Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Gondelman, L., Gregersen, S. O., Nieto, A., Timany, A. & Birkedal, L. (2021). Distributed causal memory: Modular specification and verification in higher-order distributed separation logic. Proceedings of the ACM on Programming Languages , 5(POPL), Article 42. https://doi.org/10.1145/3434323

Jacobs, K., Timany, A. & Devriese, D. (2021). Fully abstract from static to gradual. Proceedings of the ACM on Programming Languages , 5(POPL), Article 7. https://doi.org/10.1145/3434288

Gregersen, S. O., Bay, J., Timany, A. & Birkedal, L. (2021). Mechanized logical relations for termination-insensitive noninterference. Proceedings of the ACM on Programming Languages , 5(POPL), Article 10. https://doi.org/10.1145/3434291

Georges, A. L., Guéneau, A., Van Strydonck, T., Timany, A., Trieu, A., Huyghebaert, S., Devriese, D. & Birkedal, L. (2021). Efficient and provable local capability revocation using uninitialized capabilities. Proceedings of the ACM on Programming Languages , 5(POPL), Article 6. https://doi.org/10.1145/3434287

Gooday, A. J., Holzmann, M., Goetz, E., Cedhagen, T., Korsun, S. & Pawlowski, J. (2021). Three new species of Gromia (Protista, Rhizaria) from western Greenland fjords. Polar Biology, 44(6), 1037–1053 . https://doi.org/10.1007/s00300-021-02858-9

Cedhagen, T. (2021). Coral bleaching recorded during the Little Ice Age. Phuket Marine Biological Center. Research Bulletin, 78, 21-28. https://doi.org/10.14456/pmbcrb.2021.1

Cedhagen, T. (2021). Jørgen Hylleberg in memoriam. Phuket Marine Biological Center. Research Bulletin, 78, 5-8.

Cedhagen, T. (Ed.) (2020). Phuket Marine Biological Center Research Bulletin. Phuket Marine Biological Center. Phuket Marine Biological Center. Research Bulletin Vol. 77 https://www.dmcr.go.th/download/?file=q2MZMT1jMl50ATx0rS9jZT0lqmAZYJ03Mmu0A2x5rQqjAJ01qmOZAz0kMl10ZJxkrQqjZJ0jqmWZZT0lMl10MJyfrTyjMz0iq2IZoT1cM2M0Y2y0rTEjY21xq2SZo21fM3O0qJxirUEjo21iq3WZq213M3q0Y2x6rRZ%3Q&n=RESEARCH%20BULLETIN%2077.1&t=GT5gq2qxqS9cMUug&type=rQR%3Q&up=rQR%3Q&id=MmI0BJx5rQD%3Q

Brown, P., RELISH Consortium & Zhou, Y. (2019). Large expert-curated database for benchmarking document similarity detection in biomedical literature search. Database, 2019, 1-67. Article 085. https://doi.org/10.1093/database/baz085

Dupont Juhl, A., Lund, F. W., Jensen, M. L. V., Szomek, M., Würtz Heegaard, C., Guttmann, P., Werner, S., McNally, J., Schneider, G., Kapishnikov, S. & Wüstner, D. (2021). Niemann Pick C2 protein enables cholesterol transfer from endo-lysosomes to the plasma membrane for efflux by shedding of extracellular vesicles. Chemistry and Physics of Lipids, 235, Article 105047. https://doi.org/10.1016/j.chemphyslip.2020.105047

Haase, K. & Olsen, J. (2021). Building a high-resolution chronology of a medieval urban site through Bayesian modelling*. Archaeometry, 63(4), 860-877. https://doi.org/10.1111/arcm.12651

Marzocchi, U., Bonaglia, S., Zaiko, A., Quero, G. M., Vybernaite-Lubiene, I., Politi, T., Samuiloviene, A., Zilius, M., Bartoli, M. & Cardini, U. (2021). Zebra Mussel Holobionts Fix and Recycle Nitrogen in Lagoon Sediments. Frontiers in Microbiology, 11, Article 610269. https://doi.org/10.3389/fmicb.2020.610269

Jørgensen, A. C. S., Montalbán, J., Angelou, G. C., Miglio, A., Weiss, A., Scuflaire, R., Noels, A., Mosumgaard, J. R. & Silva Aguirre, V. (2021). On the impact of the structural surface effect on global stellar properties and asteroseismic analyses. Monthly Notices of the Royal Astronomical Society, 500(4), 4277-4295. https://doi.org/10.1093/mnras/staa3476

Zinn, J. C., Stello, D., Elsworth, Y., García, R. A., Kallinger, T., Mathur, S., Mosser, B., Bugnet, L., Jones, C., Hon, M., Sharma, S., Schönrich, R., Warfield, J. T., Luger, R., Pinsonneault, M. H., Johnson, J. A., Huber, D., Silva Aguirre, V., Chaplin, W. J. ... Miglio, A. (2020). The K2 Galactic Archaeology Program Data Release 2: Asteroseismic Results from Campaigns 4, 6, and 7. Astrophysical Journal Supplement Series, 251(2), 23. Article 23. https://doi.org/10.3847/1538-4365/abbee3

Rech, A. R., Ollerton, J., Dalsgaard, B., Ré Jorge, L., Sandel, B., Svenning, J. C., Baronio, G. J. & Sazima, M. (2021). Population-level plant pollination mode is influenced by Quaternary climate and pollinators. Biotropica, 53(2), 632-642. https://doi.org/10.1111/btp.12905

Addison, B. C., Wright, D. J., Nicholson, B. A., Cale, B., Mocnik, T., Huber, D., Plavchan, P., Wittenmyer, R. A., Vanderburg, A., Chaplin, W. J., Chontos, A., Clark, J. T., Eastman, J. D., Ziegler, C., Brahm, R., Carter, B. D., Clerte, M., Espinoza, N., Horner, J. ... Themessl, N. (2021). TOI-257b (HD 19916b): a warm sub-saturn orbiting an evolved F-type star. Monthly Notices of the Royal Astronomical Society, 502(3), 3704-3722. https://doi.org/10.1093/mnras/staa3960

Lundgren, E., Schowanek, S. D., Rowan, J., Middleton, O., Pedersen, R. Ø., Wallach, A. D., Ramp, D., Davis, M., Sandom, C. J. & Svenning, J.-C. (2021). Functional traits of the world’s late Quaternary large-bodied avian and mammalian herbivores. Scientific Data, 8(1), Article 17. https://doi.org/10.1038/s41597-020-00788-5

Inceoglu, F., Hernandez Marcano, N. J., Jacobsen, R. H. & Karoff, C. (2020). A General Overview for Localizing Short Gamma-Ray Bursts with a CubeSat Mega-Constellation. Frontiers in Astronomy and Space Sciences, 7(November), Article 573060. https://doi.org/10.3389/fspas.2020.573060

Bellinger, E. P., Basu, S. & Hekker, S. (2020). Inverse analysis of asteroseismic data: a review. In M. J. P. F. G. Monteiro, R. A. García, J. Christensen-Dalsgaard & S. W. McIntosh (Eds.), Dynamics of the Sun and Stars - Honoring the Life and Work of Michael J. Thompson: Honoring the Life and Work of Michael J. Thompson (pp. 171-183). Springer. https://doi.org/10.1007/978-3-030-55336-4_25

Song, H., Ordonez, A., Svenning, J.-C., Qian, H., Yin, X., Mao, L., Deng, T. & Zhang, J. (2021). Regional disparity in extinction risk: comparison of disjunct plant genera between eastern Asia and eastern North America. Global Change Biology, 27(9), 1904-1914. https://doi.org/10.1111/gcb.15525

Del Bello, E., Taddeucci, J., Merrison, J. P., Rasmussen, K. R., Andronico, D., Ricci, T., Scarlato, P. & Iversen, J. J. (2021). Field-based measurements of volcanic ash resuspension by wind. Earth and Planetary Science Letters, 554, Article 116684. https://doi.org/10.1016/j.epsl.2020.116684

Kolyaie, S., Treier, U., Bøcher, P. K., Tsirogiannis, C., Kania, A., Nabe-Nielsen, J. & Normand, S. (2020). Arctic vegetation mapping using ultra-high resolution images. Poster session presented at Nordic Oikos conference 2020
, Reykjavík, Iceland.

Chen, L., Enkegaard, A. & Sørensen, J. G. (2021). Temperature Affects Biological Control Efficacy: A Microcosm Study of Trichogramma achaeae. Insects, 12(2), Article 95. https://doi.org/10.3390/insects12020095

Kolyaie, S., Treier, U., Watmough, G. R., Bøcher, P. K., Madsen, B. & Normand, S. (2017). Multiple Images Classification Framework to Assist Ecological Field-based Measurements. Abstract from 3rd International Winter School on Big Data, University of Bari, Italy.

Mandal, S., Gopal, R., Srinivas, H., D’Elia, A., Sen, A., Sen, S., Richter, R., Coreno, M., Bapat, B., Mudrich, M., Sharma, V. & Krishnan, S. (2021). Coincident angle-resolved state-selective photoelectron spectroscopy of acetylene molecules: A candidate system for time-resolved dynamics. Faraday Discussions, 228, 242-265. https://doi.org/10.1039/D0FD00120A

Lykke, M. R., Becher, N. H., Haahr, T., Boedtkjer, E., Jensen, J. S. & Uldbjerg, N. (2021). Vaginal, cervical and uterine pH in women with normal and abnormal vaginal microbiota. Pathogens, 10(2), Article 90. https://doi.org/10.3390/pathogens10020090

Chimienti, M., van Beest, F., Beumer, L. T., Desforges, J.-P., Hansen, L. H., Stelvig, M. & Schmidt, N. M. (2021). Quantifying behavior and life-history events of an Arctic ungulate from year-long continuous accelerometer data. Ecosphere (Washington, D.C.), 12(6), Article e03565. https://doi.org/10.1002/ecs2.3565

Liu, F., Wang, Z., Wu, B., Bjerg, J. T., Hu, W., Guo, X., Guo, J., Nielsen, L. P., Qiu, R. & Xu, M. (2021). Cable bacteria extend the impacts of elevated dissolved oxygen into anoxic sediments. The ISME Journal, 15(5), 1551-1563. https://doi.org/10.1038/s41396-020-00869-8

Choquel, C., Geslin, E., Metzger, E., Filipsson, H., Risgaard-Petersen, N., Launeau, P., Giraud, M., Jauffrais, T., Jesus, B. & Mouret, A. (2021). Denitrification by benthic foraminifera and their contribution to N-loss from a fjord environment. Biogeosciences, 18(1), 327-341. https://doi.org/10.5194/bg-18-327-2021

Calvache, M. L., Sanchez-Ubeda, J. P., Purtschert, R., Lopez-Chicano, M., Martin-Montanes, C., Sueltenfuss, J., Blanco-Coronas, A. M. & Duque, C. (2020). Characterization of the functioning of the Motril–Salobreña coastal aquifer (SE Spain) through the use of environmental tracers. Environmental Earth Sciences, 79(6), Article 141. https://doi.org/10.1007/s12665-020-8852-5

Vollbrecht, C., Moehlenkamp, P., Gove, J., Neuheimer, A. B. & McManus, M. A. (2021). Long-term presence of the island mass effect at Rangiroa Atoll, French Polynesia. Frontiers in Marine Science, 7, Article 595294. https://doi.org/10.3389/fmars.2020.595294

Black, J., Neuheimer, A. B., Horn, PL., Tracey, DM. & Drazen, J. (2021). Environmental, evolutionary, and ecological drivers of slow growth in deep-sea demersal teleosts. Marine Ecology Progress Series, 658, 1-26. https://doi.org/10.3354/meps13591

Jensen, P. B., Ejrnæs, R. & Sørensen, K. W. (2019). Preliminary status of the present encyrtid fauna in Denmark (Hymenoptera, Encyrtidae). Entomologiske Meddelelser, 87(1-2), 55-64. https://danbif.dk/formidlingsarkiv/links/litteratur/entomologiske-meddelelser/bind-87/Encyrtidae.pdf

Guenther, N.-E., Schmidt, R., Bruun, G., Gurarie, V. & Massignan , P. (2021). Mobile impurity in a Bose-Einstein condensate and the orthogonality catastrophe. Physical Review A, 103(1), Article 013317 . https://doi.org/10.1103/PhysRevA.103.013317

Noji, M., Samejima, T., Yamaguchi, K., So, M., Yuzu, K., Chatani, E., Akazawa-Ogawa, Y., Hagihara, Y., Kawata, Y., Ikenaka, K., Mochizuki, H., Kardos, J., Otzen, D. E., Bellotti, V., Buchner, J. & Goto, Y. (2021). Breakdown of supersaturation barrier links protein folding to amyloid formation. Communications Biology, 4(1), Article 120. https://doi.org/10.1038/s42003-020-01641-6

Frederiksen, R. R., Christiansen, A. V., Vilhelmsen, T. N., Christensen, S. & Auken, E. (2020). A hectare-scale decision tool for nitrate retention estimation by integration of geophysical, geological, geochemical and hydrological data. Abstract from 14th Annual Conference of DWF 2020, Frederiksberg, Denmark.

Cronin, I. V., Jensen, J. L., Thomsen, I. K., Labouriau, R. & Hansen, E. M. (2021). Fertiliser N rates interact with sowing time and catch crops in cereals and affect yield and nitrate leaching. European Journal of Agronomy, 124, Article 126244. https://doi.org/10.1016/j.eja.2021.126244

Lund-Hansen, L. C., Petersen, C. M., Søgaard, D. H. & Sorrell, B. K. (2021). A comparison of decimeter scale variations of physical and photobiological parameters in a late winter first-year sea ice in southwest Greenland. Journal of Marine Science and Engineering, 9(1), 1-11. Article 60. https://doi.org/10.3390/jmse9010060

Cimoli, E., Lucieer, V., Meiners, K., Chennu, A., Castrisios, K., Ryan, K. G., Lund-Hansen, L. C., Martin, A., Kennedy, F. & Lucieer, A. (2020). Mapping the in situ micro spatial distribution of ice algal biomass through hyperspectral imaging of sea-ice cores. Scientific Reports, 10(1), Article 21848. https://doi.org/10.1038/s41598-020-79084-6

Lu, Y., Han, J., Ding, Q., Yue, Y., Xia, C., Ge, S., Van Le, Q., Dou, X., Sonne, C. & Lam, S. S. (2021). TEMPO-oxidized cellulose nanofibers/polyacrylamide hybrid hydrogel with intrinsic self-recovery and shape memory properties. Cellulose, 28(3), 1469-1488. https://doi.org/10.1007/s10570-020-03606-8

Kropp, H., Loranty, M. M., Natali, S. M., Kholodov, A. L., Rocha, A., Myers-Smith, I., Abbot, B. W., Abermann, J., Blanc-Betes, E., Blok, D., Blume-Werry, G., Boike, J., Breen, A. L., Cahoon, S. M. P., Christiansen, C. T., Douglas, T. A., Epstein, H. E., Frost, G., Goeckede, M. ... Lund, M. (2021). Shallow soils are warmer under trees and tall shrubs across Arctic and Boreal ecosystems. Environmental Research Letters, 16(1), Article 015001. https://doi.org/10.1088/1748-9326/abc994

Dissanayake, P. D., Sonne, C., Cho, W. C., Kim, C. H. & Ok, Y. S. (2020). South Korea's big move to hydrogen society. Cogent environmental science, 6(1), Article 1856459. https://doi.org/10.1080/23311843.2020.1856459

Lembrechts, J. J., Aalto, J., Ashcroft, M. B., De Frenne, P., Kopecký, M., Lenoir, J., Luoto, M., Maclean, I. M. D., Roupsard, O., Fuentes-Lillo, E., García, R. A., Pellissier, L., Pitteloud, C., Alatalo, J. M., Smith, S. W., Björk, R. G., Muffler, L., Ratier Backes, A., Cesarz, S. ... Nuñez, M. A. (2020). SoilTemp: A global database of near-surface temperature. Global Change Biology, 26(11), 6616-6629. https://doi.org/10.1111/gcb.15123

Maresova, J., Suchackova Bartonova, A., Konvicka, M., Høye, T. T., Gilg, O., Kresse, J. C., Shapoval, N. A., Yakovlev, R. V. & Faltynek Fric, Z. (2021). The story of endurance: Biogeography and the evolutionary history of four Holarctic butterflies with different habitat requirements. Journal of Biogeography, 48(3), 590-602. https://doi.org/10.1111/jbi.14022

Bjerge, K., Nielsen, J. B., Sepstrup, M. V., Helsing-Nielsen, F. & Høye, T. T. (2021). An automated light trap to monitor moths (Lepidoptera) using computer vision-based tracking and deep learning. Sensors (Switzerland), 21(2), Article 343. https://doi.org/10.3390/s21020343

Rahman, M. S., Hossain, M. S., Saha, S. K., Rahman, S., Sonne, C. & Kim, K.-H. (2021). Homology Modeling and Probable Active Site Cavity Prediction of Uncharacterized Arsenate Reductase in Bacterial spp. Applied Biochemistry and Biotechnology, 193(1), 1-18. https://doi.org/10.1007/s12010-020-03392-w