Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Kjærgaard, R. S. & Wong, B. (2012). Looks Matter: Visual Strategies: A Practical Guide to Graphics for Scientists and Engineers by Felice C. Frankel and Angela H. DePace. Cell, 149, 1420-1421. https://doi.org/10.1016/j.cell.2012.06.002

Wong, B. & Kjærgaard, R. S. (2012). Pencil and paper. A unique set of tools facilitate thinking and hypothesis generation. Nature Methods, 9(11), 1037. https://doi.org/doi:10.1038/nmeth.2223

Kjærgaard, R. S. (2012). Visuelle løsninger for biovidenskaberne—nu og i fremtiden. Carlsberg Foundation.

Kjærgaard, R. S. & Rennie, C. (2011). Front cover illustration. Analytical Biochemistry, 417(1). http://www.sciencedirect.com/science/journal/00032697/417/1

Kjeldsen, K. K., Mortensen, J., Bendtsen, J., Petersen, D., Lennert, K. & Rysgaard, S. (2014). Ice-dammed lake drainage cools and raises surface salinities in a tidewater outlet glacier fjord, west Greenland. Geophysical Research Letters, 119(6), 1310-1321. https://doi.org/10.1002/2013JF003034

Arendt, K. E., Juul-Pedersen, T., Mortensen, J., Blicher, M. E. & Rysgaard, S. (2013). A 5-years study of seasonal patterns in mesozooplankton community structure in a sub-arctic fjord reveals dominance of Microsetella norvegica (Crustacea, Copepoda). Journal of Plankton Research, 35(1), 105-120. https://doi.org/10.1093/plankt/fbs087

Sejr, M. K., Krause-Jensen, D., Dalsgaard, T., Ruiz-Halpern, S., Duarte, C. M., Middelboe, M., Glud, R. N., Bendtsen, J., Balsby, T. J. S. & Rysgaard, S. (2014). Seasonal dynamics of autotrophic and heterotrophic plankton metabolism and P_CO₂ in a subarctic Greenland fjord. Limnology and Oceanography, 59(5), 1764-1778. https://doi.org/10.4319/lo.2014.59.5.1764

Werner, A., Ramlau-Hansen, C. H., Jeppesen, S. K., Thulstrup, A. M. & Olsen, J. (2007). Caesarean delivery and risk of developing asthma in the offspring. Acta Paediatrica, 96(4), 595-6. https://doi.org/10.1111/j.1651-2227.2006.00150.x

Ley, M. B., Boulineau, S., Janot, R., Filinchuk, Y. & Jensen, T. R. (2012). New Li Ion Conductors and Solid State Hydrogen Storage Materials: LiM(BH₄)₃Cl, M = La, Gd. The Journal of Physical Chemistry Part C, 116(40), 21267-21276. https://doi.org/10.1021/jp307762g

Picozzi, M., Verdezoto, N., Pouke, M., Vatjus-Anttila, J. & Quigley, A. (2013). Traffic Visualization: Applying Information Visualization Techniques to Enhance Traffic Planning. In GRAPP 2013 IVAPP 2013 : Proceedings of the 8thInternational Conference on Computer Graphics Theory and Applications (pp. 554-557). SCITEPRESS Digital Library. https://doi.org/10.5220/0004291605540557

Mi, J.-L., Bremholm, M., Bianchi, M., Borup, K. A., Johnsen, S., Søndergaard, M., Guan, D., Hatch, R., Hofmann, P. & Iversen, B. B. (2013). Phase Separation and Bulk p-n Transition in Single Crystals of Bi₂Te₂Se Topological Insulator. Advanced Materials, 25(6), 889-893. https://doi.org/10.1002/adma.201203542

Bianchi, M., Hatch, R., Li, Z., Hofmann, P., Song, F., Mi, J., Iversen, B. B., El-Fattah, Z. M. A., Löptien, P., Zhou, L., Khajetoorians, A. A., Weibe, J., Wiesendanger, R. & Wells, J. W. (2012). Robust Surface Doping of Bi₂Se₃ by Rubidium Intercalation. A C S Nano, 6(8), 7009-7015. https://doi.org/10.1021/nn3021822

Auneau-Cognacq, J., Ziegel, J. & Jensen, E. B. V. (2013). Rotational integral geometry of tensor valuations. Advances in Applied Mathematics, 50(3), 429-444. https://doi.org/10.1016/j.aam.2012.10.006

Sério, S., Nunes, Y., Hoffmann, S. V., Mason, N. J., Duflot, D. & Limão-Vieira, P. (2012). Electronic State Spectroscopy of 1,4-Pentadiene As Studied by VUV Photoabsorption Spectroscopy and ab Initio Calculations. Journal of Physical Chemistry Part A: Molecules, Spectroscopy, Kinetics, Environment and General Theory, 116, 8176−8184. https://doi.org/10.1021/jp305905j

Smialek, M. A., Hubin-Franskin, M.-J., Duflot, D., Mason, N. J., Hoffmann, S. V., de Souza, G. G. B., Rodrigues, A. M. F., Rodrigues, F. N. & Limão-Vieira, P. (2012). Limonene: electronic state spectroscopy by high-resolution vacuum ultraviolet photoabsorption, electron scattering, He(I) photoelectron spectroscopy and ab initio calculations. Physical Chemistry Chemical Physics, 14, 2056–2064. https://doi.org/10.1039/c2cp22847e

Helwig, M., Hoshino, A., Berridge, C., Lee, S.-N., Lorenzen, N., Otzen, D., Eriksen, J. & Lindberg, I. (2013). The neuroendocrine protein 7B2 suppresses the aggregation of neurodegenerative disease-related proteins. Journal of Biological Chemistry, 288(2), 1114.

Feilberg, A., Nielsen, J. L., Mosbæk, F., Nielsen, M., Revsbech, N. P. & Ottosen, L. D. M. (2012). Optimering af biogasprocessen. Forskning i Bioenergi, 28-29. http://www.biopress.dk/PDF/bioenergi_2012/Bioenergi_2012.pdf

Deheuvels, S., S., B., Fischer, D., Goupil, M. J., Mosser, B., García, R. A., Chaplin, W. J., Pinsonneault, M., Davies, G. R., Elsworth, Y., Antia, H. M., Appourchaux, T., Benomar, O., Gizon, L., Stahn, T., Reese, D. R., Regulo, C., Schou, J., Casagrande, L. ... Kinemuchi, K. (2012). Seismic evidence for a rapidly rotating core in a lower-giant-branch star observed with kepler. Astrophysical Journal, 756(1). https://doi.org/10.1088/0004-637X/756/1/19

Bianchi, M., Hatch, R., Guan, D., Planke, T., Mi, J., Iversen, B. B. & Hofmann, P. (2012). The electronic structure of clean and adsorbate-covered Bi2Se3: an angle-resolved photoemission study. Semiconductor Science and Technology, 27. https://doi.org/10.1088/0268-1242/27/12/124001

Strózecka, A., Eiguren, A., Bianchi, M., Guan, D., Haldan Voetmann, C., Bao, S., Hofmann, P. & Pascual, J. (2012). Unconventional spin texture of a topologically nontrivial semimetal Sb(110). New Journal of Physics, 14, 103026. https://doi.org/10.1088/1367-2630/14/10/103026

Ulstrup, S., Bianchi, M., Guan, D., Baraldi, A., Alfè, D., Hornekær, L. & Hofmann, P. (2012). High-temperature behavior of supported graphene: Electron-phonon coupling and substrate-induced doping. Physical Review B, 86. https://doi.org/10.1103/PhysRevB.86.161402

Lizzit, S., Larciprete, R., Lacovig, P., Dalmiglio, M., Orlando, F., Baraldi, A., Gammelgaard, L., Barreto, L., Bianchi, M., Perkins, E. & Hofmann, P. (2012). Transfer-Free Electrical Insulation of Epitaxial Graphene from its Metal Substrate. Nano Letters, 12, 4503−4507. https://doi.org/10.1021/nl301614j

Honolka, J., Khajetoorians, A. A., Sessi, V., Wehling, T. O., Stepanow, S., Mi, J., Iversen, B. B., Schlenk, T., Wiebe, J., Brookes, N. B., Lichtenstein, A. I., Hofmann, P., Kern, K. & Wiesendanger, R. (2012). In-Plane Magnetic Anisotropy of Fe Atoms on Bi₂Se₃ (111). Physical Review Letters, 108, 256811. https://doi.org/10.1103/PhysRevLett.108.256811

Bianchi, M., Guan, D., Strózecka, A., Haldan Voetmann, C., Bao, S., Pascual, J. I., Eiguren, A. & Hofmann, P. (2012). Surface states on a topologically nontrivial semimetal: The case of Sb(110). Physical Review B, 85, 155431. https://doi.org/10.1103/PhysRevB.85.155431

Nielsen, L. M., Hoffmann, S. V. & Nielsen, S. B. (2012). Probing electronic coupling between adenine bases in RNA strands from synchrotron radiation circular dichroism experiments. Chemical Communications, 48, 10425–10427. https://doi.org/10.1039/c2cc35201j

Huber, D., Ireland, M. J., Bedding, T. R., Maestro, V., White, T. R., Stello, D., Brandão, I. M., Sousa, S. G., Cunha, M. S., Monteiro, M. J. P. F. G., Piau, L., Bruntt, H., Aguirre, V. S., Chaplin, W. J., Christensen-Dalsgaard, J., Kjeldsen, H., Casagrande, L., Molenda-Zakowicz, J., Barclay, T. ... Uytterhoeven, K. (2012). Fundamental properties of stars using asteroseismology from Kepler and CoRoT and interferometry from the CHARA Array. Astrophysical Journal, 760(1). https://doi.org/10.1088/0004-637X/760/1/32

Aguirre, V. S., Chaplin, W. J., Bedding, T. R., Christensen-Dalsgaard, J., Kjeldsen, H., Weiss, A., Serenelli, A. M., García, R. A., Mathur, S., Pinsonneault, M. H., Casagrande, L., Basu, S., Campante, T. L., Monteiro, M. J. P. F. G., Miglio, A., Elsworth, Y., Hekker, S., Huber, D., Ballot, J. ... Uddin, K. (2012). Verifying asteroseismically determined parameters of Kepler stars using Hipparcos parallaxes: Self-consistent stellar properties and distances. Astrophysical Journal, 757(1), 99. https://doi.org/10.1088/0004-637X/757/1/99

Ford, E. B., Ragozzine, D., Holman, M. J., Rowe, J. F., Barclay, T., Borucki, W. J., Bryson, S. T., Caldwell, D. A., Kinemuchi, K., Koch, D. G., Lissauer, J. J., Still, M., Tenenbaum, P., Steffen, J. H., Batalha, N. M., Fabrycky, D. C., Gautier, T. N., Ibrahim, K. A., Uddin, K. ... Welsh, W. (2012). Transit timing observations from Kepler. V. Transit timing variation candidates in the first sixteen months from polynomial models. Astrophysical Journal, 756(2). https://doi.org/10.1088/0004-637X/756/2/185

Jacobsen, C. B., Albrecht, L., Udmark, J. R. K. & Jørgensen, K. A. (2012). Enantioselective Formation of Substituted 3,4-Dihydrocoumarins by a Multicatalytic One-Pot Process. Organic Letters, 14(21), 5526-5529. https://doi.org/10.1021/ol302627u

Brandt, J., Silver, J. D., Frohn, L., Geels, C., Gross, A., Hansen, A. B., Hansen, K. M., Brandt Hedegaard, G., Skjøth, C. A., Villadsen, H., Zare, A. & Christensen, J. H. (2012). An integrated model study for Europe and North America using the Danish Eulerian Hemispheric Model with focus on intercontinental transport of air pollution. Atmospheric Environment, 53, 156-176. https://doi.org/10.1016/j.atmosenv.2012.01.011

Guggenberger, E., Kolenberg, K., Nemec, J. M., Smolec, R., Benkő, J. M., Ngeow, C.-C., Cohen, J. G., Sesar, B., Szabó, R., Catelan, M., Moskalik, P., Kinemuchi, K., Seader, S. E., Smith, J. C., Tenenbaum, P. & Kjeldsen, H. (2012). The complex case of V445 Lyr observed with Kepler: two Blazhko modulations, a non-radial mode, possible triple mode RR Lyrae pulsation, and more. Royal Astronomical Society. Monthly Notices, 424(1), 649-665. https://doi.org/10.1111/j.1365-2966.2012.21244.x

Howard, A. W., Marcy, G. W., Bryson, S. T., Jenkins, J. M., Rowe, J. F., Batalha, N. M., Borucki, W. J., Koch, D. G., Dunham, E. W., Gautier, T. N. . III., Van Cleve, J., Cochran, W. D., Latham, D. W., Lissauer, J. J., Torres, G., Brown, T. M., Gilliland, R. L., Buchhave, L. A., Caldwell, D. A. ... MacQueen, P. J. (2012). Planet Occurrence within 0.25 AU of Solar-type Stars from Kepler. The Astrophysical Journal Letters, 201(2). https://doi.org/10.1088/0067-0049/201/2/15

Appourchaux, T., Chaplin, W. J., García, R. A., Gruberbauer, M., Verner, G. A., Antia, H. M., Benomar, O., Campante, T. L., Davies, G. R., Deheuvels, S., Handberg, R., Hekker, S., Howe, R., Régulo, C., Salabert, D., Bedding, T. R., White, T. R., Ballot, J., Mathur, S. ... Barclay, T. (2012). Oscillation mode frequencies of 61 main-sequence and subgiant stars observed by Kepler. Astronomy & Astrophysics (A&A), 543. https://doi.org/10.1051/0004-6361/201218948

Hino, S., Fonneløp, J. E., Corno, M., Zavorotynska, O., Damin, A., Richter, B., Baricco, M., Jensen, T. R., Sørby, M. H. & Hauback, B. C. (2012). Halide Substitution in Magnesium Borohydride. The Journal of Physical Chemistry Part C, 116(23), 12482–12488. https://doi.org/10.1021/jp303123q

Metcalfe, T. S., Chaplin, W. J., Appourchaux, T., García, R. A., Basu, S., Brandão, I., Creevey, O. L., Deheuvels, S., Doǧan, G., Eggenberger, P., Karoff, C., Miglio, A., Stello, D., Yıldız, M., Çelik, Z., Antia, H. M., Benomar, O., Howe, R., Régulo, C. ... Li, J. (2012). Asteroseismology of the Solar Analogs 16 Cyg A and B from Kepler Observations. The Astrophysical Journal Letters, 748(1). https://doi.org/10.1088/2041-8205/748/1/L10

Pyrc, K., Milewska, A., Kantyka, T., Sroka, A., Maresz, K., Koziel, J., Nguyen, K.-A., Enghild, J. J., Knudsen, A. D. & Potempa, J. (2013). Inactivation of epidermal growth factor by Porphyromonas gingivalis as a potential mechanism for periodontal tissue damage. Infection and Immunity, 81(1), 55-64. https://doi.org/10.1128/IAI.00830-12

Bisgaard, C. F., Bak, S., Christensen, T., Jensen, O. N., Enghild, J. J. & Wiborg, O. (2012). Vesicular signalling and immune modulation as hedonic fingerprints: proteomic profiling in the chronic mild stress depression model. Journal of Psychopharmacology, 26(12), 1569-1583. https://doi.org/10.1177/0269881112460110

Scilabra, S. D., Troeberg, L., Yamamoto, K., Emonard, H., Thogersen, I., Enghild, J. J., Strickland, D. K. & Nagase, H. (2013). Differential Regulation of Extracellular Tissue Inhibitor of Metalloproteinases-3 Levels by Cell Membrane-bound And Shed Low Density Lipoprotein Receptor-related Protein 1. Journal of Biological Chemistry, 288, 332-342. https://doi.org/10.1074/jbc.M112.393322

Fox, A. D., Mitchell, C., Urquhart, C., Francis, I., Griffin, L. & Stroud, D. (2012). Conflicts and sustainable management: Species Action Framework - the case of the Greenland White-fronted Goose. Abstract from Managing , Edinburgh, United Kingdom.

Jensen, U. B., Ferapontova, E. & Sutherland, D. S. (2012). Quantifying protein adsorption and function at nanostructured materials: enzymatic activity of glucose oxidase at GLAD structured electrodes. Langmuir, 28(30), 11106-11114. https://doi.org/10.1021/la3017672

Abi, A. & Ferapontova, E. (2012). Unmediated by DNA electron transfer in redox-labeled DNA duplexes end-tethered to gold electrodes. Journal of American Chemical Society, 134(35), 14499-14507. https://doi.org/10.1021/ja304864w

Farjami, E., Campos, R. & Ferapontova, E. (2012). Effect of the DNA end of tethering to electrodes on electron transfer in methylene blue-labeled DNA duplexes. Langmuir, 28(46), 16218-16226. https://doi.org/10.1021/la3032336

Ferapontova, E. (2012). Methodological Approaches for Design of Electrochemical Biosensors Based on Electron Transfer Properties of DNA. Abstract from 45th Heyrovsky Discussion, Brno, Czech Republic.

Ferapontova, E. (2012). Electron Transfer Reactions in Redox-Labeled DNA Thethered to Electrodes. Abstract from Self Assembly and Molecular Electronics, Aalborg, Denmark.

Abi, A. & Ferapontova, E. (2012). Development of Electrochemical DNA Biosensors based on Hairpin DNA Architectures with Internal Redox Probes. Abstract from The 63rd Annual Meeting of the International Society of Electrochemistry, Prague, Czech Republic.

Jensen, U. B., Sutherland, D. S. & Ferapontova, E. (2012). Activation of laccase bioelectrocatalysis of O2 reduction to H2O by carbon nanoparticles. Abstract from The 63rd Annual Meeting of the International Society of Electrochemistry, Prague, Czech Republic.

Ferapontova, E., Fernandez, E., Larsson, J. T., Munro, A. W., Gorton, L. & von Wachenfeldt, C. (2012). Electron Transfer Reactions and Cyanide Binding of Truncated Hemoglobin from Bacillus subtilis. Abstract from The 63rd Annual Meeting of the International Society of Electrochemistry, Prague, Czech Republic.

Ferapontova, E., Abi, A. & Farjami, E. (2012). Kinetic Studies of Electron Transfer Reactions in Redox-Labeled DNA Tethered to Electrodes. Abstract from The 63rd Annual Meeting of the International Society of Electrochemistry, Prague, Czech Republic.

Groenen, M. A. M., Archibald, A. L., Uenishi, H., Tuggle, C. K., Takeuchi, Y., Rothschild, M. F., Rogel-Gaillard, C., Park, C., Milan, D., Megens, H.-J., Li, S., Larkin, D. M., Kim, H., Frantz, L. A. F., Caccamo, M., Ahn, H., Aken, B. L., Anselmo, A., Anthon, C. ... Schook, L. B. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491(7424), 393-398. https://doi.org/10.1038/nature11622

Block, J., Zinner, N. T. & Bruun, G. (2012). Density wave instabilities of tilted fermionic dipoles in a multilayer geometry. New Journal of Physics, 14, 105006. https://doi.org/10.1088/1367-2630/14/10/105006

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