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Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Stevnsner, T., Nyaga, S., de Souza-Pinto, N. C., van der Horst, G. T. J., Gorgels, T. G. M. F., Hogue, B. A., Thorslund, T. & Bohr, V. (2002). Mitochondrial repair of 8-oxoguanine is deficient in Cockayne Syndrome group B. Oncogene, 21, 8675-8682.
Stevnsner, T., Thorslund, T., de Souza-Pinto, N. C. & Bohr, V. (2002). Mitochondrial repair of 8-oxoguanine and changes with aging. Experimental Gerontology, 37, 1189-1196.
Stougaard, J. (2001). Genetics and genomics of root symbiosis. Current Opinion in Plant Biology, 4, 328-336.
Stracke, S., Kistner, C., Yoshida, S., Mulder, L., Sato, S., Kaneko, T., Tabata, S., Sandal, N., Stougaard, J., Szczyglowski, K. & Parniske, M. (2002). A plant receptor-like kinase required for both bacterial and fungal symbiosis. Nature, 417, 959-962.
Sunesen, M., Selzer, R. R., Brosh, R. M. J., Balajee, A. S., Stevnsner, T. & Bohr, V. A. (2000). Molecular characterization of an acidic region deletion mutant of Cockayne syndrome group B protein. Nucl. Acids Res., 28, 3151-3159.
Sunesen, M., Stevnsner, T., Brosh Jr., R. M., Dianov, G. & Bohr, V. (2002). Global genome repair of 8-oxoG in hamster cells requires a functional CSB gene product. Oncogene, 21, 3571-3578.
Szymanski, M., Clark, B. F. C., Barciszewski, J., Barciszewski, J. (Ed.) & Clark, B. F. C. (Ed.) (1999). RNA biochemistry and biotechnology. In RNA on the Web (pp. 347-352). P: NATO ASI Series, Kluwer Academic Publishers.
Søe, R., Overgaard, M. T., Thomsen, A. R., Laursen, L. S., Olsen, I. M., Sottrup-Jensen, L., Haaning, J., Giudice, L. C., Conover, C. A. & Oxvig, C. (2002). Expression of recombinant murine pregnancy-associated plasma protein-A (PAPP-A) and a novel variant (PAPP-Ai) with differential proteolytic activity. European Journal of Biochemistry, 269, 2247-2256.
Søgaard, T. M. M., Jakobsen, C. G. & Justesen, J. (1999). A sensitive assay of translational fidelity (Readthrough and Termination) in eukaryotic cells. Biochemistry (Moscow), 64, 1408-1417.
Sørensen, B. K., Højrup, P., Østergaard, E., Jørgensen, C. S., Enghild, J., Ryder, L. R. & Houen, G. (2002). Silver staining of proteins on electroblotting membranes and intensification of silver staining of proteins separated by polyacrylamide gel electrophoresis. Anal. Biochem., 304, 33-41.
Sørensen, T. L., Clausen, J. D., Jensen, A. L., Vilsen, B., Møller, J. V., Andersen, J. P. & Nissen, P. (2004). Localization of a K+-binding site involved in dephosphorylation of the sarcoplasmic reticulum Ca2+-ATPase. Journal of Biological Chemistry, 279, 46355-46358.
Sørensen, T. L., Møller, J. V. & Nissen, P. (2004). Banebrydende molekylær studier af calciumpumpen.
Thomsen, L. K., Dunø, M., Westergaard, O. & Bendixen, C. (2000). Homomeric interaction of the mouse Rad52 protein. Mol. Biol. Rep., 27, 55-59.
Thøgersen, I., S.R., H., D.S., R., S.V., P., Z., V. & Enghild, J. J. (2002). New member of the trefoil factor family of proteins is an alpha-macroglobulin protease inhibitor. Biochim. Biophys. Acta., 1598(1-2), 131-139.
Tian, J. Y., Sørensen, E. S., Butler, W. T., Lopez, C. A., Sy, M. S., Desai, N. K. & Denhardt, D. T. (2000). Regulation of no synthesis induced by inflammatory mediators in RAW264.7 cells: collagen prevents inhibition by osteopontin. Cytokine, 12, 450-457.
Tolstrup, M., Østergaard, L., Laursen, A. L., Pedersen, F. S. & Duch, M. (2004). HIV/SIV escape from immune surveillance: Focus on nef. Current HIV Research, 2, 141-151.
Uckert, W., Becker, C., Gladow, M., Klein, D., Kammertoens, T., Pedersen, L. & Blankenstein, T. (2000). Efficient gene transfer into primary human CD8+ T Lymphocytes by MuLV-10A1 retrovirus pseudotype. Hum. Gene Ther., 11, 1005-1014.
Uckert, W., Pedersen, L., Günzburg, W., Walther, W. (Ed.) & Stein, U. (Ed.) (2000). Green fluorescent protein retroviral vector: Generation of high-titer producer cells and virus supernatant. In Methods in Molecular Medicine: Gene Therapy of Cancer: Methods and Protocols (35 ed., pp. 275-285). Humana Press Inc.
Ueda, H., Kristensen, P. & Winter, G. (2004). Stabilization of antibody fragment by protease selection. J. Mol. Cat., B: Enzymatic, 28, 173-179.
Ulrich-Vinther, M., Duch, M. R., Søballe, K., O'Keefe, R. J., Schwarz, E. M. & Pedersen, F. S. (2004). In vivo gene delivery to articular chondrocytes mediated by an adeno-associated virus vector. Journal of Orthopaedic Research, 22, 726-734.
Untidt, T., Glaser, S. J., Griesinger, C. & Nielsen, N. C. (1999). Unitary bounds; controllability of quantum evolution in NMR spectroscopy. Mol. Phys., 96, 1739-1744.
Untidt, T., Schulte-Herbrüggen, T., Sørensen, O. W. & Nielsen, N. C. (1999). Optimum α/β-HSQC pulse sequences for coherence-order-; spin-state-selective transfer in I2S spin systems. Journal of Physical Chemistry Part A: Molecules, Spectroscopy, Kinetics, Environment and General Theory, 103, 8921-8926.
Vajda, Z., Pedersen, M., Füchtbauer, E.-M., Wertz, K., Stodkilde-Jørgensen, H., Sulyok, E., Doczi, T., Neely, N. D., Agre, P., Frokiar, J. & Nielsen, S. (2002). Delayed onset of brain endema and mislocalization of aquaporin-4 in dystrophin-null transgenic mice. Proceedings of the National Academy of Sciences (PNAS), 99, 13131-13136.
Valle, M., Zavialov, A., Li, W., Stagg, S. M., Sengupta, J., Nielsen, R. C., Nissen, P., Harvey, S. C., Ehrenberg, M. & Frank, J. (2003). Incorporation of aminoacyl-tRNA into the ribosome as seen by cryo-electron microscopy. Nat. Struct. Biol. ,10, 899-906.

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Doughty, C. E., Wolf, A., Holme, N. M., Jørgensen, P. M., Sandel, B. S., Violle, C., Boyle, B., Kraft, N. J. B., Peet, R. K., Enquist, B. J., Svenning, J.-C., Blake, S. & Galetti, M. (2016). Megafauna extinction, tree species range reduction, and carbon storage in Amazonian forests. Ecography, 39(2), 194-203. https://doi.org/10.1111/ecog.01587
Smith, F. A., Doughty, C. E., Malhi, Y., Svenning, J. C. & Terborgh, J. (2016). Megafauna in the Earth system. Ecography, 39(2), 99-108. https://doi.org/10.1111/ecog.02156
Senigaglia, V., Christiansen, F., Bejder, L., Gendron, D., Lundquist, D., Noren, D. P., Schaffar, A., Smith, J. C., Williams, R., Martinez, E., Stockin, K. & Lusseau, D. (2016). Meta-analyses of whale-watching impact studies: Comparisons of cetacean responses to disturbance. Marine Ecology Progress Series, 542, 251-263. https://doi.org/10.3354/meps11497
Glombitza, C., Adhikari, R. R., Riedinger, N., Gilhooly III, W. P., Hinrichs, K.-U. & Inagaki, F. (2016). Microbial Sulfate Reduction Potential in Coal-Bearing Sediments Down to ~2.5 km below the Seafloor off Shimokita Peninsula, Japan. Frontiers in Microbiology, 7(OCT), Article 1576. https://doi.org/10.3389/fmicb.2016.01576
Pearce, D. A., Magiopoulos, I., Mowlem, M., Tranter, M., Holt, G., Woodward, J. & Siegert, M. (2016). Microbiology: lessons from a first attempt at Lake Ellsworth. Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, 374(2059). https://doi.org/10.1098/rsta.2014.0291
Johansen, A., Browne, P. D., Christensen, L. D., Jacobsen, C. S. & Mørkebjerg Fischer, L. (2016). Microbiota in bio-gas filters for cleaning groundwater polluted with chlorinated solvents. Poster session presented at The Annual Congress of The Danish Microbiological Society - Copenhagen, Denmark, Copenhagen, Denmark.
Maegaard, K., Garcia-Robledo, E., Ottosen, L. D. M., Voigt, N. V., Kofoed, M. & Revsbech, N. P. (2016). Microscale dynamics of H2, CO2 and pH during H2 supply to biogas reactors. Poster session presented at ISME 16 - 16th International Symposium on Microbial Ecology, Montreal, Canada.
Ito, Y., Tanaka, N., Barfod, A., Cho, S.-H., Gale, S., Jobson, R., Kim, Y.-D., Larridon, I., Li, J., Parnell, J. A. N., Philips, S., Prajaksoos, A., Shuto, K., Souladeth, P., Tagane, S., Tanaka, N., Yano, O., Scarpaci, J. & Newman, M. (2016). Molecular phylogeny of Eriocaulon (Eriocaulaceae). Abstract from Australasian Systematic Botany Society, Alice Springs, Australia.
Padilla, C. C., Bristow, L. A., Sarode, N., Garcia-Robledo, E., Gómez Ramírez, E., Benson, C. R., Bourbonnais, A., Altabet, M. A., Girguis, P. R., Thamdrup, B. & Stewart, F. J. (2016). NC10 bacteria in marine oxygen minimum zones. I S M E Journal, 10(8), 2067–2071. https://doi.org/10.1038/ismej.2015.262
Barros, C., Thuiller, W., Georges, D., Boulangeat, I. & Münkemüller, T. (2016). N-dimensional hypervolumes to study stability of complex ecosystems. Ecology Letters, 19(7), 729-742. https://doi.org/10.1111/ele.12617
Marietou, A. & Boden, R. (2016). Nitrate reduction in sulfate-reducing bacteria. FEMS Microbiology Letters, 363(15), Article fnw155. https://doi.org/10.1093/femsle/fnw155
Tougaard, J., Wright, A. J. & Madsen, P. T. (2016). Noise exposure criteria for harbour porpoises. In A. N. Popper & A. Hawkins (Eds.), The effects of noise on aquatic life II (Vol. 875, pp. 1167-1173). Springer.
Olivares, I. & Balslev, H. (2016). Obituary Gloria Galeano (22.4.1958-23.3.2016). Botanical Journal of the Linnean Society, 187. https://doi.org/10.1111/boj.12461
Schweiger, A., Irl, S. D. H., Steinbauer, M., Dengler, J. & Beierkuhnlein, C. (2016). Optimizing sampling approaches along ecological gradients. Methods in Ecology and Evolution, 7(4), 463– 471. https://doi.org/10.1111/2041-210X.12495
Balslev, H., Bernal, R. & Fay, M. F. (2016). Palms - emblems of tropical forests. Botanical Journal of the Linnean Society, 182(2), 195-200. https://doi.org/10.1111/boj.12465
Pellissier, L., Eidesen, P. B., Ehrich, D., Descombes, P., Schoenswetter, P., Tribsch, A., Westergaard, K. B., Alvarez, N., Guisan, A., Zimmermann, N. E., Normand, S., Vittoz, P., Luoto, M., Damgaard, C., Brochmann, C., Wisz, M. S. & Alsos, I. G. (2016). Past climate-driven range shifts and population genetic diversity in arctic plants. Journal of Biogeography, 43(3), 461-470. https://doi.org/10.1111/jbi.12657
Kuzemko, A., Steinbauer, M., Becker, T., Didukh, Y., Dolnik, C., Jeschke, M., Naqinezhad, A., Ugurlu, E., Vassilev, K. & Dengler, J. (2016). Patterns and drivers of phytodiversity in steppe grasslands of Central Podolia (Ukraine). Biodiversity and Conservation, 25(12), 2233-2250. https://doi.org/10.1007/s10531-016-1060-7
Jensen, K. E., Sandel, B. S., Enquist, B., Jørgensen, P. M., Kraft, N., Marcuse-Kubitza, A., McGill, B. J., Holme, N. M., Peet, R. K., Violle, C., Wiser, S. K. & Svenning, J.-C. (2016). Patterns and drivers of plant functional group dominance across the Western Hemisphere: a macroecological re-assessment based on a massive botanical dataset. Botanical Journal of the Linnean Society, 180(2), 141-160. https://doi.org/10.1111/boj.12362
Steinbauer, M., Schweiger, A. & Irl, S. D. H. (2016). Patterns in Biogeography. In R. M. Kliman (Ed.), Encyclopedia of Evolutionary Biology. (Vol. 1, pp. 221–230). Academic Press.
Alstrup, A. K. O. & Wang, T. (2016). Pavlovs hunde. Kaskelot, 209, 8-11.