Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Lorentzen, M. C. L., Bredesen, K., Smit, F. W. H., Hansen, T. H., Nielsen, L. & Mosegaard, K. (2022). Mapping Cretaceous faults using a convolutional neural network – A field example from the Danish North Sea. Bulletin of the Geological Society of Denmark, 71, 31-50. https://doi.org/10.37570/bgsd-2022-71-03

Guimaraes, A., Borin, E. & Aranha, D. F. (2022). MOSFHET: Optimized Software for FHE over the Torus. Abstract from 5th Homomorphic Encryption Standards Meeting, Geneva, Switzerland.

Mortensen, J., Rysgaard, S., Winding, M. H. S., Juul-Pedersen, T., Arendt, K. E., Lund, H., Stuart-Lee, A. E. & Meire, L. (2022). Multidecadal Water Mass Dynamics on the West Greenland Shelf. Journal of Geophysical Research: Oceans, 127(7), Article e2022JC018724. https://doi.org/10.1029/2022JC018724

Hansen, K. E., Lorenzen, J., Davies, J., Wacker, L., Pearce, C. & Seidenkrantz, M. S. (2022). Deglacial to Mid Holocene environmental conditions on the northeastern Greenland shelf, western Fram Strait. Quaternary Science Reviews, 293, Article 107704. https://doi.org/10.1016/j.quascirev.2022.107704

Fjelstrup, S., Dupont, D. M., Bus, C., Enghild, J. J., Jensen, J. B., Birkenkamp-Demtröder, K., Dyrskjøt, L. & Kjems, J. (2022). Differential RNA aptamer affinity profiling on plasma as a potential diagnostic tool for bladder cancer. NAR cancer, 4(3), Article zcac025. https://doi.org/10.1093/narcan/zcac025

Montasell, M. C., Monge, P., Carmali, S., Dias Loiola, L. M., Andersen, D. G., Løvschall, K. B., Søgaard, A. B., Kristensen, M. M., Pütz, J. M. & Zelikin, A. N. (2022). Chemical zymogens for the protein cysteinome. Nature Communications, 13(1), Article 4861. https://doi.org/10.1038/s41467-022-32609-1

Butuzova, E. A., Kurbanov, R. N., Taratunina, N. A., Makeev, A. O., Rusakov, A. V., Lebedeva, M. P., Murray, A. S. & Yanina, T. A. (2022). Shedding light on the timing of the largest Late Quaternary transgression of the Caspian Sea. Quaternary Geochronology, 73, Article 101378. https://doi.org/10.1016/j.quageo.2022.101378

Nielsen, K. H. (2022). Gaia overvinder alt. Weekendavisen, Sektion 4 (Ideer), 5.

Nielsen, K. H. (2022). O for original. Weekendavisen, Sektion 4 (Ideer), 5.

Greve, A. N., Jepsen, J. R. M., Mortensen, E. L., Uher, R., Mackenzie, L., Foldager, L., Gantriis, D., Burton, B. K., Ellersgaard, D., Christiani, C. J., Spang, K. S., Hemager, N., Uddin, J., Henriksen, M. T., Zahle, K. K., Stadsgaard, H., Plessen, K. J., Thorup, A. A. E., Nordentoft, M. ... Bliksted, V. (2022). Transmission of intelligence, working memory, and processing speed from parents to their seven-year-old offspring is function specific in families with schizophrenia or bipolar disorder. Schizophrenia Research, 246, 195-201. https://doi.org/10.1016/j.schres.2022.06.032

Trant, P. L. K. (2022). Soil geochemistry. In Northern Emporium (pp. 301-314). Aarhus Universitetsforlag.

Larsen, N. Y., Vihrs, N., Møller, J., Sporring, J., Tan, X., Li, X., Ji, G., Rajkowska, G., Sun, F. & Nyengaard, J. R. (2022). Layer III pyramidal cells in the prefrontal cortex reveal morphological changes in subjects with depression, schizophrenia, and suicide. Translational Psychiatry, 12(1), Article 363. https://doi.org/10.1038/s41398-022-02128-0

Uhl, D., Wituschek, A., Michiels, R., Trinter, F., Jahnke, T., Allaria, E., Callegari, C., Danailov, M., Di Fraia, M., Plekan, O., Bangert, U., Dulitz, K., Landmesser, F., Michelbach, M., Simoncig, A., Manfredda, M., Spampinati, S., Penco, G., Squibb, R. J. ... Bruder, L. (2022). Extreme Ultraviolet Wave Packet Interferometry of the Autoionizing HeNe Dimer. The Journal of Physical Chemistry Letters, 13(36), 8470-8476. https://doi.org/10.1021/acs.jpclett.2c01619

Du, J., Niu, Y., Wu, H., Konnerup, D., Wu, S., Ramírez-Vargas, C. A., Yang, Y., Brix, H. & Arias, C. A. (2022). Effects of electroconductive materials on treatment performance and microbial community structure in biofilter systems with silicone tubings. Chemosphere, 307(2), Article 135828. https://doi.org/10.1016/j.chemosphere.2022.135828

Kubiak, K., Wien, F., Yadav, I., Jones, N. C., Hoffmann, S. V., Le Cam, E., Cossa, A., Geinguenaud, F., van der Maarel, J. R. C., Węgrzyn, G. & Arluison, V. (2022). Amyloid-like Hfq interaction with single stranded DNA: involvement in recombination and replication in Escherichia coli. QRB Discovery, 3, Article e15. https://doi.org/10.1017/qrd.2022.15

Nielsen, K. H. & Andersen, C. (2022). Small-State Science Policy and Politics: Shaping Denmark, Science, and Technology in the 20th Century. Abstract from 10th Conference of the European Society for the History of Science, Brussels, Denmark. https://eshsbrussels2022.com/overview/book-of-abstracts/

De Chiara, G. & Imparato, A. (2022). Quantum fluctuation theorem for dissipative processes. Physical Review Research , 4(2), Article 023230. https://doi.org/10.1103/PhysRevResearch.4.023230

Ordonez, A. & Riede, F. (2022). Changes in limiting factors for forager population dynamics in Europe across the last glacial-interglacial transition. Nature Communications, 13(1), Article 5140. https://doi.org/10.1038/s41467-022-32750-x

Bøjesen, E. D. (2022). Going beyond ensemble average angular cross-correlation analysis. IUCrJ, 9(4), 401-402. https://doi.org/10.1107/S205225252200656X

Nørnberg, P., Thøgersen, J., Bak, E. N., Finster, K., Jakobsen, H. J. & Jensen, S. K. (2019). Saltation may be contributory in the depletion of methane on Mars. EGU General Assembly (EGU2019), Proceedings, 21(13986), 201.

Stevens, R. L., Duque, C., Karim, A., Lashkaryee, A. H. & Zareef, L. (2021). Remote assessment of sustainable groundwater resources using karezes (qanats), north of Kandahar, Afghanistan. In O. Trofymchuk & B. Rivza (Eds.), 21st International Multidisciplinary Scientific GeoConference SGEM 2021 (pp. 133-141). STEF92 Technology. https://doi.org/10.5593/sgem2021V/3.2/s12.21

Limaye, N., Srinivasan, S. & Tavenas, S. (2022). Superpolynomial Lower Bounds Against Low-Depth Algebraic Circuits. In Proceedings - 2021 IEEE 62nd Annual Symposium on Foundations of Computer Science, FOCS 2021 (pp. 804-814). IEEE Computer Society Press. https://doi.org/10.1109/FOCS52979.2021.00083

Bhattacharya, S., Amarsaikhan, N., Maupin, A. J., Schlosser, A., Fuchtbauer, E. M., Holmskov, U., Moeller, J. B. & Templeton, S. P. (2021). FIBCD1 Deficiency Decreases Disease Severity in a Murine Model of Invasive Pulmonary Aspergillosis. ImmunoHorizons, 5(12), 983-993. https://doi.org/10.4049/immunohorizons.2100092

Smith, P. H., Tamppari, L. K., Arvidson, R. E., Bass, D., Blaney, D., Boynton, W. V., Carswell, A., Catling, D. C., Clark, B. C., Duck, T., Dejong, E., Fisher, D., Goetz, W., Gunnlaugsson, H. P., Hecht, M. H., Hipkin, V., Hoffman, J., Hviid, S. F., Keller, H. U. ... Zent, A. P. (2009). H₂O at the Phoenix landing site. Science (New York, N.Y.), 325(5936), 58-61. https://doi.org/10.1126/science.1172339

Stevnsner, T. & Sanchez-Roman, I. (2022). Molecular markers associated with cognitive impairment in centenarians. Aging, 14(10), 4191-4192. https://doi.org/10.18632/aging.204094

Sha, L., Knudsen, K. L., Eiríksson, J., Björck, S., Jiang, H., Yang, X., Yu, X. & Li, D. (2022). Diatom-reconstructed summer sea-surface temperatures and climatic events off North Iceland during the last deglaciation and Holocene. Palaeogeography, Palaeoclimatology, Palaeoecology, 602, Article 111154. https://doi.org/10.1016/j.palaeo.2022.111154

Brøcker, K., Drożdżowicz, A. & Schindler, S. (2020). Introduction. In Linguistic Intuitions: Evidence and Method (pp. 1-9). Oxford University Press. https://doi.org/10.1093/oso/9780198840558.003.0001

Duque, C., Meyer, R. & Sonnenborg, T. O. (2022). Intrusión de agua salada en Dinamarca. Boletín Geológico y Minero, 133(1), 29-46. https://doi.org/10.21701/bolgeomin/133.1/002

Urbanič, G., Politti, E., Rodríguez-González, P. M., Payne, R., Schook, D., Alves, M. H., Anđelković, A., Bruno, D., Chilikova-Lubomirova, M., Di Lonardo, S., Egozi, R., Garófano-Gómez, V., Gomes Marques, I., González del Tánago, M., Gültekin, Y. S., Gumiero, B., Hellsten, S., Hinkov, G., Jakubínský, J. ... Dufour, S. (2022). Riparian Zones—From Policy Neglected to Policy Integrated. Frontiers in Environmental Science, 10, Article 868527. https://doi.org/10.3389/fenvs.2022.868527

Vosegaard, E. S., Thomsen, M. K., Krause, L., Gronbech, T. B. E., Mamakhel, A., Takahashi, S., Nishibori, E. & Iversen, B. B. (2022). Synchrotron X-ray Electron Density Analysis of Chemical Bonding in the Graphitic Carbon Nitride Precursor Melamine. Chemistry - A European Journal, 28(54), Article e202201295. https://doi.org/10.1002/chem.202201295

Khan, N., Aslan, H., Büttner, H., Rohde, H., Golbek, T. W., Roeters, S. J., Woutersen, S., Weidner, T. & Meyer, R. L. (2022). The giant staphylococcal protein Embp facilitates colonization of surfaces through Velcro-like attachment to fibrillated fibronectin. eLife, 11, Article e76164. https://doi.org/10.7554/elife.76164

Ørsted, M., Yashiro, E., Hoffmann, A. A. & Kristensen, T. N. (2022). Population bottlenecks constrain host microbiome diversity and genetic variation impeding fitness. PLoS Genetics, 18(5), Article e1010206. https://doi.org/10.1371/journal.pgen.1010206

Bataillon, T., Ezard, T. H. G., Kopp, M. & Masel, J. (2022). Genetics of adaptation and fitness landscapes: From toy models to testable quantitative predictions. Evolution, 76(6), 1104-1107. https://doi.org/10.1111/evo.14477

Rakotonirina, I., Ambrona, M., Aguirre, A. & Barthe, G. (2022). Symbolic Synthesis of Indifferentiability Attacks. In ASIA CCS 2022 - Proceedings of the 2022 ACM Asia Conference on Computer and Communications Security (pp. 667-681). Association for Computing Machinery. https://doi.org/10.1145/3488932.3497759

Al Farid, F., Hashim, N., Abdullah, J., Bhuiyan, M. R., Shahida Mohd Isa, W. N., Uddin, J., Haque, M. A. & Husen, M. N. (2022). A Structured and Methodological Review on Vision-Based Hand Gesture Recognition System. Journal of Imaging, 8(6), Article 153. https://doi.org/10.3390/jimaging8060153

Thomas, S. P., Dikundwar, A. G., Sarkar, S., Pavan, M. S., Pal, R., Hathwar, V. R. & Row, T. N. G. (2022). The Relevance of Experimental Charge Density Analysis in Unraveling Noncovalent Interactions in Molecular Crystals. Molecules, 27(12), Article 3690. https://doi.org/10.3390/molecules27123690

Ashall, C., Lu, J., Shappee, B. J., Burns, C. R., Hsiao, E. Y., Kumar, S., Morrell, N., Phillips, M. M., Shahbandeh, M., Baron, E., Boutsia, K., Brown, P. J., DerKacy, J. M., Galbany, L., Hoeflich, P., Krisciunas, K., Mazzali, P., Piro, A. L., Stritzinger, M. D. & Suntzeff, N. B. (2022). A Speed Bump: SN 2021aefx Shows that Doppler Shift Alone Can Explain Early Excess Blue Flux in Some Type Ia Supernovae. Astrophysical Journal Letters, 932(1), Article L2. https://doi.org/10.3847/2041-8213/ac7235

Jensen, M. L., Martinez Turtos, R., Julsgaard, B., Schulz, V., Balling, P. & Gundacker, S. (2022). A novel method for investigating optically stimulated luminescence in scintillators. Journal of Luminescence, 251, Article 119237. https://doi.org/10.1016/j.jlumin.2022.119237

Tesson, S. V. M. & Pröschold, T. (2022). Description of Limnomonas gen. nov., L. gaiensis sp. nov. and L. spitsbergensis sp. nov. (Chlamydomonadales, Chlorophyta). Diversity, 14(6), Article 481. https://doi.org/10.3390/d14060481

Ljungdahl, M. M. & Podolskij, M. (2022). Multidimensional parameter estimation of heavy-tailed moving averages. Scandinavian Journal of Statistics, 49(2), 593-624. https://doi.org/10.1111/sjos.12527

Zhou, Z., Man, X., Wang, S., Wang, X., Li, W., Chen, Y., Yuan, Z. & Guo, E. (2022). Temporal Partitioning of Fungal Sporophores in a Temperate Deciduous Broad-Leaved Forest. Diversity, 14(6), Article 483. https://doi.org/10.3390/d14060483

Wili, N., Nielsen, A. B., Völker, L. A., Schreder, L., Nielsen, N. C., Jeschke, G. & Tan, K. O. (2022). Designing broadband pulsed dynamic nuclear polarization sequences in static solids. Science Advances, 8(28), Article eabq0536. https://doi.org/10.1126/sciadv.abq0536

Misios, S., Logothetis, I., Knudsen, M. F., Karoff, C., Amiridis, V. & Tourpali, K. (2022). Decline in Etesian winds after large volcanic eruptions in the last millennium. Weather and Climate Dynamics, 3(3), 811-823. https://doi.org/10.5194/wcd-3-811-2022

Lu, H. P., Tian, H., Zhang, L. Y., Karoff, C., Chen, H. C., Shi, J. R., Hou, Z. Y., Chen, Y. J., Xu, Y., Wu, Y. C., Cao, D. T. & Wang, J. T. (2022). Possible detection of coronal mass ejections on late-type main-sequence stars in LAMOST medium-resolution spectra. Astronomy and Astrophysics, 663, Article A140. https://doi.org/10.1051/0004-6361/202142909

Euclid Collaboration (2022). Euclid preparation: I. the Euclid Wide Survey. Astronomy and Astrophysics, 662, Article A112. https://doi.org/10.1051/0004-6361/202141938

Laursen, R. & Hobolth, A. (2022). A Sampling Algorithm to Compute the Set of Feasible Solutions for NonNegative Matrix Factorization with an Arbitrary Rank. SIAM Journal on Matrix Analysis and Applications, 43(1), 257-273. https://doi.org/10.1137/20M1378971

Van Bergerem, S., Grohe, M. & Ritzert, M. (2022). On the Parameterized Complexity of Learning First-Order Logic. In PODS 2022 - Proceedings of the 41st ACM SIGMOD-SIGACT-SIGAI Symposium on Principles of Database Systems (pp. 337-346). Association for Computing Machinery. https://doi.org/10.1145/3517804.3524151

Cohen-Addad, V., Larsen, K. G., Saulpic, D. & Schwiegelshohn, C. (2022). Towards optimal lower bounds for k-median and k-means coresets. In S. Leonardi & A. Gupta (Eds.), STOC 2022 - Proceedings of the 54th Annual ACM SIGACT Symposium on Theory of Computing (pp. 1038-1051). Association for Computing Machinery. https://doi.org/10.1145/3519935.3519946

Ahmadi, A., Daliri, M., Goharshady, A. K. & Pavlogiannis, A. (2022). Efficient approximations for cache-conscious data placement. In R. Jhala & I. Dillig (Eds.), Proceedings of the 43rd ACM SIGPLAN International Conference on Programming Language Design and Implementation (pp. 857-871). Association for Computing Machinery. https://doi.org/10.1145/3519939.3523436

Sammler, M., Hammond, A., Lepigre, R., Campbell, B., Pichon-Pharabod, J., Dreyer, D., Garg, D. & Sewell, P. (2022). Islaris: verification of machine code against authoritative ISA semantics. In R. Jhala & I. Dillig (Eds.), PLDI 2022 - Proceedings of the 43rd ACM SIGPLAN International Conference on Programming Language Design and Implementation (pp. 825-840). Association for Computing Machinery. https://doi.org/10.1145/3519939.3523434

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