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Department of Biology

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The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Hansen, J. H., Petersen, S. V., Andersen, K. K., Enghild, J. J., Damhus, T. & Otzen, D. (2009). Stable intermediates determine proteins' primary unfolding sites in the presence of surfactants. Biopolymers, 91(3), 221-31. https://doi.org/10.1002/bip.21125

Stec-Niemczyk, J., Pustelny, K., Kisielewska, M., Bista, M., Boulware, K., Stennicke, H., Thøgersen, I., Daugherty, P., Enghild, J., Popowicz, G., Dubin, A., Potempa, J. & Dubin, G. (2009). Structural and functional characterization of SplA, an exclusively specific protease of Staphylococcus aureus. Biochemical Journal. https://doi.org/10.1042/BJ20081351

Dam, S., Laursen, B. S., Ornfelt, J. H., Jochimsen, B., Stærfeldt, H. H., Friis, C., Nielsen, K., Goffard, N., Besenbacher, S., Krusell, L., Sato, S., Tabata, S., Thøgersen, I., Enghild, J. J. & Stougaard, J. (2009). The proteome of seed development in the model legume Lotus japonicus. Plant Physiology. https://doi.org/10.1104/pp.108.133405

Mikkelsen, P. E., Moltsen, A. S. A. & Sindbæk, S. M. (2008). Tæbring, NW Denmark, AD 600-1100: An archaeological and archaeobotanic study. Acta Archaeologica, 79, 79-109.

Madurga, M., Borge, M. J. G., Angelique, J. C., Bao, L., Bergmann, U., Butacheck, A., Cederkäll, J., Daugas, J. M., Diget, C. A., Fraile, L. M., Fynbo, H. O. U., Jeppesen, H., Jonson, B., Lienard, E., Marques, F., Meot, V., Negoita, F., Nilsson, T., Nyman, G. ... Rollander, K. W. (2008). Study of beta-delayed charged particle emission of 11Li: evidence of new decay channels. Journal of Physics: Conference Series, (012024). https://doi.org/10.1088/1742-6596/111/1/012024

Jensen, A. S., Rodriguez, R. A., Garrido, E., Fedorov, D. V. & Fynbo, H. O. U. (2008). Are sequential and direct decays distinguishable. Journal of Physics: Conference Series, (012035). https://doi.org/10.1088/1742-6596/111/1/012035

Prell, J. S., O'Brian, J. T., Holm, A. I. S., Leib, R. D., Donald, W. A. & Williams, E. R. (2008). Electron capture by a hydrated gaseous peptide: Effects of water on fragmentation and molecular survival. Journal of the American Chemical Society, 130(38), 12680-12689. https://doi.org/10.1021/ja8022434

O'Brian, J. T., Prell, J. S., Holm, A. I. S. & Williams, E. R. (2008). Effects of electron kinetic energy and ion-electron inelastic collisions in electron capture dissociation measured using ion nanocalorimetry. Journal of The American Society for Mass Spectrometry, 19(6), 772-779. https://doi.org/10.1016/j.jasms.2008.02.010

Donald, W. A., Leib, R. D., O'Brian, J. T., Holm, A. I. S. & Williams, E. R. (2008). Nanocalorimetry in mass spectrometry: A route to understanding ion and electron solvation. Proceedings of the National Academy of Sciences (PNAS), (47), 18102-18107. https://doi.org/10.1073/pnas.0801549105

Andersen, D. H., Pertoldi, C., Loeschcke, V., Cavicchi, S. & Scali, V. (2007). The impact of genetic parental distance on developmental stability and fitness in Drosophila buzzatii. Genetica, 134(2), 223-33. https://doi.org/10.1007/s10709-007-9229-3

Andersen, D. H., Pertoldi, C., Scali, V. & Loeschcke, V. (2005). Heat stress and age induced maternal effects on wing size and shape in parthenogenetic Drosophila mercatorum. Journal of Evolutionary Biology, 18(4), 884-92. https://doi.org/10.1111/j.1420-9101.2005.00955.x

Fournais, S., Hoffmann-Ostenhof, M. & Sørensen, T. Ø. (2008). Third derivative of the one-electron density at the nucleus. Annales Henri Poincare, 9(7), 1387-1412. https://doi.org/10.1007/s00023-008-0390-8

Fournais, S., Hoffmann-Ostenhof, M., Hoffmann-Ostenhof, T. & Sørensen, T. Ø. (2006). Regularity properties of molecular eigenfunctions and densities. Oberwolfach Reports, (4), 2822-2825.

Staanum, P., Højbjerre, K., Wester, R. & Drewsen, M. (2008). Probing isotope effects in chemical reactions using single ions. Europhysics Conference Abstracts, 139.

Fournais, S., Hoffmann-Ostenhof, M., Hoffmann-Ostenhof, T. & Sørensen, T. Ø. (2008). Local and global properties of eigenfunctions and one-electron densities of Coulombic Schrödinger operators. AIP Conference Proceedings, 70-84. https://doi.org/10.1063/1.2915642

Dantan, A., Herskind, P. F., Marler, J., Albert, M., Langkilde-Lauesen, M. B. & Drewsen, M. (2008). Cavity-QED with ion Coulomb crystals. Europhysics Conference Abstracts, 133.

Heilmann-Clausen, C., Abrahamsen, N., Larsen, M., Piasecki, S. & Stemmerik, L. (2008). Age of the youngest Paleogene flood basalts in East Greenland. Newsletters on Stratigraphy, 43(1), 55-63.

Janssen, A. W., Schnetler, K. I. & Heilmann-Clausen, C. (2008). Notes on the systematics, morphology and biostratigraphy of fossil holoplanktonic Mollusca, 19¹. Pteropods (Gastropoda, Euthecosomata) from the Eocene Lillebaelt Clay Formation (Denmark, Jylland). Basteria, 71, 157-168.

Kragh, H. (2008). Varmedød og kosmisk forfald: Et victoriansk undergangstema. Slagmark: tidsskrift for idéhistorie , (53), 31-44.

Rasmussen, E. S., Heilmann-Clausen, C., Waagstein, R. & Eidvin, T. (2008). The Tertiary of Norden. Episodes, 31(1), 66-72.

Wu, S., Yu, S. & Mølmer, K. (2009). Entropic uncertainty relation for mutually unbiased bases. Physical Review A, 79(022104). https://doi.org/10.1103/PhysRevA.79.022104

Andersen, J. E. & Berg, C. (2009). Quantum Hilbert matrices and orthogonal polynomials. Journal of Computational and Applied Mathematics, 233(3), 723-729. https://doi.org/10.1016/j.cam.2009.02.040

Svane, A. S. P., Sørensen, J., Schiøtt, H. B. & Nielsen, N. C. (2009). Glucagon - A model for amyloid fibril formation. Poster session presented at 7th Annual iNano Symposium, Århus, Denmark.

Sliwinska, K., Heilmann-Clausen, C., Dybkjær, K. & Clausen, O. R. (2009). Dinocyst stratigraphy and climatic signals in the Oligocene succession in the eastern North Sea Basin. G N S Science Miscellaneous Series, 78.

Sørensen, J., Hamelberg, D., Schiøtt, H. B. & McCammon, J. A. (2007). Using Molecular Dynamics to Investigate Properties of Fibrillating Proteins. Poster session presented at Novo Scholarship Symposium, Bagsværd, Denmark.

Sørensen, J., Hamelberg, D., Schiøtt, H. B. & McCammon, J. A. (2007). Using Molecular Dynamics to Investigate Properties of Transthyretin. Poster session presented at 5th Annual iNANO Symposium, Århus, Denmark.

Andresen, K. J., Clausen, O. R. & Huuse, M. (2007). A large-scale middle Miocene carbonate (?) mound structure in the Norwegian-Danish Basin: evidence for hydrocarbon migration?. Abstract from AGU 2007 Fall Meeting, San Francisco, United States.

Huuse, M., Andresen, K. J., Clausen, L., Seidler, L., Tirsgaard, H. & Schødt, N. (2008). Seismic imaging of past and present fluid flow from reservoir to surface offshore West Africa. Abstract from EGU General Assembly, Wien, Austria.

Andresen, K. J., Clausen, O. R. & Huuse, M. (2009). A giant (5.3 x 10⁷ m³) middle Miocene (c. 15 Ma) sediment mound (M1) above the Siri Canyon, Norwegian-Danish Basin: Origin and significance. Marine and Petroleum Geology, 26(8), 1640-1655. https://doi.org/10.1016/j.marpetgeo.2009.02.005

Koldsø, H. & Schiøtt, H. B. (2008). Serotonin Binding and Dynamics in the Human Serotonin Transporter. Poster session presented at SFB-Symposium 08, Vienna, Austria.

Jensen, P. D. & Bruhn, A. (2008). Den blå biomasse. Aktuel Naturvidenskab, 6, 12-14.

Kraft, J. F., Lie, M. A. & Schiøtt, H. B. (2009). Molecular Docking Simulations: Improvement of methodologies for membrane proteins. Poster session presented at iNANO autumn school 2007.

Koldsø, H., Celik, L., Sinning, S., Severinsen, K., Wiborg, O. & Schiøtt, H. B. (2008). Substrate Binding and Dynamics in the Human Serotonin Transporter. Poster session presented at ISQBP 2008, Ascona, Switzerland.

Iakovleva, A. I., Heilmann-Clausen, C., King, C., Shcherbinina, E. A., Steurbaut, E. & Stupin, S. I. (2009). Detailed Early Eocene dinocyst studies from eastern Peri-Tethys: new evidence for long-distance correlations and paleoceanographic reconstructions. Abstract from CBEP2009 Climatic and Biotic Events of the Paleogene, Wellington, New Zealand.

Kraft, J. F., Koldsø, H., Sinning, S., Severinsen, K., Wiborg, O. & Schiøtt, H. B. (2008). Binding of 1-Phenylpiperazine to the human Serotonin Transporter: A computational study. Poster session presented at ISQBP 2008.

Kraft, J. F., Koldsø, H., Sinning, S., Wiborg, O. & Schiøtt, H. B. (2008). Binding of 1-Phenylpiperazineto the human Serotonin Transporter: A computational study. Poster session presented at EMBO workshop, Paris, France.

Koldsø, H., Musgaard, M., Celik, L., Sinning, S., Severinsen, K., Hansen, C. G., Wiborg, O. & Schiøtt, H. B. (2007). Insights into Binding of Antidepressants to the Human Serotonin Transporter. Poster session presented at 5th iNANO Annual Meeting.

Koldsø, H., Celik, L. & Schiøtt, H. B. (2008). Homology Modelling of the Human Serotonin Transporter. Poster session presented at 6th iNANO Annual Meeting.

Kraft, J. F., Koldsø, H., Sinning, S., Severinsen, K., Wiborg, O. & Schiøtt, H. B. (2008). Binding of 1-Phenylpiperazineto the human Serotonin Transporter: A computational study. Poster session presented at iNANO autumn school 2008.

Koldsø, H., Musgaard, M., Celik, L., Sinning, S., Severinsen, K., Vinberg, K. A., Wiborg, O. & Schiøtt, H. B. (2007). Binding of Antidepressants and Psycostimulants in the Human Serotonin Transporter. Poster session presented at iNANO autumn school 2007.

Rasmussen, M. B., Jensen, P. D., Bruhn, A., Mouritsen, L. T., Olesen, B., Markager, S. S., Thomsen, A. B. & Sander, B. (2009). Aquatic biomass for biofuels. Poster session presented at ClimateCHANGE - global risks, Challenges and Decisions, København, Denmark. https://doi.org/10.1088/1755-1307/6/18/182010

Bruhn, A., Rasmussen, M. B., Jensen, P. D. & Olesen, B. (2009). Farming of aquatic biomass for energy : - growth potential of the marine seaweed Ulva lactuca. Poster session presented at 17th European Biomass Conference and Exhibition - from research to industries and markets, Hamborg, Germany.

Foldager, L., Steffensen, R. N., Thiel, S., Als, T. D., Kristensen, A. S., Straarup, S., Nielsen, H. J., Nordentoft, M., Mortensen, P. B., Rosenberg, R., Mors, O. & Jensenius, J. C. (2008). Schizophrenia and innate immune defense: association study of mannan-bindinglectin (MBL) and MBL-associated serine proteases-2 (MASP-2) deficiency. In WCPG 2008 Abstract Book (pp. 225)

Kragh, H. (2009). The second moon of the Earth. Journal for the History of Astronomy, 40(1), 1-10.

Foldager, L., Steffensen, R. N., Thiel, S., Als, T. D., Kristensen, A. S., Straarup, S., Nielsen, H. J., Nordentoft, M., Mortensen, P. B., Rosenberg, R., Mors, O. & Jensenius, J. C. (2009). Are defects in the innate immune defense contributing factors for mental disorders? In PhD Day 2009 Abstract Book (pp. 107)

Egger, J., Heilmann-Clausen, C. & Schmitz, B. (2009). From shelf to abyss: Record of the Paleocene/Eocene-boundary in the eastern Alps (Austria). Geologica Acta, 7(1-2), 215-227.

Iakovleva, A. I. & Heilmann-Clausen, C. (2006). Comparisons of Eocene dinoflagellate events across the North Sea Basin, Peri-Tethys and western Siberia: New evidences for long-distance correlations and provincialism. In Climate & Biota of the Early Paleogene 12^th- 20^th June Bilbao 2006. Volume of abstracts (pp. 70)

Ulriksen, H.-U., Thøgersen, J., Keiding, S. R., Perch Nielsen, I. R., Dam, J. S., Palima, D. Z., Stapelfeldt, H. & Gluckstad, J. (2008). Independent trapping, manipulation and characterization by an all-optical biophotonics workstation. Journal of the European Optical Society - Rapid Publications, 3(08034).

Shipovskov, S., Sutherland, D., Koroleva, O. V., Stephens, G. & Ferapontova, E. (2008). Characterisation of Laccases from Different Sources in the Systems of Reverse Micelles. Abstract from 7th Liquid Matter Conference, Lund, Sweden.

Jessen, C., Kuijpers, A., Seidenkrantz, M.-S., Nørgaard-Pedersen, N. & Prins, M. (2008). Late Holocene storminess in the Labrador Sea region: exotic pollen and aeolian dust as indicators of variability? Geophysical Research Abstracts.

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Anne Kirstine Mehlsen