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Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Schneider, B. I. & Nygaard, N. (2002). Orthogonal functions, discrete variable representation, and generalized gauss quadratures. Journal of Physical Chemistry Part A: Molecules, Spectroscopy, Kinetics, Environment and General Theory, 106, 10773.
Nygaard, N., Bruun, G. M., Schneider, B. I., Clark, C. W. & Feder, D. L. (2004). Vortex line in a neutral finite-temperature superfluid Fermi gas. Physical Review A, 69, 053622.
Williams, J. E., Nygaard, N. & Clark, C. W. (2004). Phase diagrams for an ideal gas mixture of fermionic atoms and bosonic molecules. New J. Phys., 6, 123.
Williams, J. E., Nikuni, T., Nygaard, N. & Clark, C. W. (2004). Atom-molecule equilibration in a degenerate Fermi gas with resonant interactions. Journal of Physics B: Atomic, Molecular and Optical Physics, L351.
Schneider, B. I. & Nygaard, N. (2004). Discrete variable representation for singular Hamiltonians. Physical Review E, 70, 056706.
Morales, M. A., Nygaard, N., Williams, J. E. & Clark, C. W. (2005). Ultracold fermion cooling cycle using heteronuclear Feshbach resonances. New J. Phys., 7, 87.
Kistner, C., Winzer, T., Pizschke, A., Mulder, L., Sati, S., Kaneko, T., Tabata, S., Sandal, N. N., Stougaard, J., Webb, K. J., Szczyglowski, K. & Parniske, M. (2005). Seven Lotus japonicus genes required for transcriptional reprogramming of the root during fungal and bacterial symbiosis. Plant Cell, 17, 1-13.
Oblak, D., Petrov, P. G., Garrido Alzar, C. L., Tittel, W., Vershovski, A. K., Mikkelsen, J. K., Sørensen, J. L. & Polzik, E. S. (2005). Quantum-noise-limited interferometric measurement of atomic noise: Towards spin squeezing on the Cs clock transition. Physical Review A, 71, 043807.
Williams, J. E., Nygaard, N. & Clark, C. W. (2006). Theory of Feshbach molecule formation in a dilute gas during a magnetic field ramp. New Journal of Physics, 8(150).
Nygaard, N., Schneider, B. I. & Julienne, P. S. (2006). A two-channel R-matrix analysis of magnetic field induced Feshbach resonances. Physical Review A, 74, 042705.
Nygaard, N. (2005). Bose-Einstein Kondensation: Når atomer synger i kor. Kvant: Tidsskrift for Fysik og Astronomi, 1, 29.
Nygaard, N. (1999). Fysikkens varme emne. Berlingske Tidende.
Nygaard, N. (2001). Verdens mindste ekplosion. Berlingske Tidende.
Nygaard, N. (2001). Smukt eksperiment – Nobelpris. Berlingske Tidende.
Bødker, S. & Andersen, P. B. (2005). Complex Mediation. Journal of Human Computer Interaction, 20(4), 353-402.
Bødker, S. & Christiansen, E. (2006). Computer support for social awareness in flexible work. Computer Supported Cooperative Work, 15(1), 1-28.
Bødker, S. & Petersen, A. B. (2005). Mediating the co-production of complex media products. Poster session presented at International ACM SIGGROUP Conference on Supporting Group Work, Sanibel Island, United States.
Biernacka, M., Danvy, O. & Sørensen, K. S. (2005). Extracting Evaluators from Proofs of Weak Head Normalization. In Electronic Notes in Theoretical Computer Science Elsevier Science Publishers.
Brodal, G. S., Demaine, E. D. & Munro, J. I. (2005). Fast Allocation and Deallocation with an Improved Buddy System. Acta Informatica, 41(4-5), 273-291. https://doi.org/10.1007/s00236-004-0159-6
Brodal, G. S., Fagerberg, R. & Moruz, G. (2005). On the Adaptiveness of Quicksort. In ALENEX05 (pp. 130-140). Society for Industrial and Applied Mathematics.
Arge, L., Brodal, G. S., Fagerberg, R. & Laustsen, M. (2005). Cache-Oblivious Planar Orthogonal Range Searching and Counting. In Proceedings of the twenty-first annual symposium on Computational geometry (pp. 160-169). Association for Computing Machinery. https://doi.org/10.1145/1064092.1064119
Brodal, G. S., Fagerberg, R. & Moruz, G. (2005). Cache-Aware and Cache-Oblivious Adaptive Sorting. In L. Caires, G. F. Italiano, L. Monteiro, C. Palamidessi & M. Yung (Eds.), Automata, Languages and Programming: 32nd International Colloquium, ICALP 2005, Lisbon, Portugal, July 11-15, 2005. Proceedings (pp. 576-588). Springer. https://doi.org/10.1007/11523468_47
Brodal, G. S. & Moruz, G. (2005). Tradeoffs Between Branch Mispredictions and Comparisons for Sorting Algorithms. In F. Dehne, A. Lopez-Ortiz & J.-R. Sack (Eds.), Algorithms and Data Structures: 9th International Workshop, WADS 2005, Waterloo, Canada, August 15-17, 2005. Proceedings (pp. 385-395). Springer. https://doi.org/10.1007/11534273_34
Brodal, G. S. & Fagerberg, R. (2006). Cache-oblivious String Dictionaries. In SODA '06 Proceedings of the seventeenth annual ACM-SIAM symposium on Discrete algorithm (pp. 581-590). Association for Computing Machinery. https://doi.org/10.1145/1109557.1109621
Brodal, G. S. (2005). Finger Search Trees. In D. Mehta & S. Sahni (Eds.), Handbook of Data Structures and Applications CRC Press.
Arge, L., Brodal, G. S. & Fagerberg, R. (2005). Cache-Oblivious Data Structures. In D. Mehta & S. Sahni (Eds.), Handbook of Data Structures and Applications CRC Press.
Brodal, G. S. & Leonardi, S. (Eds.) (2005). ESA 2005: 13th Annual European Symposium: Springer LNCS.
Møller, A. & Schwartzbach, M. I. (2005). The Design Space of Type Checkers for XML Transformation Languages. In Database Theory - ICDT 2005: 10th International Conference, Edinburgh, UK, January 5-7, 2005. Proceedings (pp. 17-36). Springer. https://doi.org/10.1007/978-3-540-30570-5_2
Kristoffersen, T. K. (2006). Deviation measure in two-stage stochastic linear programming. Mathematical Methods of Operations Research, 62(2), 255-274.
Svenning, J.-C., Sanjines A., A., Normand, S., Vormisto, J. & Balslev, H. (2005). Environmental and spatial controls of palm (Arecaceae) species distributions at local to regional scales in neotropical forests. Poster session presented at The Palms - An International Symposium on the Biology of the Palm Family, The Linnean Society and The Royal Botanic Gardens, London and Kew, United Kingdom.
Bjorholm, S. W., Svenning, J.-C., Skov, F. & Balslev, H. (2006). Which factors control the distribution of palms in the Americas?. Poster session presented at ISOBIS Annual Meeting, 2006, Copenhagen, Denmark.
Knudsen, H. (2003). Til Nationens Dygtiggørelse: - den tekniske forskning mellem stat, industri og privat filantropi 1916-1937. Erhvervshistorisk årbog: meddelelser fra Erhvervsarkivet, 52, 48-97.
Knudsen, H. (2006). Politik, penge og forskningsvilkår. In Videnskab uden grænser: Dansk Naturvidenskabs Historie, Bind 4 (Vol. 4, pp. 262-279). Aarhus Universitetsforlag.
Knudsen, H. & Nielsen, K. H. (2006). Forskning uden for universiteterne. In H. Nielsen & K. Hvidtfelt Nielsen (Eds.), Viden uden grænser 1920-1970: Dansk Naturvidenskabs Historie, Bind 4 (Vol. 4, pp. 259-79). Aarhus Universitetsforlag.
Knudsen, H. (1999). Pandoras Æske: Anmeldelse af "Verden om tænkningen", Philosophia årg. 25, 3-4. Slagmark: tidsskrift for idéhistorie , (28-29), 191-194.
Bardram, J. E., Kjær, R. E. & Pedersen, M. Ø. (2003). Context-Aware User Authentication - Supporting Proximity-Based Login in Pervasive Computing. In Proceedings of Ubicomp 2003: Ubiquitous Computing (2864 ed., pp. 107-123). Springer.
Bahner, K. (2005). Design of a High Precision Control System. In Design of a High Precision Control System McMaster University.
Bahner, K. (2005). Report to SNEAP 2004. In Report to SNEAP 2004 McMaster Univeristy.
Bødker, S. & Nielsen, M. M. (2004). Desktop Computing. Australian Journal of Information Systems, 88-101.

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Fonseca Poza, A. A. (2023). Community and control of filamentous sulfur bacteria. [PhD thesis, Aarhus University]. Aarhus Universitet.
Volf, M., Leong, J. V., de Lima Ferreira, P., Volfová, T., Kozel, P., Matos-Maraví, P., Hörandl, E., Wagner, N. D., Luntamo, N., Salminen, J. P., Segar, S. T. & Sedio, B. E. (2023). Contrasting levels of β-diversity and underlying phylogenetic trends indicate different paths to chemical diversity in highland and lowland willow species. Ecology Letters, 26(9), 1559-1571. https://doi.org/10.1111/ele.14273
Tang, C.-C., Zhang, M., Wang, B., Zou, Z.-S., Yao, X.-Y., Zhou, A.-J., Liu, W., Ren, Y.-X., Li, Z.-H., Wang, A. & He, Z.-W. (2023). Contribution identification of hydrolyzed products of potassium ferrate on promoting short-chain fatty acids production from waste activated sludge. Journal of Environmental Management, 345, Article 118886. https://doi.org/10.1016/j.jenvman.2023.118886
Archer, S. D. J., Lee, K. C., Caruso, T., Alcami, A., Araya, J. G., Cary, S. C., Cowan, D. A., Etchebehere, C., Gantsetseg, B., Gomez-Silva, B., Hartery, S., Hogg, I. D., Kansour, M. K., Lawrence, T., Lee, C. K., Lee, P. K. H., Leopold, M., Leung, M. H. Y., Maki, T. ... Pointing, S. B. (2023). Contribution of soil bacteria to the atmosphere across biomes. Science of the Total Environment, 871, Article 162137. https://doi.org/10.1016/j.scitotenv.2023.162137
Kissling, W. D., Shi, Y., Koma, Z., Meijer, C., Ku, O., Nattino, F., Seijmonsbergen, A. C. & Grootes, M. W. (2023). Country-wide data of ecosystem structure from the third Dutch airborne laser scanning survey. Data in Brief, 46, Article 108798. https://doi.org/10.1016/j.dib.2022.108798
Knudsen, S. W., Hesselsøe, M., Rytter, M., Lillemark, M. R., Tøttrup, A. P., Rahbek, C., Sheard, J. K., Thomsen, P. F., Agersnap, S., Mortensen, P. B. & Møller, P. R. (2023). Detection of environmental DNA from amphibians in Northern Europe applied in citizen science. Environmental DNA, 5(6), 1429-1448. https://doi.org/10.1002/edn3.462
Quibod, N. R. M., Gelin, U., van Langevelde, F. & Tomlinson, K. W. (2023). Diet-specific responses of skull traits to aridity gradients in bovids and cervids. Zoological Journal of the Linnean Society , 199(4), 861-870. https://doi.org/10.1093/zoolinnean/zlad068
Bornø, M. L., Zervas, A., Bak, F., Merl, T., Koren, K., Nicolaisen, M. H., Jensen, L. S. & Müller-Stöver, D. S. (2023). Differential impacts of sewage sludge and biochar on phosphorus-related processes: An imaging study of the rhizosphere. Science of the Total Environment, 905, Article 166888. https://doi.org/10.1016/j.scitotenv.2023.166888
Politi, T., Zilius, M., Bartoli, M., Cardini, U., Marzocchi, U. & Bonaglia, S. (2023). Direct contribution of invertebrate holobionts to methane release from coastal sediments. Limnology and Oceanography Letters, 8(6), 876-884. https://doi.org/10.1002/lol2.10361
Burgers, T. M., Miller, L. A., Rysgaard, S., Mortensen, J., Else, B., Tremblay, J. & Papakyriakou, T. (2023). Distinguishing Physical and Biological Controls on the Carbon Dynamics in a High-Arctic Outlet Strait. Journal of Geophysical Research: Oceans, 128(3), Article e2022JC019393. https://doi.org/10.1029/2022JC019393
Shameer, T. T., Mungi, N. A., Backer, S. J., Raman, S., Reddy, S. R., Easa, P. S. & Sanil, R. (2023). Distribution and conservation status of the endemic Nilgiri marten (Martes gwatkinsii). Mammalia, 87(4), 360-366. https://doi.org/10.1515/mammalia-2021-0113
Mungi, N. A., Qureshi, Q. & Jhala, Y. V. (2023). Distribution, drivers and restoration priorities of plant invasions in India. Journal of Applied Ecology, 60(11), 2400-2412. https://doi.org/10.1111/1365-2664.14506
Aaskov, M. L., Nelson, D., Lauridsen, H., Huong, D. T. T., Ishimatsu, A., Crossley, II, D. A., Malte, H. & Bayley, M. (2023). Do air-breathing fish suffer branchial oxygen loss in hypoxic water? Proceedings of the Royal Society B: Biological Sciences, 290(2006), Article 20231353. https://doi.org/10.1098/rspb.2023.1353
Chen, X., Jähnig, S. C., Jeschke, J. M., Evans, T. G. & He, F. (2023). Do alien species affect native freshwater megafauna? Freshwater Biology, 68(6), 903-914. https://doi.org/10.1111/fwb.14073
Rojano Doñate, L., Lamoni, L., Tougaard, J. & Findlay, C. R. (2023). Effect of Vessel Noise on Marine Mammals and Measures to Reduce Impact. In A. N. Popper, J. A. Sisneros, A. Hawkins & F. Thomsen (Eds.), The Effects of Noise on Aquatic Life: Principles and Practical Considerations Springer. https://doi.org/10.1007/978-3-031-10417-6_138-1
Janyasupab, P., Brix, H. & Jampeetong, A. (2023). Effects of Longan Biochar as Filter Materials on Plant Responses and Wastewater Treatment by Typha angustifolia L. Natural and Life Sciences Communications, 22(3), Article e2023035. https://doi.org/10.12982/NLSC.2023.035
Tougaard, J., Griffiths, E. T., Ladegaard, M., Findlay, C. R., Cosentino, M., Sveegaard, S., Kyhn, L. A., Carlström, J., Owen, K. & Eriksson, P. (2023). Effects of rerouting shipping lanes in Kattegat on the underwater soundscape: Report to the Danish Environmental Protection Agency on EMFF project TANGO. Aarhus University, DCE - Danish Centre for Environment and Energy. Scientific Report from DCE - Danish Centre for Environment and Energy No. 535 http://dce2.au.dk/pub/SR535.pdf
Zhou, Y., Zhan, X., Jin, J., Zhou, L., Bergman, J., Li, X., Rousselle, M. M. C., Belles, M. R., Zhao, L., Fang, M., Chen, J., Fang, Q., Kuderna, L., Marques-Bonet, T., Kitayama, H., Hayakawa, T., Yao, Y. G., Yang, H., Cooper, D. N. ... Zhang, G. (2023). Eighty million years of rapid evolution of the primate Y chromosome. Nature Ecology & Evolution, 7(7), 1114-1130. https://doi.org/10.1038/s41559-022-01974-x
Lustermans, J. (2023). Electric interactions with cable bacteria: Community studies of flocking bactera. [PhD thesis, Aarhus University]. Aarhus Universitet.
Gordon, C. E., Greve, M., Henley, M., Bedetti, A., Allin, P. & Svenning, J. C. (2023). Elephant rewilding affects landscape openness and fauna habitat across a 92-year period. Ecological Applications, 33(3), Article e2810. https://doi.org/10.1002/eap.2810
Glarou, M., Gero, S., Frantzis, A., Brotons, J. M., Vivier, F., Alexiadou, P., Cerdà, M., Pirotta, E. & Christiansen, F. (2023). Estimating body mass of sperm whales from aerial photographs. Marine Mammal Science, 39(1), 251-273. https://doi.org/10.1111/mms.12982
Charlton, C., Christiansen, F., Ward, R., Mackay, A. I., Andrews-Goff, V., Zerbini, A. N., Childerhouse, S., Guggenheimer, S., O'Shannessy, B. & Brownell, R. L. (2023). Evaluating short- to medium-term effects of implantable satellite tags on southern right whales Eubalaena australis. Diseases of Aquatic Organisms, 155, 125-140. https://doi.org/10.3354/dao03730
Hordijk, I., Maynard, D. S., Hart, S. P., Lidong, M., ter Steege, H., Liang, J., de-Miguel, S., Nabuurs, G. J., Reich, P. B., Abegg, M., Adou Yao, C. Y., Alberti, G., Almeyda Zambrano, A. M., Alvarado, B. V., Esteban, A. D., Alvarez-Loayza, P., Alves, L. F., Ammer, C., Antón-Fernández, C. ... Evenness mediates the global relationship between forest productivity and richness (2023). Evenness mediates the global relationship between forest productivity and richness. Journal of Ecology, 111(6), 1308-1326. https://doi.org/10.1111/1365-2745.14098
Joyce, W., Warwicker, J., Shiels, H. A. & Perry, S. F. (2023). Evolution and divergence of teleost adrenergic receptors: why sometimes 'the drugs don't work' in fish. Journal of Experimental Biology, 226(19), Article jeb245859. https://doi.org/10.1242/jeb.245859
Natarajan, C., Signore, A. V., M. Bautista, N., Hoffmann, F. G., Tame, J. R. H., Fago, A. & Storz, J. F. (2023). Evolution and molecular basis of a novel allosteric property of crocodilian hemoglobin. Current Biology, 33(1), 98-108.e4. https://doi.org/10.1016/j.cub.2022.11.049
Rose, C. (2023). Evolutionary ecology of intra- and inter-specific interactions in spiders. [PhD thesis, Aarhus University]. Aarhus Universitet.