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Department of Biology

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The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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de Melo Costa, V. R., Pfeuffer, J., Louloupi, A., Ørom, U. A. V. & Piro, R. M. (2021). SPLICE-q: a Python tool for genome-wide quantification of splicing efficiency. BMC Bioinformatics, 22(1), Article 368. https://doi.org/10.1186/s12859-021-04282-6

Swann, A. F. (2021). Mayrand, Maxence. Stratified hyperkähler spaces from semisimple Lie algebras. Transform. Groups 25 (2020), no. 1, 191--215. MathSciNet, Article MR4070107.

Swann, A. F. (2021). Mayrand, Maxence. Erratum to: Stratified hyperkähler spaces from semisimple Lie algebras. Transform. Groups 25 (2020), no. 2, 645--646. MathSciNet, Article MR4098885.

Song, L., Roelsgaard, M., Blichfeld, A. B., Dippel, A.-C., Jensen, K. M. Ø., Zhang, J. & Iversen, B. B. (2021). Structural evolution in thermoelectric zinc antimonide thin films studied by in situ X-ray scattering techniques. IUCrJ, 8(Pt 3), 444-454. https://doi.org/10.1107/S2052252521002852

Hu, J., Liang, Z., Wang, H., Zhang, H., Huang, C., Xie, L., Li, Z., Jiang, Z., Huang, H. & Song, F. (2021). Symmetrical dehalogenation of 2, 7-dibromopyrene on Cu(1 1 1) with tunable intermediates and reaction paths. Applied Surface Science, 566, Article 150663. https://doi.org/10.1016/j.apsusc.2021.150663

Larsen, K. (2021). The porcine cerebellin gene family. Gene, 799, Article 145852. https://doi.org/10.1016/j.gene.2021.145852

Williams, C. J. A., Hansen, K., Williams, N., Jakobsen, S. R., Pedersen, C. C. E., Bertelsen, M. F. & Wang, T. (2021). The influence of assisted ventilation and recumbency on cardiorespiratory physiology in the anesthetized freshwater turtle Trachemys scripta scripta. Comparative Biochemistry and Physiology -Part A : Molecular and Integrative Physiology, 260, Article 111036. https://doi.org/10.1016/j.cbpa.2021.111036

Zarei, M., Rahimi, K., Hassanzadeh, K., Abdi, M., Hosseini, V., Fathi, A. & Kakaei, K. (2021). From the environment to the cells: An overview on pivotal factors which affect spreading and infection in COVID-19 pandemic. Environmental Research, 201, Article 111555. https://doi.org/10.1016/j.envres.2021.111555

Jessen, C. T., Foldager, L. & Riber, A. B. (2021). Effects of hatching on-farm on performance and welfare of organic broilers. Poultry Science, 100(9), Article 101292. https://doi.org/10.1016/j.psj.2021.101292

López-Quirós, A., Lobo, F. J., Duffy, M., Leventer, A., Evangelinos, D., Escutia, C. & Bohoyo, F. (2021). Late Quaternary high-resolution seismic stratigraphy and core-based paleoenvironmental reconstructions in Ona Basin, southwestern Scotia Sea (Antarctica). Marine Geology, 439, Article 106565. https://doi.org/10.1016/j.margeo.2021.106565

Christensen, R. S., Kløve, M., Roelsgaard, M., Sommer, S. & Iversen, B. B. (2021). Unravelling the complex formation mechanism of HfO₂ nanocrystals using in situ pair distribution function analysis. Nanoscale, 13(29), 12711-12719. https://doi.org/10.1039/D1NR03044B

Jørgensen, L. R., Borup, K., Zeuthen, C. M., Roelsgaard, M. & Iversen, B. B. (2021). Operando structural investigations of thermoelectric materials. Journal of Applied Crystallography, 54, 1189-1197. https://doi.org/10.1107/S1600576721006294

Brown, L. OD. (Ed.) (2021). The Mineral & Fossil Treasures of the Rice Museum. Diamond Dan Publications.

Timcenko, M., Dieudonné, T., Montigny, C., Boesen, T., Lyons, J. A., Lenoir, G. & Nissen, P. (2021). Structural Basis of Substrate-Independent Phosphorylation in a P4-ATPase Lipid Flippase. Journal of Molecular Biology, 433(16), Article 167062. https://doi.org/10.1016/j.jmb.2021.167062

Hansen, S. B., Dyla, M., Neumann, C., Quistgaard, E. M. H., Andersen, J. L., Kjaergaard, M. & Nissen, P. (2021). The Crystal Structure of the Ca²⁺-ATPase 1 from Listeria monocytogenes reveals a Pump Primed for Dephosphorylation. Journal of Molecular Biology, 433(16), Article 167015. https://doi.org/10.1016/j.jmb.2021.167015

Joyce, W. & Perry, S. F. (2021). Hif-1α is not required for the development of cardiac adrenergic control in zebrafish (Danio rerio). Journal of Experimental Zoology. Part A: Ecological and Integrative Physiology , 335(7), 623-631. https://doi.org/10.1002/jez.2507

Thomsen, K. (2021). Ground States for Generalized Gauge Actions on UHF Algebras. Communications in Mathematical Physics, 386(1), 57-85. https://doi.org/10.1007/s00220-021-04075-1

Dubey, V., Stokes, D. L., Pedersen, B. P. & Khandelia, H. (2021). An Intracellular Pathway Controlled by the N-terminus of the Pump Subunit Inhibits the Bacterial KdpFABC Ion Pump in High K⁺ Conditions. Journal of Molecular Biology, 433(15), Article 167008. https://doi.org/10.1016/j.jmb.2021.167008

Sweet, M. E., Larsen, C., Zhang, X., Schlame, M., Pedersen, B. P. & Stokes, D. L. (2021). Structural basis for potassium transport in prokaryotes by KdpFABC. Proceedings of the National Academy of Sciences (PNAS), 118(29), Article e2105195118. https://doi.org/10.1073/pnas.2105195118

Cao, B., Wang, Z., Xiong, X., Gao, L., Li, J. & Dong, M. (2021). Hysteresis-reversible MoS₂transistor. New Journal of Chemistry, 45(27), 12033-12040. https://doi.org/10.1039/d1nj01267c

Andersen, N. C. M., Fago, A. & Damsgaard, C. (2021). Evolution of hemoglobin function in tropical air-breathing catfishes. Journal of Experimental Zoology. Part A: Ecological and Integrative Physiology , 335(9-10), 814-819. https://doi.org/10.1002/jez.2504

Damsgaard, C., Lauridsen, H., Harter, T., Kwan, G., Thomsen, J., Funder, A., Supuran, C., Tresguerres, M., Matthews, P. & Brauner, C. (2021). Active Blood Acidification Greatly Enhances Oxygen Supply to the Teleost Retina. FASEB Journal, 35. https://doi.org/10.1096/fasebj.2021.35.S1.01833

Marzocchi, U., Thorup, C., Dam, A. S., Schramm, A. & Risgaard-Petersen, N. (2022). Dissimilatory nitrate reduction by a freshwater cable bacterium. ISME Journal, 16(1), 50-57. https://doi.org/10.1038/s41396-021-01048-z

Luo, Q., Zhang, L., Zhong, N., Wu, J., Goodarzi, F., Sanei, H., Skovsted, C. B., Suchý, V., Li, M., Ye, X., Cao, W., Liu, A., Min, X., Pan, Y., Yao, L. & Wu, J. (2021). Thermal evolution behavior of the organic matter and a ray of light on the origin of vitrinite-like maceral in the Mesoproterozoic and Lower Cambrian black shales: Insights from artificial maturation. International Journal of Coal Geology, 244, Article 103813. https://doi.org/10.1016/j.coal.2021.103813

Nadein, K., Kovalev, A., Thøgersen, J., Weidner, T. & Gorb, S. (2021). Insects use lubricants to minimize friction and wear in leg joints. Proceedings of the Royal Society B: Biological Sciences, 288(1954), Article 20211065. https://doi.org/10.1098/rspb.2021.1065

Naber, T. V., Grasby, S. E., Cuthbertson, J. P., Rayner, N. & Tegner, C. (2021). New Constraints on the Age, Geochemistry, and Environmental Impact of High Arctic Large Igneous Province Magmatism: Tracing the Extension of the Alpha Ridge onto Ellesmere Island, Canada. Geological Society of America Bulletin, 133(7-8), 1695-1711. https://doi.org/10.1130/B35792.1

Nissen, P. E., Silva-Cabrera, J. S. & Schuster, W. J. (2021). G 112-43/44: A metal-poor binary star with a unique chemical composition and Helmi stream kinematics. Astronomy and Astrophysics, 651(July), Article A57. https://doi.org/10.1051/0004-6361/202140826

Zhang, Y. C., Pohl, T. & Maucher, F. (2021). Phases of supersolids in confined dipolar Bose-Einstein condensates. Physical Review A, 104(1), Article 013310. https://doi.org/10.1103/PhysRevA.104.013310

Bundgaard, J., Loeschcke, V., Schou, M. F. & Bijlsma, K. (2021). Detecting purging of inbreeding depression by a slow rate of inbreeding for various traits: the impact of environmental and experimental conditions. Heredity, 127(1), 10-20. https://doi.org/10.1038/s41437-021-00436-7

Monge, P., Løvschall, K. B., Søgaard, A. B., Walther, R., Golbek, T. W., Schmüser, L., Weidner, T. & Zelikin, A. N. (2021). Synthetic Artificial Apoptosis-Inducing Receptor for On-Demand Deactivation of Engineered Cells. Advanced Science, 8(13), Article 2004432. https://doi.org/10.1002/advs.202004432

O’Regan, M., Cronin, T. M., Reilly, B., Alstrup, A. K. O., Gemery, L., Golub, A., Mayer, L. A., Morlighem, M., Moros, M., Munk, O. L., Nilsson, J., Pearce, C., Detlef, H., Stranne, C., Vermassen, F., West, G. & Jakobsson, M. (2021). The Holocene dynamics of Ryder Glacier and ice tongue in north Greenland. Cryosphere, 15(8), 4073-4097. https://doi.org/10.5194/tc-15-4073-2021

Hall, O. J., Davies, G. R., van Saders, J., Nielsen, M. B., Lund, M. N., Chaplin, W. J., García, R. A., Amard, L., Breimann, A. A., Khan, S., See, V. & Tayar, J. (2021). Weakened magnetic braking supported by asteroseismic rotation rates of Kepler dwarfs. Nature Astronomy, 5(7), 707-714. https://doi.org/10.1038/s41550-021-01335-x

López-Quirós, A., Escutia, C., Etourneau, J., Rodríguez-Tovar, F. J., Roignant, S., Lobo, F. J., Thompson, N., Bijl, P. K., Bohoyo, F., Salzmann, U., Evangelinos, D., Salabarnada, A., Hoem, F. S. & Sicre, M. A. (2021). Eocene-Oligocene paleoenvironmental changes in the South Orkney Microcontinent (Antarctica) linked to the opening of Powell Basin. Global and Planetary Change, 204, Article 103581. https://doi.org/10.1016/j.gloplacha.2021.103581

Heidari, A., Amini, N., Hansen, T. M., Amini, H. & Niri, M. E. (2021). Feasibility study of probabilistic seismic inversion to porosity for a carbonate reservoir. Iranian Journal of Geophysics, 15(1). https://doi.org/10.30499/IJG.2020.256860.1300

Abraham, A. J., Webster, A. B., Prys-Jones, T. O., le Roux, E., Smith, D., McFayden, D., de Jager, P. C., Clauss, M. & Doughty, C. E. (2021). Large predators can mitigate nutrient losses associated with off-site removal of animals from a wildlife reserve. Journal of Applied Ecology, 58(7), 1360-1369. https://doi.org/10.1111/1365-2664.13878

Scoma, A. (2021). Functional groups in microbial ecology: updated definitions of piezophiles as suggested by hydrostatic pressure dependence on temperature. ISME Journal, 15(7), 1871-1878. https://doi.org/10.1038/s41396-021-00930-0

Bayley, J. S., Overgaard, J. & Pedersen, T. H. (2021). Quantitative model analysis of the resting membrane potential in insect skeletal muscle: Implications for low temperature tolerance. Comparative Biochemistry and Physiology -Part A : Molecular and Integrative Physiology, 257, Article 110970. https://doi.org/10.1016/j.cbpa.2021.110970

Feng, R., Grana, D. & Balling, N. (2021). Imputation of missing well log data by random forest and its uncertainty analysis. Computers and Geosciences, 152, Article 104763. https://doi.org/10.1016/j.cageo.2021.104763

Ivanovs, J. & Thøstesen, J. D. (2021). Discretization of the Lamperti representation of a positive self-similar Markov process. Stochastic Processes and Their Applications, 137, 200-221. https://doi.org/10.1016/j.spa.2021.03.013

Rasmussen, B. B., Wang, K., Karstoft, J. G., Skov, S. N., Køcks, M., Andersen, C., Wierzbicka, A., Pagels, J., Pedersen, P. B., Glasius, M. & Bilde, M. (2021). Emissions of ultrafine particles from five types of candles during steady burn conditions. Indoor Air, 31(4), 1084-1094. https://doi.org/10.1111/ina.12800

Reginald, S. S., Etzerodt, M., Fapyane, D. & Chang, I. S. (2021). Functional Expression of a Mo-Cu-Dependent Carbon Monoxide Dehydrogenase (CODH) and Its Use as a Dissolved CO Bio-microsensor. ACS Sensors, 6(7), 2772–2782. https://doi.org/10.1021/acssensors.1c01243

Arias, C. A. (Ed.), Lara, J. N. (Ed.), Langergraber, G. (Ed.), Dotro, G. (Ed.), Nivala, J. (Ed.), Rizzo, A. (Ed.), Stein, O. R. (Ed.) & Ramirez-Vargas, C. A., (TRANS.) (2021). Tecnología de humedales para tratamiento: Información práctica para el diseño y aplicación de humedales para tratamiento. (1st ed.) IWA Publishing. https://doi.org/10.2166/9781789062342

Laustsen, J. S., Heck, R., Elíasson, O., Arlt, J. J., Sherson, J. & Weidner, C. A. (2021). Remote multi‑user control of the production of Bose–Einstein condensates. Applied Physics B: Lasers and Optics, 127(9), Article 125. https://doi.org/10.48550/arXiv.2101.11398, https://doi.org/10.1007/s00340-021-07671-0

Bressa, N. A., Korsgaard, H., Tabard, A., Houben, S. & Vermeulen, J. (2022). What's the Situation with Situated Visualization? A Survey and Perspectives on Situatedness. 107-117. https://doi.org/10.1109/TVCG.2021.3114835

Pacheco Esnal, J. P., Aznarez, C., Meerhoff, M., Liu, Y., Li, W., Baattrup-Pedersen, A., Cao, Y. & Jeppesen, E. (2021). Small-sized omnivorous fish induce stronger effects on food webs than warming and eutrophication in experimental shallow lakes. Science of the Total Environment, 797, Article 148998. https://doi.org/10.1016/j.scitotenv.2021.148998

Baumane, M., Zak, D. H., Riis, T., Kotowski, W., Hoffmann, C. C. & Baattrup-Pedersen, A. (2021). Danish wetlands remained poor with plant species 17-years after restoration. Science of the Total Environment, 798, Article 149146. https://doi.org/10.1016/j.scitotenv.2021.149146

Rocha, R. V. M., Libório, P. P., Kupwade Patil, H. & Aranha, D. F. (2021). A Differentially Private Hybrid Approach to Traffic Monitoring. In K. Sako & N. O. Tippenhauer (Eds.), Applied Cryptography and Network Security - ACNS 2021 (pp. 233-256). Springer. https://doi.org/10.1007/978-3-030-78375-4_10

Aranha, D. F., Pagnin, E. & Rodriguez-Henriquez, F. (2021). LOVE a Pairing. In P. Longa & C. Ràfols (Eds.), Progress in Cryptology – LATINCRYPT 2021 (pp. 320-340). Springer. https://doi.org/10.1007/978-3-030-88238-9_16

Aranha, D. F., Dalskov, A., Orlandi, C. & Escudero Ospina, D. E. (2021). Improved Threshold Signatures, Proactive Secret Sharing and Input Certification from LSS Isomorphisms. In P. Longa & C. Ràfols (Eds.), Progress in Cryptology – LATINCRYPT 2021 (pp. 382-404). Springer. https://doi.org/10.1007/978-3-030-88238-9_19

Larsen, M., Amorim Franchi, G., Herskin, M. S., Foldager, L., Larsen, M. L. V., Hernandez Castellano, L. E., Sørensen, M. T. & Jensen, M. B. (2021). Effects of feeding level, milking frequency, and single injection of cabergoline on feed intake, milk yield, milk leakage, and clinical udder characteristics during dry-off in dairy cows. Journal of Dairy Science, 104(10), 11108-11125. Article 20289. https://doi.org/10.3168/jds.2021-20289

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