Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Thomsen, K. (2007). The homoclinic and heteroclinic C*-algebras of a generalized one-dimensional solenoid. Department of Mathematical Sciences , University of Aarhus. http://www.imf.au.dk/publs?id=667

Polerecky, L., Bachar, A., Schoon, R., Grinstein, M., Jørgensen, B. B., de Beer, D. & Jonkers, H. M. (2007). Contribution of Chloroflexus respiration to oxygen cycling in a hypersaline microbial mat from Lake Chiprana, Spain. Environmental Microbiology, 9(8), 2007-2024. https://doi.org/10.1111/j.1462-2920.2007.01317.x

Preisler, A., de Beer, D., Lichtschlag, A., Lavik, G., Boetius, A. & Jørgensen, B. B. (2007). Biological and chemical sulfide oxidation in a Beggiatoa inhabited marine sediment. The Isme Journal, 1, 341-353. https://doi.org/10.1038/ismej.2007.50

Dmitriev, A., Pakizeh, T., Rindzevicius, T., Käll, M. & Sutherland, D. (2007). Gold-silica-gold nanosandwiches - tunable bimodal plasmonic resonators. Small, 3(2), 294-299.

Dalby, M. J., Gadegaard, N., Agheli, H., Sutherland, D. & Wilkinson, C. D. W. (2007). Group analysis of regulation of fibroblast genome on low adhesion surfaces. Biomaterials, 28(10), 1761-1769.

Andersson, K. S., Gläsmaster, K., Hanarp, P., Seantier, B. & Sutherland, D. (2007). Patterning colloidal monolayer films with micro contact particle stripping. Nanotechnology, 18.

Dalby, M. J., Gadegaard, N., Herzyk, P., Sutherland, D., Agheli, H., Wilkinson, C. D. W. & Curtis, A. S. G. (2007). Nanomechanotransduction and Interphase Nuclear Organization; Influence on Genomic Control. Journal of Cellular Biochemistry, 102, 1234-1244. https://doi.org/10.1002/jcb.21354

Berry, C. C., Curtis, A. C. G., Oreffo, R. O. C., Agheli, H. & Sutherland, D. (2007). Human fibroblast and human bone marrow cell response to lithographically nanopatterned adhesive domains on protein rejecting substrates. I E E E Transactions on NanoBioscience, 6(3), 201-9. https://doi.org/10.1109/TNB.2007.903457

Frederiksson, H., Alaverdyan, Y., Dmitriev, A., Langhammer, C., Sutherland, D., Zäch, M. & Kasmeo, B. (2007). Hole-Mask Colloidal Lithography. Advanced Materials, 19(23), 4297-4302.

Larsen, P., Dueholm, M. S., Christiansen, G., Nielsen, J. L., Otzen, D. & Nielsen, P. H. (2007). Amyloid adhesins are abundant in natural biofilms. Env. Microbiol., (9), 3077-3090.

Sehgal, P., Bang Nielsen, S., Pedersen, S., Wimmer, R. & Otzen, D. (2007). Modulation of cutinase structure and stability by phospholipid detergents. Biochim. Biophys. Acta., (1774), 1544-1554.

D'Hondt, S., Inagaki, F., Ferdelman, T., Jørgensen, B. B., Kato, K., Kemp, P., Sobecky, P., Sogin, M. & Takai, K. (2007). Exploring subseafloor life with the integrated ocean drilling program. Scientific Drilling, 5, 26-37. https://doi.org/10.2204/iodp.sd.5.03.2007

Jørgensen, B. B. & Boetius, A. (2007). Feast and famine - microbial life in the deep-sea bed. Nature Review Microbiology, 5, 770-781.

Dalsgaard, T. K., Otzen, D., Nielsen, J. H. & Larsen, L. B. (2007). Changes in structures of milk proteins upon photo-oxidation. J. Agr. Food Chem., (55), 10968-10976.

Otzen, D. & Nielsen, P. H. (2007). We find them here, we find them there: Functional bacterial amyloid. Cellular and Molecular Life Sciences, 65, 910-927.

Wakeham, S. G., Amann, R., Freemann, K. H., Hopmans, E. C., Jørgensen, B. B., Putnam, I. F., Schouten, S., Damsté, J. S. S., Talbot, H. & Woebken, D. (2007). Microbial ecology of the stratified water column of the Black Sea as revealed by a comprehensive biomarker study. Organic Geochemistry, 38, 2070-2097. https://doi.org/10.1016/j.orggeochem.2007.08.003

Friggens, N. & Labouriau, R. (2007). Effet du numéro d'oestrus et du nombre de jours après le vêlage sur la probabilité de conception chez les vaches laitières. In 14e Journées 3R - 2007 (pp. 367-370) http://www.inst-elevage.asso.fr/html28/texte.php3?id_article=2551

Zopfi, J. & Jørgensen, B. B. (2007). Biogeochemistry of sulfur and iron in Thioploca-colonized surface sediments in the upwelling area off central Chile. Geochimica et Cosmochimica Acta, 72, 827-843. https://doi.org/10.1016/j.gca.2007.11.031

Song, Y. J. C., Lundvig, D. M. S., Huang, Y., Gai, W. P., Blumbergs, P. C., Højrup, P., Otzen, D., Halliday, G. M. & Jensen, P. H. (2007). p25a Relocalizes in Oligodendroglia from Myelin to Cytoplasmic Inclusions in Multiple System Atrophy. Am. J. Path., (171), 1291-1303.

Knudsen, N. T., Yde, J. C., Christiansen, H. H., Riger-Kusk, M. & Humlum, O. (2008). Hydrochemical characteristics of bulk meltwater from an entire ablation season, Longyearbreen, Svalbard. Journal of Glaciology, 54, 259-272.

Knudsen, N. T. & Yde, J. C. (2007). 20th century glacier fluctuations on Disko Island (Qeqertarsuaq), Greenland. Annals of Glaciology, 46, 209-214.

Knudsen, N. T. & Yde, J. C. (2006). Sermilik Stationen - vigtig udpost i forståelsen af klimaændringer. Geologisk Nyt, 1/06, 16-19.

Knudsen, N. T. & Yde, J. C. (2007). Mindre gletschere og klimaet - metoder, komplikationer og resultater. Geologisk Nyt, 2/07, 34-36.

Ørsted, B. & Speh, B. (2007). Branching laws for some unitary representations of GL(4, R). In Harmonische Analysis und Darstellungstheorie Topologischer Gruppen: October 14th - October 20th, 2007 (pp. 35-37). Mathematisches Forschungsinstitut Oberwolfach. http://www.mfo.de/programme/schedule/2007/42/OWR_2007_49.pdf

Nielsen, A. F., Leuschner, P. J. F. & Martinez, J. (2007). Not miR-ly a splicing factor: hnRNP A1 succumbs to microRNA temptation. Nature Structural and Molecular Biology, 14(7), 572-3. https://doi.org/10.1038/nsmb0707-572

Andersen, K. R., Overgaard, M., Gerdes, K. & Brodersen, D. E. (2006). Structural studies of the toxin-antitoxin proteins RelE and RelB from E. coli. Poster session presented at the 38th crystallographic meeting at Erice, Erice, Italy.

Andersen, K. R. & Brodersen, D. E. (2005). RNA quality control in yeast - what is good and what is bad?. Abstract from CoLuAa 2005, København, Denmark.

Andersen, K. R., Jonstrup, A. T., Van, L. B. & Brodersen, D. E. (2007). Applying the breaks on gene expression - mRNA deadenylation by Pop2p. Abstract from CoLuAa 2007, Århus, Denmark.

Feddersen, A., Jonstrup, A. T. & Brodersen, D. E. (2007). Structural Studies of the Yeast Mitochondrial Degradosome. Poster session presented at CoLuAa 2007, Århus, Denmark.

Bøggild, A., Nielsen, J. S., Nielsen, G., Valentin-Hansen, P. & Brodersen, D. E. (2007). Crystal Structure of an Hfq-like protein from Methanococcus jannaschii. Poster session presented at CoLuAa 2007, Århus, Denmark.

Lauridsen, C., Yong, C., Halekoh, U., Bügel, S. H., Brandt, K., Christensen, L. P. & Jørgensen, H. (2008). Rats show differences in some biomarkers of health when eating diets based on ingredients produced with three different cultivation strategies. Journal of the Science of Food and Agriculture, 88(4), 720–732. https://doi.org/10.1002/jsfa.3142

Finster, K., Hansen, A. A., Jensen, L. L., Mikkelsen, K., Kristoffersen, T., Merrison, J., Nørnberg, P. & Lomstein, B. A. (2007). Mars simulation experiments with complex microbial soil communities. In C. Cockell & G. Hornbeck (Eds.), ROME: Response of Organisms to the Martian Environment (pp. 59-73)

Feddersen, A., Jonstrup, A. T. & Brodersen, D. E. (2005). Structural Studies of the Yeast Mitochondrial Degradosome. Abstract from CoLuAa 2005, København, Denmark.

Stetkær, H. (2007). Properties of d'Alembert functions. Department of Mathematical Sciences , University of Aarhus. http://www.imf.au.dk/publs?id=657

He, X. & Thomsen, J. F. (2007). Geometry of $B\times B$-orbit closures in equivariant embeddings. Advances in Mathematics, 216, 626-646. https://doi.org/10.1016/j.aim.2007.06.001

Bucur, D. & Nielsen, M. (2008). Secure Data Flow in a Calculus for Context Awareness. Lecture Notes in Computer Science, 5065, 439-456. https://doi.org/10.1007/978-3-540-68679-8_27

Kristensen, B. B., Madsen, O. L. & Møller-Pedersen, B. (2007). The When, Why and Why not of the BETA Programming Language. In Proceedings of the Third ACM Conference on History of Programming Languages (pp. 1-57). Association for Computing Machinery. https://doi.org/10.1145/1238844.1238854

Justesen, J., Hokland, P. & Hokland, M. (1986). The interferon/2-5A synthetase system in primary preleukaemia patients. Progress in clinical and biological research, 202, 439-47.

Hokland, M., Basse, P., Justesen, J. & Hokland, P. (1989). IFN-induced modulation of histocompatibility antigens on human cells. Background, mechanisms and perspectives. Cancer and Metastasis Reviews, 7(3), 193-207.

Nielsen, B., Hokland, M., Justesen, J., Hasselbalch, H., Ellegaard, J. & Hokland, P. (1989). Immunological recovery and dose evaluation in IFN-alpha treatment of hairy cell leukemia: analysis of leukocyte differentiation antigens, NK and 2',5'-oligoadenylate synthetase activity. European Journal of Haematology, 42(1), 50-9.

Jensen, A. W., Hokland, P., Jørgensen, H., Justesen, J. & Hokland, M. (1992). Nye terapeutiske styringsmuligheder ved leukaemi. Nordisk Medicin, 106(12), 336-9.

Jensen, A. W., Hokland, M., Jørgensen, H., Justesen, J., Ellegaard, J. & Hokland, P. (1991). Solitary expression of CD7 among T-cell antigens in acute myeloid leukemia: identification of a group of patients with similar T-cell receptor beta and delta rearrangements and course of disease suggestive of poor prognosis. Blood, 78(5), 1292-300.

Jensen, A. W., Hokland, P., Kristensen, J. S., Justesen, J. & Hokland, M. (1992). Evolution of Ig- and T-cell receptor gene configuration in a Ph1+ hybrid leukemia patient. European Journal of Haematology, 48(2), 105-109. https://doi.org/10.1111/j.1600-0609.1992.tb00574.x

Madsen, P. S., Nielsen, B., Jensen, A. W., Justesen, J., Ellegaard, J., Hokland, P. & Hokland, M. (1992). Induced and down-regulated proteins in the human cultured hairy cell leukemia line JOK-1 and the Burkitt's lymphoma cell line Daudi during incubation with interferon-alpha: a kinetic study. Journal of interferon research, 12(5), 345-53.

Clemmensen, L. B., Pedersen, K., Murray, A. & Heinemeier, J. (2006). A 7000-year record of coastal evolution, Vejers, SW Jutland, Denmark. Bulletin of the Geological Society of Denmark, 53.

Møller, A. (2008). Static Analysis for Event-Based XML Processing. In PLAN-X: Programming Language Technologies for XML: An ACM SIGPLAN Workshop colocated with POPL 2008 (pp. 18-27). Universität Trier.

Fischer, A., Richards, M., Olsen, J., Robinson, D. E., Bennike, P., Kubiak-Martens, L. & Heinemeier, J. (2007). The composition of mesolithic food: Evidence from a submerged settlement on the Argus Bank, Denmark. Acta Archaeologica, 78(2), 163-178.

Jørkov, M. L. S., Heinemeier, J. & Lynnerup, N. (2007). Evaluating bone collages extraction methods for stable isotope analysis in dietary studies. Journal of Archaeological Science, 34, 1824-1829.

Naysmith, P., Scott, E. M., Cook, G. T., Heinemeier, J., van der Plicht, J., Van Strydonck, M., Ramsey, C. B., Grootes, P. M. & Freeman, S. P. H. T. (2007). A cremated bone intercomparison study. Radiocarbon: An International Journal of Cosmogenic Isotope Research, 49(2), 403-408.

Plessis, A. D. & Wall, C. T. C. (2007). Hypersurfaces in pⁿ with 1-parameter symmetry groups II. Department of Mathematical Sciences , University of Aarhus. http://www.imf.au.dk/publs?id=663

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