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Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Plessis, A. D. & Vosegaard, H. (2001). Characterisation of strong smooth stability. Mathematica Scandinavica, 88(2), 193-228. http://www.mscand.dk/article.php?id=42
Ørsted, B. & Vargas, J. (2004). Restriction of square-integrable representations: discrete spectrum. Duke Mathematical Journal, 123(3), 609-633.
Agarwal, P., Arge, L., Erickson, J., Yu, H., Albers, S. (Ed.) & Radzik, T. (Ed.) (2004). Efficient Tradeoff Schemes in Data Structures for Querying Moving Objects. In Ikke angivet (3221 i Lecture Notes in Computer Science ed., pp. 4-15). Springer.
Agarwal, S. & Frandsen, G. S. (2004). Binary GCD like Algorithms for Some Complex Quadratic Rings. In D. Buell (Ed.), Algorithmic Number Theory: 6th International Symposium, ANTS-VI, Burlington, VT, USA, June 13-18, 2004, Proceedings (pp. 57-71). Springer. https://doi.org/10.1007/978-3-540-24847-7_4
Ager, M. S. (2004). From Natural Semantics to Abstract Machines. BRICS Report Series, (RS-04-20).
Ager, M. S., Biernacki, D., Danvy, O. & Midtgaard, J. (2003). A Functional Correspondence Between Evaluators and Abstract Machines. In K. Sagonas & D. Miller (Eds.), Proceedings of the 5th ACM SIGPLAN international conference on Principles and practice of declaritive programming (pp. 8-19). Association for Computing Machinery. https://doi.org/10.1145/888251.888254
Ager, M. S., Danvy, O. & Goldberg, M. (2002). A Symmetric Approach to Compilation and Decompilation. In T. Æ. Mogensen, D. Schmidt & H. Sudborough (Eds.), The Essence of Computation: Complexity, Analysis, Transformation (pp. 296-331). Springer. https://doi.org/10.1007/3-540-36377-7_14
Ager, M. S., Danvy, O. & Rohde, H. K. (2003). Fast Partial Evaluation of Pattern Matching in Strings. In Proceedings of the 2003 ACM SIGPLAN workshop on Partial evaluation and semantics-based program manipulation (pp. 3-9). Association for Computing Machinery. https://doi.org/10.1145/777388.777390
Ager, M. S., Danvy, O. & Rohde, H. K. (2002). On obtaining Knuth, Morris, and Pratt's string matcher by partial evaluation. In K. Asai (Ed.), ASIA-PEPM '02 Proceedings of the ASIAN symposium on Partial evaluation and semantics-based program manipulation (pp. 32-46). Association for Computing Machinery. https://doi.org/10.1145/568173.568177
Eriksen, M. A., Buscher, M. & Christensen, M. (2003). Grounded Imagination: Dialogue in Context. Paper presented at Fieldworks - Dialogues between Art and Anthropology, Tate Modern Gallery, London, United Kingdom. http://www.tate.org.uk/modern/eventseducation/fieldworks
Alstrup, S., Brodal, G. S., Gørtz, I. L. & Rauhe, T. (2001). Time and Space Efficient Multi-Method Dispatching. Electronic Colloquium on Computational Complexity, (ITU-TR-2001-8).
Alstrup, S., Brodal, G. S., Gørtz, I. L. & Rauhe, T. (2002). Time and Space Efficient Multi-Method Dispatching. In M. Penttonen & E. M. Schmidt (Eds.), Algorithm Theory — SWAT 2002: 8th Scandinavian Workshop on Algorithm Theory Turku, Finland, July 3–5, 2002 Proceedings (pp. 20-29). Springer. https://doi.org/10.1007/3-540-45471-3_3
Alstrup, S., Brodal, G. S. & Rauhe, T. (2001). Optimal Static Range Reporting in One Dimension. In Proceedings of the thirty-third annual ACM symposium on Theory of computing (pp. 476-482). Association for Computing Machinery. https://doi.org/10.1145/380752.380842
Amtoft, T., Consel, C., Danvy, O. & Malmkjær, K. (2001). The Abstraction and Instantiation of String-Matching Programs. BRICS Report Series, (RS-01-12).
Amtoft, T., Consel, C., Danvy, O. & Malmkjær, K. (2002). The Abstraction and Instantiation of String-Matching Programs. In T. Mogensen, D. Schmidt & H. Sudborough (Eds.), The Essence of Computation: Complexity, Analysis, Transformation (pp. 332-357). Springer. https://doi.org/10.1007/3-540-36377-7_15
Andersen, H. M. & Schultz, U. P. (2004). Declarative Specialization for Object-Oriented-Program Specialization. Paper presented at ACM SIGPLAN 2004 Symposium on Partial Eveluation and Program Manipulation (PEPM'04), Verona, Italy.
Andersen, J. R., Bak, L., Grarup, S., Lund, K. V., Eskildsen, T., Hansen, K. M. & Torgersen, M. (2004). Design, Implementation, and Evaluation of the Resilient Smalltalk Embedded Platform. In Proceedings of the 12th European Smalltalk User Group (ESUG) Conference
Arge, L. (2004). External Geometric Data Structures. In Computing and Combinatorics: 10th Annual International Conference, COCOON 2004, Jeju Island, Korea, August 17-20, 2004. Proceedings (pp. 1). Springer. https://doi.org/10.1007/978-3-540-27798-9_1
Arge, L., Brodal, G. S. & Toma, L. (2004). On External-Memory MST, SSP and Multi-Way Planar Graph Separation. Journal of Algorithms, 53(2), 186-206.
Arge, L., Meyer, U. & Toma, L. (2004). External Memory Algorithms for Diameter and All-Pair Shortest-Paths on Sparse Graphs. In J. Diaz, J. Karhumäki, A. Lepistö & D. Sannella (Eds.), Automata, Languages and Programming: 31st International Colloquium, ICALP 2004, Turku, Finland, July 12-16, 2004. Proceedings (pp. 146-157). Springer. https://doi.org/10.1007/978-3-540-27836-8_15
Arge, L., Samoladas, V. & Yi, K. (2004). Optimal External-Memory Planar Point Enclosure. In S. Albers & T. Radzik (Eds.), Algorithms - ESA 2004: 12th Annual European Symposium, Bergen, Norway, September 14-17, 2004. Proceedings (pp. 40-52). Springer.
Arge, L. & Toma, L. (2004). Simplified External Memory Algorithms for Planar DAGS. In Proceedings of the 9th Scandinavian Workshop on Algorithm Theory, Humlebaek, Denmark, July 8-10, 2004. (3111 i Lecture Notes in Computer Science ed., Vol. 3111/2004, pp. 493-503). Springer.
Arge, L. & Vahrenhold, J. (2004). I/O-Efficient Dynamic Planar Point Location. Computational Geometry, 29(2), 147-162. https://doi.org/10.1016/j.comgeo.2003.04.001
Astesiano, E., Bidoit, M., Krieg-Brückner, B., Mosses, P. D., Sannella, D. & Tarlecki, A. (2002). CASL: The Common Algebraic Specification Language. Theoretical Computer Science, 286(2), 153-196.
Balat, V. & Danvy, O. (2002). Memorization in Type-Directed Partial Evaluation. In D. Batory, C. Consel & W. Taha (Eds.), Generative Programming and Component Engineering: ACM SIGPLAN/SIGSOFT Conference, GPCE 2002 Pittsburgh, PA, USA, October 6–8, 2002 Proceedings (pp. 78-92). Springer. https://doi.org/10.1007/3-540-45821-2_5
Barak, B., Canetti, R., Nielsen, J. B., Pass, R. & IEEE (Ed.) (2004). Universally Composable Protocols with Relaxed Set-Up Assumptions. In Ikke angivet (pp. 186-195). IEEE Press.
Bardram, J. E. (2003). Hospitals of the Future - Ubiquitous Computing support for Medical Work in Hospitals. In J. E. Bardram, I. Korhonen, A. Mihailidis & D. Wan (Eds.), Ubicom 2003: Fifth International Conference on Ubiquitous Computing: Seattle, Washington, USA (Vol. ubicom2003, pp. Artikel 13). Ubicomp.
Bardram, J. E. & Christensen, H. B. (2001). Middleware for Pervasive Healthcare - A White Paper. In B. Guruduth (Ed.), Proceedings of Advanced Topic Workshop -- Middleware for Mobile Computing University of Arizona Press. http://www.cs.arizona.edu/mmc/Program.html
Bardram, J. E. (2004). Activity-Based Support for Mobility and Collaboration in Ubiquitous Computing. In L. Baresi, S. Dustdar, H. Gall & M. Matera (Eds.), Ubiquitous Mobile Information and Collaboration Systems (Lecture Notes in Computer Science ed., Vol. 3272, pp. 169-184). Springer.
Bardram, J. E. (2004). Applications of Context-Aware Computing in Hospital Work - Examples and Design Principles. In 2004 ACM Symposium on Applied Computing: Proceedings of the 2004 ACM symposium on Applied computing (Vol. SESSION: Ubiquitous computing (UC), pp. 1574-1579). Association for Computing Machinery.
Bardram, J. E. (2004). Special issue on Pervasive Healthcare. (8(3) of IEEE Trans. on Inf. Tech. in Biomedicine ed.) IEEE Press.
Bardram, J. E., Adlam, T. (Ed.), Wactlar, H. (Ed.) & Korhonen, I. (Ed.) (2004). The Personal Medical Unit - A Ubiquitous Computing Infrastructure for Personal Pervasive Healthcare. In UbiHealth 2004: The 3nd International Workshop on Ubiquitous Computing for Pervasive Healthcare Applications (Nottingham, England ) UbiComp.org Community.
Bardram, J. E., Bossen, C., Dourish, P. (Ed.), Fitzpatrick, G. (Ed.), Schmidt, K. (Ed.), Kuutti, K. (Ed.) & Karsten, E. H. (Ed.) (2003). Moving to get aHead: Local Mobility and Collaborative Work. In ECSCW' 03: Proceedings of the eighth conference on European Conference on Computer Supported Cooperative Work (Vol. ECSCW, pp. 355-374). Kluwer Academic Publishers.
Bardram, J. E., Bossen, C., Lykke-Olesen, A., Madsen, K. H., Nielsen, R. & MacDonald, N. (Ed.) (2002). Virtual Video Prototyping of Pervasive Healthcare Systems. In Proceedings of the conference on Designing interactive systems: processes, practices, methods, and techniques (pp. 167-177). Association for Computing Machinery.
Bardram, J. & Christensen, H. B. (2004). Open Issues in Activity-Based and Task-Level Computing. In Proceedings of First International Workshop on Computer Support for Human Tasks and Activities (PB-2004-60 of Cent. for Pervasive Comp. Tech. Rep ed., pp. 56-61). Aarhus University.
Bardram, J. (Ed.), Christensen, H. B. (Ed.), Garlan, D. & Sousa, J. (2004). First International Workshop on Computer Support for Human Tasks and Activities. (PB-2004-60 ed.) Center for Pervasive Computing Tech. Report.
Bardram, J., Christensen, H. B. & Hansen, K. M. (2004). Architectural Prototyping: An Approach for Grounding Architectural Design and Learning. In Proceedings of the Fourth Working IEEE/IFIP Conference on Software Architecture: (Wisca 2004) (pp. 15-24). IEEE Computer Society Press.
Bardram, J. E., Kjær, T. A. K. & Nielsen, C. (2003). Supporting Local Mobility in Healthcare by Application Roaming among Heterogeneous Devices. In Lecture Notes in Computer Science: Proceedings of the Fifth International Conference on Human Computer Interaction with Mobile Devices and Services (Vol. 2795, pp. 161-176). Springer.
Bardram, J. E., Larsen, S. B., Mamykina, L. (Ed.), Bardram, J. E. (Ed.), Korhonen, I. (Ed.), Mynatt, E. D. (Ed.) & Pratt, W. (Ed.) (2004). Hopper's Home and Hopper's Hospital: Usability Laboratories for Home Care. In The CHI2004 workshop on HCI and Homecare: Connecting Families and Clinicians
Basin, D. A., Danvy, O. & Harper, R. (2004). Editorial. Higher-Order and Symbolic Computation, 17(3), 171-171. https://doi.org/10.1023/B:LISP.0000029480.20108.7d

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Marghoub, A., Kéver, L., Williams, C. J. A., Abzhanov, A., Vickaryous, M., Herrel, A., Evans, S. E. & Moazen, M. (2023). The role of cranial osteoderms on the mechanics of the skull in scincid lizards. Anatomical Record, 306(10), 2415-2424. https://doi.org/10.1002/ar.25168
Mantoani, M. C., Martins, J. A., Martins, L. D., Carotenuto, F., Šantl-Temkiv, T., Morris, C. E., Rodrigues, F. & Gonçalves, F. L. T. (2023). Thirty-Five Years of Aerosol–PBAP in situ Research in Brazil: The Need to Think outside the Amazonian Box. Climate, 11(1), Article 17. https://doi.org/10.3390/cli11010017
Zhou, P., Ye, S., Xie, L., Krauss, K. W., Pei, L., Chapman, S. K., Brix, H., Laws, E. A., Yuan, H., Yang, S., Ding, X. & Xie, S. (2023). Tidal restriction likely has greater impact on the carbon sink of coastal wetland than climate warming and invasive plant. Plant and Soil, 492(1-2), 135-156. https://doi.org/10.1007/s11104-023-06160-x
Martín-Hernanz, S., Nogales, M., Valente, L., Fernández-Mazuecos, M., Pomeda-Gutiérrez, F., Cano, E., Marrero, P., Olesen, J. M., Heleno, R. & Vargas, P. (2023). Time-calibrated phylogenies reveal mediterranean and pre-mediterranean origin of the thermophilous vegetation of the Canary Islands. Annals of botany, 131(4), 667-684. https://doi.org/10.1093/aob/mcac160
Zhang, L., Wang, H., Gessner, J., Congiu, L., Haxton, T. J., Jeppesen, E., Svenning, J. C. & Xie, P. (2023). To save sturgeons, we need river channels around hydropower dams. Proceedings of the National Academy of Sciences (PNAS), 120(13), Article e2217386120. https://doi.org/10.1073/pnas.2217386120
Brown, K. A., Bunting, M. J., Carvalho, F., de Bello, F., Mander, L., Marcisz, K., Mottl, O., Reitalu, T. & Svenning, J. C. (2023). Trait-based approaches as ecological time machines: Developing tools for reconstructing long-term variation in ecosystems. Functional Ecology, 37(10), 2552-2569. https://doi.org/10.1111/1365-2435.14415
Lu, K., Jähnig, S. C., Wu, H., Xie, Z., Chen, X. & He, F. (2023). Trait-based approach of aquatic insects to track recovery of wetland ecosystems in Northeast China. Ecological Indicators, 155, Article 111012. https://doi.org/10.1016/j.ecolind.2023.111012
Timóteo, S., Albrecht, J., Rumeu, B., Norte, A. C., Traveset, A., Frost, C. M., Marchante, E., López-Núñez, F. A., Peralta, G., Memmott, J., Olesen, J. M., Costa, J. M., da Silva, L. P., Carvalheiro, L. G., Correia, M., Staab, M., Blüthgen, N., Farwig, N., Hervías-Parejo, S. ... Heleno, R. (2023). Tripartite networks show that keystone species can multitask. Functional Ecology, 37(2), 274-286. https://doi.org/10.1111/1365-2435.14206
Schmitz, O. J., Sylvén, M., Atwood, T. B., Bakker, E. S., Berzaghi, F., Brodie, J. F., Cromsigt, J. P. G. M., Davies, A. B., Leroux, S. J., Schepers, F. J., Smith, F. A., Stark, S., Svenning, J. C., Tilker, A. & Ylänne, H. (2023). Trophic rewilding can expand natural climate solutions. Nature Climate Change, 13(4), 324–333. https://doi.org/10.1038/s41558-023-01631-6
Sâm, L. Ý. N., Baker, W. J., Bellot, S., Dransfield, J., Eiserhardt, W. L. & Henderson, A. (2023). Truongsonia (Arecaceae: Arecoideae: Truongsonieae)—a new palm genus and tribe from Vietnam. Phytotaxa, 613(3), 201-212. https://doi.org/10.11646/phytotaxa.613.3.1
Mikkelsen, P. S. (2023). Tusind dage med SIRIUS. (4 ed.) Xsirius Books.
Abraham, A. J., Duvall, E., Ferraro, K., Webster, A. B., Doughty, C. E., le Roux, E. & Ellis-Soto, D. (2023). Understanding anthropogenic impacts on zoogeochemistry is essential for ecological restoration. Restoration Ecology, 31(3), Article e13778. https://doi.org/10.1111/rec.13778
Donfrancesco, V., Allen, B. L., Appleby, R., Behrendorff, L., Conroy, G., Crowther, M. S., Dickman, C. R., Doherty, T., Fancourt, B. A., Gordon, C. E., Jackson, S. M., Johnson, C. N., Kennedy, M. S., Koungoulos, L., Letnic, M., Leung, L. K. P., Mitchell, K. J., Nesbitt, B., Newsome, T. ... Cairns, K. M. (2023). Understanding conflict among experts working on controversial species: A case study on the Australian dingo. Conservation Science and Practice, 5(3), Article e12900. https://doi.org/10.1111/csp2.12900
Pos, E., de Souza Coelho, L., de Andrade Lima Filho, D., Salomão, R. P., Amaral, I. L., de Almeida Matos, F. D., Castilho, C. V., Phillips, O. L., Guevara, J. E., de Jesus Veiga Carim, M., López, D. C., Magnusson, W. E., Wittmann, F., Irume, M. V., Martins, M. P., Sabatier, D., da Silva Guimarães, J. R., Molino, J. F., Bánki, O. S. ... ter Steege, H. (2023). Unraveling Amazon tree community assembly using Maximum Information Entropy: a quantitative analysis of tropical forest ecology. Scientific Reports, 13(1), Article 2859. https://doi.org/10.1038/s41598-023-28132-y
Bonte, D., Rose, C., Bastiaensen, T., Jesper Bechsgaard, J., Bilde, T., Dahirel, M., De Wolf, K., Thylys, H., Uytterschaut, T. & Vanthournout, B. (2023). Urbanization impacts short- but not long-distance natal dispersal in a common orb web spider. Oikos, 2023(12), Article e10278. https://doi.org/10.1111/oik.10278
Hsu, Y. H. H., Pintacuda, G., Liu, R., Nacu, E., Kim, A., Tsafou, K., Petrossian, N., Crotty, W., Suh, J. M., Riseman, J., Martin, J. M., Biagini, J. C., Mena, D., Ching, J. K. T., Malolepsza, E., Li, T., Singh, T., Ge, T., Egri, S. B. ... Wellcome Trust Case Control Consortium (2023). Using brain cell-type-specific protein interactomes to interpret neurodevelopmental genetic signals in schizophrenia. iScience, 26(5), Article 106701. https://doi.org/10.1016/j.isci.2023.106701
Wich, S. A., Bonnin, N., Hutschenreiter, A., Piel, A. K., Chitayat, A., Stewart, F. A., Pintea, L. & Kerby, J. T. (2023). Using Drones to Determine Chimpanzee Absences at the Edge of Their Distribution in Western Tanzania. Remote Sensing, 15(8), Article 2019. https://doi.org/10.3390/rs15082019
Davison, C. W., Assmann, J. J., Normand, S., Rahbek, C. & Morueta-Holme, N. (2023). Vegetation structure from LiDAR explains the local richness of birds across Denmark. Journal of Animal Ecology, 92(7), 1332-1344. https://doi.org/10.1111/1365-2656.13945
Montes, C. A., Ortiz, N. V., Arias, C. A. & Chaparro, T. R. (2023). Vertical flow wetlands as the core for the sustainable treatment of coffee wastewater in small communities in Colombia: preliminary results . Water science and technology : a journal of the International Association on Water Pollution Research, 88(8), 1974-1981. https://doi.org/10.2166/wst.2023.328
Panyadee, P., Wangpakapattanawong, P., Inta, A. & Balslev, H. (2023). Very High Food Plant Diversity among Ethnic Groups in Northern Thailand. Diversity, 15(1), Article 120. https://doi.org/10.3390/d15010120
Nachtsheim, D. A., Johnson, M., Schaffeld, T., van Neer, A., Madsen, P. T., Findlay, C. R., Rojano-Doñate, L., Teilmann, J., Mikkelsen, L., Baltzer, J., Ruser, A., Siebert, U. & Schnitzler, J. G. (2023). Vessel noise exposures of harbour seals from the Wadden Sea. Scientific Reports, 13, Article 6187. https://doi.org/10.1038/s41598-023-33283-z
Rysgaard, S. (2023). Water masses along west Greenland and their implication for glacier melt. Abstract from Arctic International Technical Conference, Nuuk, Ecuador.
Nielsen, L. (2023). Water Uptake of Airborne Primary Bioaerosols. [PhD thesis, Aarhus University]. Aarhus Universitet.
Pulido, F., Castagneyrol, B., Rodríguez-Sánchez, F., Cáceres, Y., Pardo, A., Moracho, E., Kollmann, J., Valladares, F., Ehrlén, J., Jump, A. S., Svenning, J. C. & Hampe, A. (2023). Widespread latitudinal asymmetry in the performance of marginal populations: A meta-analysis. Global Ecology and Biogeography, 32(6), 842-854. https://doi.org/10.1111/geb.13665
Catalán, N., Anton-Pardo, M., Freixa, A., Rodríguez-Lozano, P., Bartrons, M., Bernal, S., Genua-Olmedo, A., Mendoza-Lera, C., Onandía, G., Benito, X., Sánchez-Montoya, M. M., Cañedo-Argüelles Iglesias, M., Pastor, A. & Lupon, A. (2023). Women in limnology: From a historical perspective to a present-day evaluation. Wiley Interdisciplinary Reviews. Water, 10(1), Article e1616. https://doi.org/10.1002/wat2.1616
Irschick, D. J., Christiansen, F., Hammerschlag, N., Martin, J., Madsen, P. T., Wyneken, J., Brooks, A., Gleiss, A., Fossette, S., Siler, C., Gamble, T., Fish, F., Siebert, U., Patel, J., Xu, Z., Kalogerakis, E., Medina, J., Mukherji, A., Mandica, M. ... Lauder, G. (2022). 3D visualization processes for recreating and studying organismal form. iScience, 25(9), Article 104867. https://doi.org/10.1016/j.isci.2022.104867
Baker, W. J., Bailey, P., Barber, V., Barker, A., Bellot, S., Bishop, D., Botigué, L. R., Brewer, G., Carruthers, T., Clarkson, J. J., Cook, J., Cowan, R. S., Dodsworth, S., Epitawalage, N., Françoso, E., Gallego, B., Johnson, M. G., Kim, J. T., Leempoel, K. ... Forest, F. (2022). A Comprehensive Phylogenomic Platform for Exploring the Angiosperm Tree of Life. Systematic Biology, 71(2), 301-319. https://doi.org/10.1093/sysbio/syab035
Zhang, Y., Wang, L., He, Y., Huang, N., Li, W., Xu, S., Zhou, Q., Song, W., Duan, W., Wang, X., Muhammad, S., Nath, B., Zhu, L., Tang, F., Du, H., Wang, L. & Niu, Z. (2022). A Continuous Change Tracker Model for Remote Sensing Time Series Reconstruction. Remote Sensing, 14(9), Article 2280. https://doi.org/10.3390/rs14092280
Shartau, R. B., Harter, T. S., Baker, D. W., Aboagye, D. L., Allen, P. J., Val, A. L., Crossley, D. A., Kohl, Z. F., Hedrick, M. S., Damsgaard, C. & Brauner, C. J. (2022). Acute CO2 tolerance in fishes is associated with air breathing but not the Root effect, red cell βNHE, or habitat. Comparative Biochemistry and Physiology -Part A : Molecular and Integrative Physiology, 274, Article 111304. https://doi.org/10.1016/j.cbpa.2022.111304
Aagaard, A. (2022). Adaptation and plasticity in a social spider species with low genetic diversity. [PhD thesis, Aarhus University]. Aarhus Universitet.