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Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Madsen, I. (2007). Moduli Spaces from a Topological Viewpoint. In M. Sanz-Solé, J. Soria, J. L. Varona & J. Verdera (Eds.), Proceedings of the  International Congress of Mathematicians: Plenary lectures and ceremonies (pp. 385-411). European Mathematical Society.
Galatius, S., Madsen, I., Tillmann, U. & Weiss, M. (2006). The Homotopy Type of the Cobordism Category. arxiv.org. http://arxiv.org/abs/math/0605249
Asturizaga, A. S., Øllgaard, B. & Balslev, H. (2006). Frutos comestibles. In M. Moraes, B. Øllgaard, L. P. Kvist, F. Borchsenius & H. Balslev (Eds.), Botánica Económica de los Andes Centrales (pp. 329-346)
Penner, R. & Kaufmann, R. M. (2006). Closed/Open String Diagrammatics. Nuclear Physics, Section B, 748, 335-379.
de la Torre, L., Muriel, P. & Balslev, H. (2006). Etnobotánica en los Andes del Ecuador. In M. Moraes, B. Øllgaard, L. P. Kvist, F. Borchsenius & H. Balslev (Eds.), Botánica Económica de las Andes Centrales (pp. 246-267)
Balslev, H. (2006). Introducción. In M. Moraes, B. Øllgaard, L. P. Kvist, F. Borchsenius & H. Balslev (Eds.), Botánica Económica de los Andes Centrales
Penner, R. (2006). Probing Mapping Class Groups Using Arcs. In B. Farb (Ed.), Problems on Mapping Class Groups and Related Topics (Vol. 74, pp. 97-114). American Mathematical Society.
Agheli, H. & Sutherland, D. (2006). Nanofabrication of polymer surfaces utilizing colloidal lithography and ion etching. IEEE Transactions of Nanobioscience, 5(1), 9-14.
Campoccia, D., Montanaro, L., Agheli, H., Sutherland, D., Pirini, V., Giardino, R. & Arciola, C. R. (2006). Bacteria study of staphylococcus aureus adhesion on a novel nanostructured surface. International Journal of Artificial Organs, 29(6), 622-629.
Dalby, M. J., McCloy, D., Robertson, M., Agheli, H., Sutherland, D., Affrossman, S. & Oreffo, R. O. C. (2006). Osteoprogenitor response to semi-ordered and random nanotopographies. Biomaterials, 27(15), 2980-2987.
Penner, R. (2006). Surfaces, Circles, and Solenoids. In A. Papadopoulos (Ed.), Handbook of Teichmüller Theory (Vol. 1). European Math. Society Series.
Giavaresi, G., Tschon, M., Dalby, J. H., Liggat, J. J., Sutherland, D., Agheli, H., Fini, M., Torricelli, P. & Giardino, R. (2006). In vitro and in vivo response to nanotopographically modified surfaces of poly(3-hydroxybutyrate-co-3-hydroxyvalerate) and polycaprolactone. Journal of Biomaterials Science. Polymer Edition, 17(12), 1405-23.
Christensen, S. (2002). A synthetic groundwater modelling study of the accuracy of GLUE uncertainty intervals. Abstract from  27th General Assembly of EGS in Nice, France.
Lovschall, H., Tummers, M., Thesleff, I., Füchtbauer, E.-M. & Poulsen, K. (2005). Activation of the Notch signaling pathway in response to pulp capping of rat molars. European Journal of Oral Sciences, 113(4), 312-317.
Christensen, S., Cooley, R. L., Kovar (red.), K. & Hrkal (red.), Z. (2002). Experiences from the testing of a theory for modelling groundwater flow in heterogeneous media. Paper presented at 4th Int. Conf. on Calibration and Reliability in Groundwater Modelling, Model CARE, Charles University, Prague.
Penner, R. (2006). Lambda Lengths. Department of Mathematical Sciences, Aarhus University. http://www.ctqm.au.dk/research/MCS/lambdalengths.pdf
Seidenkrantz, M.-S., Kuijpers, A., Aagaard-Sørensen, S., Andersson, S., Christiansen, S., Ebbesen, H., Fischel, A., Heinemeier, J., Jiang, H., Knutz, P., Lindgren, H., Lloyd, J., Moros, M., Møller, H. S., Ploug, J., Poulsen, N., Przybylo, P., Snowball, I. & Stabell, B. (2007). The Davis Strait Arctic Gateway: Ocean Circulation and West Greenland Climate since the Last Glacial Maximum (DASAG). Abstract from Forams2006 - International Symposium on Foraminifera, Natal, Brazil.
Weyer, G., Gunnlaugsson, H. P., Bharuth-Ram, K., Dietrich, M., Mantovan, R., Naicker, V., Naido, D. & Sielemann, R. (2005). Acceleration of diffusional jumps of interstitial Fe with increasing Ge concentration in Si1-xGex alloys observed by Mössbauer spectroscopy. Hyp. Int., 158, 417-421.
Lundgaard, K. L., Tegner, C., Cawthorn, R. G., Kruger, F. J. & Wilson, J. R. (2006). Trapped intercumulus liquid in the Main Zone of the eastern Bushveld Complex, South Africa. Contributions to Mineralogy and Petrology, 151, 352-369.
Overgaard, J., Sørensen, J. G., Petersen, S. O., Loeschcke, V. & Holmstrup, M. (2006). Reorganization  of membrane lipids during fast and slow cold hardening in Drosophila melanogaster. Physiological Entomology, 31, 328-335.
Lauritsen, J. V., Vang, R. T. & Besenbacher, F. (2006). Applications of Atom-resolved Scanning Tunneling Microscopy in Catalysis Research. In B. Bhusan & H. Fuchs (Eds.), Applied Scanning Probe Methods VII: Biomimetics and Industrial Applications (Vol. 7, pp. 197-221). Springer.
Lindholm Nielsen, M., Lister, R., Adams, E. S., Fitzgerald, S., Fone, W., Hamer, J., McCartney, R., Moström, J. E., Sanders, K., Seppälä, O., Simon, B. & Thomas, L. (2004). A multi-national study of reading and tracing skills in novice programmers. SIGCSE Bulletin Inroads, 36(4), 119-150.
Heckmann, A. B., Hebelstrup, K. H., Larsen, K., Micaelo, N. M. & Jensen, E. Ø. (2006). A single hemoglobin gene in Myrica gale retains both symbiotic and non-symbiotic specificity. Plant Mol. Biol., 61(4-5), 769-779.
Hebelstrup, K. H., Hunt, P., Dennis, E., Jensen, S. B. & Jensen, E. Ø. (2006). Hemoglobin is essential for normal growth of Arabidopsis organs. Physiol. Plant., 127(1), 157-166.
Ebbesen, M. (2006). Brug af nanoteknologi inden for fødevareforskning. In S. Brock, A. Moe Rasmussen & B. B. Hansen (Eds.), Tankeføde - om mad, måltider og fødevarer i sammenhæng (pp. 119-135). Forlaget Philosophia.
Lund, M. B., Fritz, M., Holmstrup, M. & Schramm, A. (2006). Co-Speciation of Earthworms and their nephridial symbionts, Acidovorax Spp. In The Hidden Powers - Microbial Communities in Action.Proceedings of the 11th International Symposium on Microbial Ecology (ISME-11). Vienna, Austria (pp. 182). International Society for Microbial Ecology.
Herrmann, M. & Schramm, A. (2006). Do freshwater macrophytes influence the community structure of ammonia-oxidizing and denitrifying bacteria in the rhizosphere? In The Hidden Powers - Microbial Communities in Action. Proceedings of the 11th International Symposium on Microbial Ecology (ISME-11) (pp. 349). International Society for Microbial Ecology.
Nielsen, L. P. (2005). Impact of Bacterial NO3- Transport on Sediment Biogeochemistry. Applied and Environmental Microbiology, 7575-7577.
Mailund, T., Pedersen, C. N. S., Bardino, J., Vinter, B. & Karlsen, H. (2007). Experiences with GeneRecon on MiG. Future Generation Computer Systems - The International Journal of eScience, 23, 580-586. https://doi.org/10.1016/j.future.2006.09.003
Bang, A., Grønkjær, P., Clemmesen, C. & Høie, H. (2006). Parental effects on early life history traits of Atlantic herring (Clupea harengus L.) larvae. Journal of Experimental Marine Biology and Ecology, 334, 51-63.
Krüger, A., Birkedal, V., Raarup, M. K., Kristensen, M., Kjems, J. & Besenbacher, F. (2006). Single-molecule Microscopy on Nucleic Acids. Poster session presented at NANOBIO Summer School "The live cell from nano to micro", Cargese, Corse, France.
Asakawa, K., Watanabe, Y., Ozaki, N., Mizutani, M., Takata, Y., Kitagawa, Y., Ikeda, N., Sugimoto, Y., Wang, X., Ohkouchi, S., Nakamura, S., Watanabe, A., Kristensen, M., Sigmund, O., Borel, P. I. & Baets, R. (2006). Photonic crystals and quantum dots: towards integrated optics for advanced ultra-fast all-optical signal processing. Paper presented at ECOC'06, Cannes, France.
Sugimoto, Y., Watanabe, Y., Ikeda, N., Ozaki, N., Mizutani, M., Takata, Y., Asakawa, K., Ishikawa, H., Jensen, J. S., Sigmund, O., Borel, P. I. & Kristensen, M. (2006). Topology optimization for photonic crystal waveguide intersection with wide and flat bandwidths in ultra-fast all-optical switch (PC-SMZ). Paper presented at ECOC'06, Cannes, France.

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Astarita, G., Rourke, B. C., Andersen, J. B., Fu, J., Kim, J. H., Bennett, A. F., Hicks, J. W. & Piomelli, D. (2006). Postprandial increase of oleoylethanolamide mobilization in small intestine of the Burmese python (Python molurus). American Journal of Physiology: Regulatory, Integrative and Comparative Physiology, 290, R1407-R1412. https://doi.org/10.1152/ajpregu.00664.2005
Levinsky, I., Skov, F., Svenning, J.-C. & Rahbek, C. (2006). Potential impacts of climate change on the distributions and diversity patterns of European mammals. Poster session presented at Student Conference on Conservation Science, University of Cambridge, Cambridge, UK.
Abildgaard, L., Engberg, R. M., Schramm, A. & Højberg, O. (2006). Quantitative Detection of Clostridium perfringens in Broiler Chickens by Real-Time PCR Targeting the Alpha-Toxin Gene. In The Hidden Powers - Microbial Communities in Action. Proceedings of the 11th International Symposium on Microbial Ecology (ISME-11) (pp. 441). International Society for Microbial Ecology.
Madsen, P. T., Johnson, M., Miller, P. J. O., Aguilar Soto, N., Lynch, J. & Tyack, P. (2006). Quantitative measures of air-gun pulses recorded on sperm whales (Physeter macrocephalus) using acoustic tags during controlled exposure experiments. Acoustical Society of America. Journal, 120(4), 2366-2379.
Svenning, J.-C. & Skov, F. (2006). Range filling in European trees. Journal of Biogeography, 33, 2013-2021.
Brix, H., Koottatep, T. & Laugesen, C. H. (2006). Re-establishment of wastewater treatment in tsunami affected areas of Thailand by the use of constructed wetlands. In 10th International Conference on Wetland Systems for Water Pollution Control,  September 23-29, Lisbon, Portugal (pp. 59-67)
Seigneux, S. D., Malte, H., Dimke, H. A., Frøkiær, J., Nielsen, S. & Frische, S. (2006). Renal compensation to chronic hypoxic hypercapnia; downregulation of pendrin and adaptation of the proximal tubule. Poster session presented at Renal compensation to chronic hypoxic hypercapnia; downregulation of pendrin and adaptation of the proximal tubule.
Overgaard, J., Sørensen, J. G., Petersen, S. O., Loeschcke, V. & Holmstrup, M. (2006). Reorganization  of membrane lipids during fast and slow cold hardening in Drosophila melanogaster. Physiological Entomology, 31, 328-335.
Bascompte, J., Jordano, P. & Olesen, J. M. (2006). Response to Comment on "Asymmetric Coevolutionary Networks Facilitate Biodiversity Maintenance" Science (Technical Comment), 313(5795), 1887c.
Borchsenius, F. (2006). Scrophulariaceae and Orobanchaceae. In S. Frederiksen, F. N. Rasmussen & O. Seberg (Eds.), Dansk Flora (pp. 526-549). Gyldendal.
Abildgaard, L., Engberg, R., Pedersen, K., Schramm, A. & Højberg, O. (2006). Sequence variation among Alpha-toxin of Clostridium perfringens strains isolated from diseased and healthy chickens. In RRI-INRA Gut Microbiology 2006: Proceedings of the 5th Biennial Meeting Research to Improve Health, Immune Response and Nutrition
Nielsen, B. O. (2006). Spyfluer. Natur og Museum, 1, 1-35.
Nielsen, B. O. (2006). Stikmyggens liv. Natur og Miljø, 1, 10-13.
Juhler, S., Saunders, A. M., Pedersen, K., Revsbech, N. P., Schramm, A. & Nielsen, L. P. (2006). Stratification of Microbial Processes and Populations in Biofilms Treating Pig Farm Waste Air. In The Hidden Powers - Microbial Communities in Action. Proceedings of the 11th International Symposium on Microbial Ecology (ISME-11). Vienna, Austria (pp. 67). International Society for Microbial Ecology.
Lewinsohn, T., Jordano, P., Prado, P., Olesen, J. M. & Bascompte, J. (2006). Structure in plant-animal assemblages. Oikos, 113, 174-184.
Lewinsohn, T. M., Prado, P. I., Jordano, P., Bascompte, J. & Olesen, J. M. (2006). Structure in plant-animal interaction assemblages. Oikos, 113(1), 174-184.
Jensen, B., Nyengaard, J. R., Andersen, J. B., Pedersen, M. & Wang, T. (2006). Structure of the snake heart. Abstract from SVF PhD day, Aarhus, Denmark.
Mouritsen, K. N. (2006). The combined effect of climate and parasitism on communities of coastal invertebrates. In II International congress of parasitology, 6-11 August, 2006, Glasgow, Scotland. (Publiceret CD-rom)
Wang, T., Hung, C. C. Y. & Randall, D. J. (2006). The comparative physiology of food deprivation: From feast to famine. Annual Review of Physiology, 68, 223-251.
Olesen, J. M. (2006). The ecological consequences of complex topology and nested structure in pollination webs. In N. M. Waser & J. Ollerton (Eds.), Plant-pollinator interactions: From specialization to generalization (pp. 173-199). University of Chicago Press.
Jordano, P., Bascompte, J. & Olesen, J. M. (2006). The Ecological Consequences of Complex Topology and Nested Structure in Pollination Webs. In N. M. Waser & J. Ollerton (Eds.), Plant-Pollinator Interactions: From Specialization to Generalization (pp. 173-199). Chicago Univ. Press.
Bataillon, T., Mailund, T., Thorlacius, S., Steingrimsson, E., Rafnar, T., Halldorsson, M., Calian, V. & Schierup, M. H. (2006). The effective size of the Icelandic population and the prospects for LD mapping: inference from unphased microsatellite markers. European Journal of Human Genetics, 14, 1044–1053. https://doi.org/10.1038/sj.ejhg.5201669
Nielsen, U. N., Riis, T. & Brix, H. (2006). The effect of weed cutting on Luronium natans. Aquatic Conservation, 16, 409-417.
Bach, L. A., Helvik, T. & Christiansen, F. B. (2006). The evolution of n-player cooperation—threshold games and ESS bifurcations. Journal of Theoretical Biology, 238, 426-434.
Geuens, E., Tilleman, L., Hoogewijs, D., Kiger, L., Marden, M., Fago, A., Weber, R. E., Vanfleteren, J., Moens, L. & Dewilde, S. (2006). The globin family of C. elegans. In XIV International Conference on Dioxygen Binding and Sensing Proteins.- Stazione Zoologica Anton Dohrn, Naples. September 3-7, 2006. (pp. 69)
Bruhn, A., Lund-Hansen, L. C., Richardson, K., Morten Holtegaard, N. & Vang, T. (2006). The influence of turbulence on phytoplankton dynamics in the Little Belt, Denmark. Poster session presented at Challenger Conference for Marine Science, Liverpool, United Kingdom.
Dewilde, S., Ebner, B., Vinck, E., Gilany, K., Hankeln, T., Burmester, T., Kreiling, J., Reinisch, C., Vanfleteren, J. R., Kiger, L., Marden, M. C., Hundahl, C., Fago, A., Doorslaer, S. V. & Moens, L. (2006). The nerve hemoglobin of the bivalve mollusc Spisula solidissima. Journal of Biological Chemistry, 281(9), 5364-5372.
Barfod, A. S. (2006). The Palms of Thailand. Abstract from 6th EUNOPS meeting, Geneve, Switzerland.