Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Dare, E. & Kiderlen, M. (2024). Rotational Crofton formulae with a fixed subspace. Advances in Applied Mathematics, 153, Article 102611. https://doi.org/10.1016/j.aam.2023.102611

Dare, E. (2024). Stereologically adapted Crofton formulae for tensor valuations. Advances in Applied Mathematics, 160, Article 102754. https://doi.org/10.1016/j.aam.2024.102754

Laursen, K. R., Rasmussen, B. B., Rosati, B., Gutzke, V. H., Østergaard, K., Ravn, P., Kjærgaard, S., Glasius, M. & Sigsgaard, T. (2022). A randomized controlled trial of acute health effects from exposure to indoor ultrafine particles. Paper presented at 17th International Conference on Indoor Air Quality and Climate, INDOOR AIR 2022, Kuopio, Finland.

Pandit, S., Jacquemin, L., Zhang, J., Gao, Z., Nishina, Y., Meyer, R. L., Mijakovic, I., Bianco, A. & Pang, C. (2023). Polymyxin B complexation enhances the antimicrobial potential of graphene oxide. Frontiers in cellular and infection microbiology, 13, Article 1209563. https://doi.org/10.3389/fcimb.2023.1209563

Sahariah, P., Papi, F., Merz, K. L., Sigurjonsson, O. E., Meyer, R. L. & Nativi, C. (2024). Chitosan–saccharide conjugates for eradication of Pseudomonas aeruginosa biofilms. RSC Applied Polymers, 2(3), 461-472. https://doi.org/10.1039/D3LP00263B

Baudoin, F., Chen, L., Huang, C.-H., Ouyang, C., Tindel, S. & Wang, J. (2025). Weighted Besov spaces on Heisenberg groups and applications to the Parabolic Anderson model. ArXiv. https://doi.org/10.48550/arXiv.2501.04593

Zhang, H. R., Yang, Q., Wei, S., Yue, Y. & Yu, H. B. (2024). Impact of shadow glass transition on crystallization in metallic glass. National Science Open, 3(5), Article 20230064. https://doi.org/10.1360/nso/20230064

Pires, F., Tzeli, D., Jones, N. C., Hoffmann, S. V. & Raposo, M. (2025). Electronic States of Epigallocatechin-3-Gallate in Water and in 1,2-dipalmitoyl-sn-glycero-3-phospho-(1′-rac-glycerol) (Sodium Salt) Liposomes. International Journal of Molecular Sciences , 26(3), Article 1084. https://doi.org/10.3390/ijms26031084

Caragiannis, I. & Homrighausen, S. (2024). Estimating the Expected Social Welfare and Cost of Random Serial Dictatorship. In G. Schäfer & C. Ventre (Eds.), Algorithmic Game Theory - 17th International Symposium, SAGT 2024, Proceedings (pp. 184–201). Springer. https://doi.org/10.1007/978-3-031-71033-9_11

Mifsud, D. V., Góbi, S., Herczku, P., Sulik, B., Juhász, Z., Ioppolo, S., Mason, N. J. & Tarczay, G. (2024). Electron Irradiation of Crystalline Nitrous Oxide Ice at Low Temperatures: Applications to Outer Solar System Planetary Science.

Rocha, W. R. M., McClure, M. K., Sturm, J. A., Beck, T. L., Smith, Z. L., Dickinson, H., Sun, F., Egami, E., Boogert, A. C. A., Fraser, H. J., Dartois, E., Jimenez-Serra, I., Noble, J. A., Bergner, J., Caselli, P., Charnley, S. B., Chiar, J., Chu, L., Cooke, I. ... Linnartz, H. (2024). Ice inventory towards the protostar Ced 110 IRS4 observed with the James Webb Space Telescope. Results from the ERS Ice Age program.

Baattrup-Pedersen, A., Friis, K. B., Friberg, N. & Riis, T. (2025). Inter-linkages between in-stream plant diversity and macroinvertebrate communities. Hydrobiologia, 852(1), 235-247. https://doi.org/10.1007/s10750-024-05700-5

Andersen, D. K., Ejrnæs, R., Minter, M., Riis, T., Vinther, E. & Bruun, H. H. K. (2025). Environmental drivers of the decline of the fen orchid Liparis loeselii. Nordic Journal of Botany, 2025(1), Article e04419. https://doi.org/10.1111/njb.04419

Bringmann, K., Grønlund, A., Künnemann, M. & Larsen, K. G. (2024). The NFA Acceptance Hypothesis: Non-Combinatorial and Dynamic Lower Bounds. In V. Guruswami (Ed.), 15th Innovations in Theoretical Computer Science Conference (ITCS 2024) (pp. 22:1-22:25). Article 22 Dagstuhl Publishing. https://doi.org/10.4230/LIPIcs.ITCS.2024.22

Larsen, K. G. (2024). Bagging is an Optimal PAC Learner (Extended Abstract). In K. Larson (Ed.), Proceedings of the Thirty-Third International Joint Conference on Artificial Intelligence (IJCAI-24) (pp. 8411-8415). IJCAI Organization. https://doi.org/10.24963/ijcai.2024/932

Kalavasis, A., Karbasi, A., Larsen, K. G., Velegkas, G. & Zhou, F. (2024). Replicable Learning of Large-Margin Halfspaces. In Proceedings of the 41 st International Conference on Machine Learning (Vol. 235, pp. 22861-22878). MLResearch Press.

Hanneke, S., Larsen, K. G. & Zhivotovskiy, N. (2024). Revisiting Agnostic PAC Learning. In Proceedings - 2024 IEEE 65th Annual Symposium on Foundations of Computer Science, FOCS 2024 (pp. 1968-1982). IEEE. https://doi.org/10.1109/FOCS61266.2024.00118

Alon, N., Bousquet, O., Larsen, K. G., Moran, S. & Moran, S. (2024). Diagonalization Games. The American Mathematical Monthly, 131(10), 866-879. https://doi.org/10.1080/00029890.2024.2393992

Afshani, P., Killmann, R. & Larsen, K. G. (2024). Hierarchical categories in colored searching. Computational Geometry, 121, Article 102090. https://doi.org/10.1016/j.comgeo.2024.102090

da Cunha, A., Høgsgaard, M. M. & Larsen, K. G. (2024). Optimal Parallelization of Boosting. Abstract from NeurIPS'24: 38th Conference on Neural Information Processing Systems, Vancouver, Canada.

Zhivotovskiy, N., Larsen, K. G. & Montasser, O. (2024). Derandomizing Multi-Distribution Learning. Abstract from NeurIPS'24: 38th Conference on Neural Information Processing Systems, Vancouver, Canada.

Shah, A., Zhang, X., Snee, M., Lockhart-Cairns, M. P., Levy, C. W., Jowitt, T. A., Birchenough, H. L., Dean, L., Collins, R., Dodd, R. J., Roberts, A. R. E., Enghild, J. J., Mantovani, A., Fontana, J., Baldock, C., Inforzato, A., Richter, R. P. & Day, A. J. (2025). The structural organisation of pentraxin-3 and its interactions with heavy chains of inter-α-inhibitor regulate crosslinking of the hyaluronan matrix. Matrix biology : journal of the International Society for Matrix Biology, 136, 52-68. https://doi.org/10.1016/j.matbio.2025.01.002

Chorro, T. H. D., Kaussler, C., Kolodiazhnaia, J. V., Jensen, F., Skrydstrup, T. & Correia, C. R. D. (2025). Tandem synthesis of enantioenriched spirolactones via one-pot Heck-Matsuda reactions directly from nitroarenes. Organic Chemistry Frontiers , 12(4), 1257-1265. https://doi.org/10.1039/d4qo01979b

Yuan, H., Mitchell, C. W., Ferenbach, A. T., Bonati, M. T., Feresin, A., Benke, P. J., Tan, Q. K. G. & van Aalten, D. M. F. (2025). Exploiting O-GlcNAc dyshomeostasis to screen O-GlcNAc transferase intellectual disability variants. Stem Cell Reports, 20(1), 102380. Article 102380. https://doi.org/10.1016/j.stemcr.2024.11.010

Nan Cheng, Gupta, N., Mitrokotsa, A. & Tozawa, K. (2024). Constant-Round Private Decision Tree Evaluation for Secret Shared Data. Proceedings on Privacy Enhancing Technologies, 2024(1), 397-412. https://doi.org/10.56553/popets-2024-0023

Holm, H. & Jørgensen, P. (2024). A Brief Introduction to the Q-Shaped Derived Category. In P. A. Bergh, Ø. Solberg & S. Oppermann (Eds.), Triangulated Categories in Representation Theory and Beyond: The Abel Symposium 2022 (pp. 141-167). Springer. https://doi.org/10.1007/978-3-031-57789-5_5

Jensen, A. N. (2024). Dynamic Decomposition of Tropical Prevarieties for Celestial Mechanics. Lecture Notes in Computer Science, 313-321. https://doi.org/10.1007/978-3-031-64529-7_34

Caragiannis, I., Filos-Ratsikas, A., Nath, S. & Voudouris, A. (2024). Truthful ownership transfer with expert advice. Mathematical Programming, 203(1-2), 871-900. https://doi.org/10.1007/s10107-022-01834-3

Caragiannis, I. & Rathi, N. (2024). Optimizing Over Serial Dictatorships. Theory of Computing Systems, 68(5), 1180-1206. https://doi.org/10.1007/s00224-024-10196-6

Segelund, E. B., Kristensen, M. D., Holste, S., Lundby, J. M. B. & Pedersen, L. (2024). Inorganic phosphate transporter PiT2 and phosphate homeostasis. Poster session presented at 20th Annual Vienna BioCenter PhD Program Symposium , Vienna, Austria.

Caragiannis, I., Micha, E. & Peters, J. (2024). Can a Few Decide for Many? The Metric Distortion of Sortition. In R. Salakhutdinov, Z. Kolter & K. Heller (Eds.), Proceedings of the 41st International Conference on Machine Learning (ICML) (Vol. 235, pp. 5660-5679). Article 220 JMLR.org.

Caragiannis, I. & Kalantzis, G. (2024). Randomized learning-augmented auctions with revenue guarantees. In K. Larson (Ed.), Proceedings of the 33rd International Joint Conference on Artificial Intelligence (IJCAI) (pp. 2687-2694). International Joint Conferences on Artificial Intelligence.

Segelund, E. B., Kristensen, M. D., Holste, S., Lundby, J. M. B. & Pedersen, L. (2024). Inorganic phosphate transporter PiT2 and phosphate homeostasis. Abstract from 20th Annual Vienna BioCenter PhD Program Symposium , Vienna, Austria.

Birch, T., Horsnæs, H., Andreasen, R., Feveile, C., Merkel, S., Kershaw, J., Naismith, R. & Moesgaard, J. C. (2024). The Damhus Hoard: new insights into some of the earliest Viking silver coinage. 46-47. Abstract from Archaeometallurgy in Europe 2024, Falun, Sweden.

Andreasen, R., Birch, T., Jensen, R. B., Jensen, M. L., Taube, M. & Grane, T. (2024). Materialising Roman Diplomacy: a Pb isotope study of Eggers 92 bronze basins in Denmark – A link to Tiberius’s naval expedition to the North in 5 AD?. 88-88. Abstract from Archaeometallurgy in Europe 2024, Falun, Sweden.

Urhøj Møller, K., Andreasen, R. & Birch, T. (2024). A Novel Approach to Differentiate Icelandic Iron Production Slags from other Viking Sources Combining Sr Isotopes and Trace Elements. 235-236. Abstract from Archaeometallurgy in Europe 2024, Falun, Sweden.

Ali, S. D., Rasmussen, M. H., Catalano, J., Frederiksen, C. H. & Weidner, T. (2025). Bioinspired nanofilament coatings for scale reduction on steel. Beilstein Journal of Nanotechnology, 16, 25-34. https://doi.org/10.3762/BJNANO.16.3

Davies, L. R., Kristensen, T. N., Sørensen, J. G., Loeschcke, V. & Schou, M. F. (2025). Nutritional stress in larvae induces adaptive responses that transcend generations in males of a model insect. The Journal of experimental biology, 228(2), Article jeb247972. https://doi.org/10.1242/jeb.247972

McLachlan, P., Zamora Luria, J. C., Grombacher, D. & Christiansen, A. V. (2024). Assessing groundwater-surface water connectivity using land and waterborne TEM surveys. In 30th European Meeting of Environmental and Engineering Geophysics, Held at the Near Surface Geoscience Conference and Exhibition 2024, NSG 2024 European Association of Geoscientists and Engineers. https://doi.org/10.3997/2214-4609.202420155

Maurya, P., Auken, E., Christiansen, A. V., Grombacher, D. J., McLachlan, P. J., Harbo, A. L. C., Jensen, S. & Naundrup, J. J. (2024). A new semi-airborne loop source TEM system for 3D mapping of groundwater and mineral resources. In 4th Conference on Airborne, Drone and Robotic Geophysics European Association of Geoscientists and Engineers. https://doi.org/10.3997/2214-4609.202420105

Almpanis, A., Christiansen, A. V., McLachlan, P. & Grombacher, D. (2024). Comparing inductive and galvanic sources in semi-airborne transient electromagnetic (TEM) method: a parameter analysis. In 4th Conference on Airborne, Drone and Robotic Geophysics European Association of Geoscientists and Engineers. https://doi.org/10.3997/2214-4609.202420104

Zamora-Luria, J. C., Almpanis, A., Grombacher, D. & Christiansen, A. V. (2024). Unveiling environmental dynamics: on the use of time-lapse TEM for remediation assessment. In 30th European Meeting of Environmental and Engineering Geophysics, Held at the Near Surface Geoscience Conference and Exhibition 2024, NSG 2024 European Association of Geoscientists and Engineers, EAGE. https://doi.org/10.3997/2214-4609.202420168

Zhang, L., Bai, J., Shen, A., Zhao, J., Su, Z., Wang, M., Dong, M. & Xu, Z. P. (2025). Artificially tagging tumors with nano-aluminum adjuvant-tethered antigen mRNA recruits and activates antigen-specific cytotoxic T cells for enhanced cancer immunotherapy. Biomaterials, 317, Article 123085. https://doi.org/10.1016/j.biomaterials.2025.123085

Lusk, B. G., Morgan, S., Mulvaney, S. P., Blue, B., LaGasse, S. W., Cress, C. D., Bjerg, J. J., Lee, W. K., Eddie, B. J. & Robinson, J. T. (2025). Hydrated cable bacteria exhibit protonic conductivity over long distances. Proceedings of the National Academy of Sciences (PNAS), 122(4), Article e2416008122. https://doi.org/10.1073/pnas.2416008122

Tommasel, A. & Assent, I. (2024). Semantic grounding of LLMs using knowledge graphs for query reformulation in medical information retrieval. In W. Ding, C.-T. Lu, F. Wang, L. Di, K. Wu, J. Huan, R. Nambiar, J. Li, F. Ilievski, R. Baeza-Yates & X. Hu (Eds.), 2024 IEEE International Conference on Big Data (BigData) (pp. 4048-4057). IEEE. https://doi.org/10.1109/BigData62323.2024.10826117, https://doi.org/10.1109/BigData62323.2024.10826117

Tran, H. V., Zhang, Z., Pham, T. D., Doan, N. P., Hoang, A.-T., Li, P., Vandierendonck, H., Assent, I. & Mai, T. S. (2025). InteDisUX: intepretation-guided discriminative user-centric explanation for time series. Proceedings of the AAAI Conference on Artificial Intelligence, 39(20), 20921-20928. https://doi.org/10.1609/aaai.v39i20.35387

Beer, A., Palotás, O., Maldonado, A., Draganov, A. & Assent, I. (2024). DROPP: Structure-Aware PCA for Ordered Data: A General Method and its Applications in Climate Research and Molecular Dynamics. In 2024 IEEE 40th International Conference on Data Engineering (ICDE) (pp. 1143-1156). IEEE. https://doi.org/10.1109/ICDE60146.2024.00093

Borowski, M., Butcher, P. W. S., Kristensen, J. B., Petersen, J. O., Ritsos, P. D., Klokmose, C. N. & Elmqvist, N. (2025). DashSpace: A Live Collaborative Platform for Immersive and Ubiquitous Analytics. IEEE Transactions on Visualization and Computer Graphics, 31(10), 7034-7047. https://doi.org/10.1109/TVCG.2025.3537679

Hoffmann, S. V., Jones, N. C. & Rodger, A. (2025). Protein secondary structure determined from independent and integrated infra-red absorbance and circular dichroism data using the algorithm SELCON. QRB Discovery, 6, Article e10. https://doi.org/10.1017/qrd.2025.4

Wray, K. B. (2025). Is the Lack of Inter-referee Reliability a Threat to the Effectiveness of Peer Review in Science? Perspectives on Science, 33(2), 202-224. Article 10.1162/posc_a_00639. https://doi.org/10.1162/posc_a_00639

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