: neglecting long-term biodiversity records risks overlooking potentially suitable habitat for conservation management. Philosophical Transactions of the Royal Society B: Biological Sciences, 374(1788), Article 20190215. https://doi.org/10.1098/rstb.2019.0215
Aungtonya, C. & Kristensen, J. H. (1992). Shell trade survey on Phuket Island. Phuket Marine Biological Center. Special Publications, 11, 37-41.
Cedhagen, T. (1999). Shell Colour Polymorphism in Bulla ampulla. Phuket Marine Biological Center. Special Publications, (1), 244.
Hylleberg, J. & Tantichodok, P. (1992). Shell capacity as a function of spine length. Phenotypic variation in Chicoreus ramosus. Phuket Marine Biological Center. Special Publications, 10, 135-139.
Marden, E., Abbott, R. J., Austerlitz, F., Ortiz-Barrientos, D., Baucom, R. S., Bongaerts, P., Bonin, A., Bonneaud, C., Browne, L., Alex Buerkle, C., Caicedo, A. L., Coltman, D. W., Cruzan, M. B., Davison, A., DeWoody, J. A., Dumbrell, A. J., Emerson, B. C., Fountain-Jones, N. M., Gillespie, R. ... Rieseberg, L. H. (2021). Sharing and reporting benefits from biodiversity research. Molecular Ecology, 30(5), 1103-1107. https://doi.org/10.1111/mec.15702
Okamura, B., Ayres, K., Salgado, J., Davidson, T. A., Shaw, R., Stephens, T. & Hoare, D. (2013). Shallow lake sediments provide evidence for metapopulation dynamics: a pilot study. Aquatic Ecology, 47(2), 163-176. https://doi.org/10.1007/s10452-013-9432-5
Rehder, G., Lapham, L., Fossing, H., Gülzow, W., Deimling, J. S. V., Endler, R., Spiess, V., Jensen, J. B., Bruechert, V., Ferdelman, T., Schmale, O., Virtasalo, J., Conley, D., Neumann, T., Leipe, T., Flury, S., Toth, Z. & Jørgensen, B. B. (2011). Shallow gas occurrences, methane fluxes and their controlling processes in the Baltic. Abstract from 8th Baltic Sea Science Congress, Skt. Petersborg, Russian Federation. http://www.bssc2011.org/program/bssc2011_abstracts.pdf
Zwerschke, N., Cobain, M. R. D., Morley, S. A., Peck, L. A., Newton, J., Barnes, D. K. A. & Hill, S. L. (2026). Shallow benthic Antarctic food webs recover complexity after disturbance. Marine Environmental Research, 220, Article 108207. https://doi.org/10.1016/j.marenvres.2026.108207
Ellawala Kankanamge, C., Matheson, F. E. & Riis, T. (2019). Shading constrains the growth of invasive submerged macrophytes in streams. Aquatic Botany, 158, Article 103125. https://doi.org/10.1016/j.aquabot.2019.06.004
Maklakov, A. A., Bilde, T. & Lubin, Y. (2004). Sexual selection for increased male body size and protandry in a spider. Animal Behaviour, 68, 1041-1048.
Albo, M. J., Toft, S. & Bilde, T. (2013). Sexual selection, ecology, and evolution of nuptial gifts in spiders. In R. H. Macedo & G. Machado (Eds.), Sexual Selection: Perspectives and Models from the Neotropics (pp. 183-196). Academic Press.
Laidre, K. L., Heagerty, P. J., Heide-Jørgensen, M. P., Witting, L. & Simon, M. J. (2009). Sexual segregation of common minke whales (Balaenoptera acutorostrata) in Greenland, and the influence of sea temperatureon the sex ratio of catches. I C E S Journal of Marine Science, (66), 1-14.
Barfod, A. S. (2012). Sexual expression in palms. Abstract from Nordic Meeting of Tropical Botany, Göteborg, Sweden.
Maklakov, A. A., Bilde, T. & Lubin, Y. (2005). Sexual Conflict in the  Wild: Elevated Mating Rate Reduces Female Lifetime Reproductive Success. The American Naturalist, 165 suppl., S38-S45.
Photopoulou, T., Heerah, K., Pohle, J. & Boehme, L. (2020). Sex-specific variation in the use of vertical habitat by a resident Antarctic top predator. Proceedings of the Royal Society B: Biological Sciences, 287(1937), Article 20201447. https://doi.org/10.1098/rspb.2020.1447
Sprogis, K. R., Christiansen, F., Raudino, H. C., Kobryn, H. T., Wells, R. S. & Bejder, L. (2018). Sex-specific differences in the seasonal habitat use of a coastal dolphin population. Biodiversity and Conservation, 27(14), 3637-3656. https://doi.org/10.1007/s10531-018-1618-7
Ehlers, B., Maurice, S. & Bataillon, T. (2005). Sex inheritance in gynodioecious species: a polygenic view. Proceedings of the Royal Society B: Biological Sciences, 272, 1795 - 1802.
Olesen, J. M. (1990). Sex hos planter. Illustreret Videnskab, (6), 40-46, 80.
Bundgaard, J. (2016). Sex - en evolutionær gåde. In K. Finster, T. Wang, F. Borchsenius & F. B. Christiansen (Eds.), Evolutionsbiologiske milepæle (1 ed., pp. 179-197). Aarhus Universitetsforlag.
Christiansen, F. & Feldman, M. W. (1995). Sex determination in a symmetric autosomal multi-locus model. Theoretical Population Biology, 47, 107-127.
Brix, H. & Schierup, H.-H. (1989). Sewage treatment in constructed reed beds - Danish experiences. Water Science and Technology, 21(12), 1665-1668.
Li, S. (2012). Several genome-wide research topics based on the new high-throughput sequencing technology. Aarhus University, Faculty of Science and Technology.
Abildgaard, L., Engberg, R., Pedersen, K., Schramm, A. & Højberg, O. (2006). Sequence variation among Alpha-toxin of Clostridium perfringens strains isolated from diseased and healthy chickens. In RRI-INRA Gut Microbiology 2006: Proceedings of the 5th Biennial Meeting Research to Improve Health, Immune Response and Nutrition
Van Bodegom, P. M., Sorrell, B. K., Oosthoek, A., Bakker, C. & Aerts, R. (2008). Separating the effects of partial submergence and soil oxygen demand on plant physiology. Ecology, 89(1), 193-204. https://doi.org/10.1890/07-0390.1
Baatrup, E. (1985). Sensory terminal buds of larval and adult lampreys. In Functional Morphology in Vertebrates. Proceedings of the 1st International Symposium on Vertebrate Morphol-ogy (pp. 723-725). Gustav Fischer Verlag.
More, H. L., O´Connor, S. M., Brøndum, E. T., Wang, T., Bertelsen, M. F., Grøndahl, C., Petersen, K. K., Hørlyck, A., Funder, J. A. & Donelan, M. (2013). Sensorimotor responsiveness and resolution in the giraffe. Journal of Experimental Biology, 216, 1003-1011. https://doi.org/10.1242/jeb.067231
Gkikopoulou, K. C., Gillespie, D. M., Johnson, M., Aguilar de Soto, N., Tyack, P. L. & Marques, T. A. (2025). Sensitivity of density estimates to off-axis beam pattern assumptions in deep-diving odontocetes. Journal of the Acoustical Society of America, 157(6), 4002-4016. https://doi.org/10.1121/10.0036810