Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Ye, J., Zhang, D., Salli, S., Li, Y., Han, F., Mai, Y., Rosei, F., Li, Y., Yang, Y., Besenbacher, F., Niemantsverdriet, H., Richards, E. & Su, R. (2023). Heterogeneous Photocatalytic Recycling of FeX₂/FeX₃ for Efficient Halogenation of C−H Bonds Using NaX. Angewandte Chemie - International Edition, 62(23), Article e202302994. https://doi.org/10.1002/anie.202302994

Bocková, J., Jones, N. C., Topin, J., Hoffmann, S. V. & Meinert, C. (2023). Uncovering the chiral bias of meteoritic isovaline through asymmetric photochemistry. Nature Communications, 14(1), Article 3381. https://doi.org/10.1038/s41467-023-39177-y

Negrutskii, B. S., Shalak, V. F., Novosylna, O. V., Porubleva, L. V., Lozhko, D. M. & El'skaya, A. V. (2023). The eEF1 family of mammalian translation elongation factors. BBA advances, 3, Article 100067. https://doi.org/10.1016/j.bbadva.2022.100067

Nørgaard, J., Margold, M., Jansen, J. D., Kurbanov, R., Szuman, I., Andersen, J. L., Olsen, J. & Faurschou Knudsen, M. (2023). Absence of Large-Scale Ice Masses in Central Northeast Siberia During the Late Pleistocene. Geophysical Research Letters, 50(10), Article e2023GL103594. https://doi.org/10.1029/2023GL103594

Magnard, N. P. L., Sørensen, D. R., Kantor, I., Jensen, K. M. Ø. & Jørgensen, M. R. V. (2023). Sub-second pair distribution function using a broad bandwidth monochromator. Journal of Applied Crystallography, 56(3), 825-833. https://doi.org/10.1107/S1600576723004016

Sun, B., Lv, X., Wang, S., Ulrich, T., Dai, Z. & Ruan, B. (2023). Evolution of an ancient VMS ore-forming system recorded by pyrite and sphalerite mineral texture, trace elements, and sulfur isotope: A case study from the Huangtupo Cu-Zn (-Au) deposit, Eastern Tianshan, NW China. Ore Geology Reviews, 158, Article 105475. https://doi.org/10.1016/j.oregeorev.2023.105475

Zheng, X., Schwark, L., Stockhausen, M., Luo, Q., Wu, J., Zhong, N., Schovsbo, N. H. & Sanei, H. (2023). Effects of synthetic maturation on phenanthrenes and dibenzothiophenes over a maturity range of 0.6 to 4.7% EASY%Ro. Marine and Petroleum Geology, 153, Article 106285. https://doi.org/10.1016/j.marpetgeo.2023.106285

Hao, D., Wang, X., Yang, Y., Chen, H., Thomsen, B. & Holm, L. E. (2023). MicroRNA sequence variation can impact interactions with target mRNA in cattle. Gene, 868, Article 147373. https://doi.org/10.1016/j.gene.2023.147373

Pelizzola, M., Laursen, R. & Hobolth, A. (2023). Model selection and robust inference of mutational signatures using Negative Binomial non-negative matrix factorization. BMC Bioinformatics, 24(1), Article 187. https://doi.org/10.1186/s12859-023-05304-1

Thomas, H., Brigaud, B., Blaise, T., Zordan, E., Zeyen, H., Catinat, M., Andrieu, S., Mouche, E. & Fleury, M. (2023). Upscaling of geological properties in a world-class carbonate geothermal system in France: From core scale to 3D regional reservoir dimensions. Geothermics, 112, Article 102719. https://doi.org/10.1016/j.geothermics.2023.102719

Rooney, T. O., Brown, E. L., Bastow, I. D., Arrowsmith, J. R. & Campisano, C. J. (2023). Magmatism during the continent – ocean transition. Earth and Planetary Science Letters, 614, Article 118189. https://doi.org/10.1016/j.epsl.2023.118189

Povlsen, K. & Kristiansen, S. M. (2023). Relationship between Fields, banks and farmstead at an early Iron Age site in Northern Denmark. Journal of Archaeological Science: Reports, 49, Article 104042. https://doi.org/10.1016/j.jasrep.2023.104042

Christensen, K., Nielsen, M. S. & Podolskij, M. (2023). High-dimensional estimation of quadratic variation based on penalized realized variance. Statistical Inference for Stochastic Processes, 26(2), 331-359. https://doi.org/10.1007/s11203-022-09282-8

Duncan, A. L. & Pezeshkian, W. (2023). Mesoscale simulations: An indispensable approach to understand biomembranes. Biophysical Journal, 122(11), 1883-1889. https://doi.org/10.1016/j.bpj.2023.02.017

Funch, P., Kealy, R. A., Goldstein, J., Brewer, J. R., Solovyeva, V. & Riisgård, H. U. (2023). Fate of microplastic captured in the marine demosponge Halichondria panicea. https://doi.org/10.2139/ssrn.4467283

Menezes, R. F., Svenning, J. C., Fu, H., De Meester, L., Lauridsen, T. L., Søndergaard, M., Conde-Porcuna, J. M. & Jeppesen, E. (2023). Fish Beta Diversity Patterns across Environmental Gradients in 63 European Shallow Lakes: Effects of Turbidity, Nutrient Enrichment, and Exotic Species. Water, 15(10), Article 1831. https://doi.org/10.3390/w15101831

Olsen, J., Daróczi, T. T. & Kanstrup, M. (2023). Comparing methods for CO₂ purification of cremated bone samples. Radiocarbon, 65(3), 809-817. https://doi.org/10.1017/RDC.2023.34

Liu, J., McRae, E. K. S., Zhang, M., Geary, C., Andersen, E. S. & Ren, G. (2023). Tertiary structure of single-instant RNA molecule reveals folding landscape. https://doi.org/10.1101/2023.05.19.541511

Wu, J., Luo, Q., Zhong, N., Goodarzi, F., Suchý, V., Sanei, H., Skovsted, C. B., Li, M., Zhang, Y., Li, D., Wu, J. & Song, D. (2023). Chemical structure and thermal maturation of the vitrinite-like maceral in the Lower Paleozoic shales: Insights from Raman spectroscopy of artificial pyrolysis residues. Journal of Analytical and Applied Pyrolysis, 172, Article 106024. https://doi.org/10.1016/j.jaap.2023.106024

Shao, Y., Zhou, L., Li, F., Zhao, L., Zhang, B. L., Shao, F., Chen, J. W., Chen, C. Y., Bi, X., Zhuang, X. L., Zhu, H. L., Hu, J., Sun, Z., Li, X., Wang, D., Rivas-González, I., Wang, S., Wang, Y. M., Chen, W. ... Wu, D. D. (2023). Phylogenomic analyses provide insights into primate evolution. Science (New York, N.Y.), 380(6648), 913-924. https://doi.org/10.1126/science.abn6919

Griffiths, M. P., Grombacher, D., Kass, M. A., Vang, M., Liu, L. & Larsen, J. J. (2023). A surface NMR forward in a dot product. Geophysical Journal International, 234(3), 2284-2290. https://doi.org/10.1093/gji/ggad203

Scholl, C. L., Holmstrup, M., Graham, L. A. & Davies, P. L. (2023). Polyproline type II helical antifreeze proteins are widespread in Collembola and likely originated over 400 million years ago in the Ordovician Period. Scientific Reports, 13(1), Article 8880. https://doi.org/10.1038/s41598-023-35983-y

Marini, V., Nikulenkov, F., Samadder, P., Juul, S., Knudsen, B. R. & Krejci, L. (2023). MUS81 cleaves TOP1-derived lesions and other DNA–protein cross-links. BMC Biology, 21(1), Article 110. https://doi.org/10.1186/s12915-023-01614-1

Rivas-González, I., Rousselle, M., Li, F., Zhou, L., Dutheil, J. Y., Munch, K., Shao, Y., Wu, D., Schierup, M. H. & Zhang, G. (2023). Pervasive incomplete lineage sorting illuminates speciation and selection in primates. Science, 380(6648), eabn4409. Article eabn4409. https://doi.org/10.1126/science.abn4409

Roelsgaard, M., Kløve, M., Christensen, R., Bertelsen, A. D., Broge, N. L. N., Kantor, I., Sørensen, D. R., Dippel, A.-C., Banerjee, S., Zimmermann, M. V., Glaevecke, P., Gutowski, O., Jørgensen, M. R. V. & Iversen, B. B. (2023). A reactor for time-resolved X-ray studies of nucleation and growth during solvothermal synthesis. Journal of Applied Crystallography, 56(3), 581-588. https://doi.org/10.1107/S1600576723002339

Kong, J., Manjón-Sanz, A., Liu, J., Marlton, F. P., Lo, T. W., Lei, D., Jørgensen, M. R. V. & Pramanick, A. (2023). Scaling behavior of order parameters for the hybrid improper ferroelectric (Ca, Sr)₃Ti₂O₇. Physical Review B, 107(22), Article 224103. https://doi.org/10.1103/PhysRevB.107.224103

Gao, H., Hamp, T., Ede, J., Schraiber, J. G., McRae, J., Singer-Berk, M., Yang, Y., Dietrich, A. S. D., Fiziev, P. P., Kuderna, L. F. K., Sundaram, L., Wu, Y., Adhikari, A., Field, Y., Chen, C., Batzoglou, S., Aguet, F., Lemire, G., Reimers, R. ... Farh, K. K. H. (2023). The landscape of tolerated genetic variation in humans and primates. Science (New York, N.Y.), 380(6648), Article abn8197. https://doi.org/10.1126/science.abn8197

Bernard, C., Santos, G. S., Deere, J. A., Rodriguez-Caro, R., Capdevila, P., Kusch, E., Gascoigne, S. J. L., Jackson, J. & Salguero-Gómez, R. (2023). MOSAIC - A Unified Trait Database to Complement Structured Population Models. Scientific Data, 10(1), Article 335. https://doi.org/10.1038/s41597-023-02070-w

Baumann, C., Hussain, S. T., Roblíčková, M., Riede, F., Mannino, M. & Bocherens, H. (2023). Evidence for hunter-gatherer impacts on raven diet and ecology in the Gravettian of Southern Moravia. Nature Ecology & Evolution, 7(8), 1302-1314. https://doi.org/10.1038/s41559-023-02107-8

Sørensen, E. F., Harris, R. A., Zhang, L., Raveendran, M., Kuderna, L. F. K., Walker, J. A., Storer, J. M., Kuhlwilm, M., Fontsere, C., Seshadri, L., Bergey, C. M., Burrell, A. S., Bergman, J., Phillips-Conroy, J. E., Shiferaw, F., Chiou, K. L., Chuma, I. S., Keyyu, J. D., Fischer, J. ... Rogers, J. (2023). Genome-wide coancestry reveals details of ancient and recent male-driven reticulation in baboons. Science (New York, N.Y.), 380(6648), Article eabn8153. https://doi.org/10.1126/science.abn8153

Zhang, B. L., Chen, W., Wang, Z., Pang, W., Luo, M. T., Wang, S., Shao, Y., He, W. Q., Deng, Y., Zhou, L., Chen, J., Yang, M. M., Wu, Y., Wang, L., Fernández-Bellon, H., Molloy, S., Meunier, H., Wanert, F., Kuderna, L. ... Wu, D. D. (2023). Comparative genomics reveals the hybrid origin of a macaque group. Science Advances, 9(22), Article eadd3580. https://doi.org/10.1126/sciadv.add3580

Alstrup, A. K. O., Busk, M., Dittrich, A., Hansen, K., Wang, T., Damkjær, M., Andersen, J. & Lauridsen, H. (2023). Special challenges in PET imaging of ectothermic vertebrates. Seminars in Nuclear Medicine, 53(5), 577-585. https://doi.org/10.1053/j.semnuclmed.2023.06.006

Lunding, M. S., Grønbæk, J. E., Grymer, N., Wells, T., Houben, S. & Petersen, M. G. (2023). Reality and Beyond: Proxemics as a Lens for Designing Handheld Collaborative Augmented Reality. Proceedings of the ACM on Human-Computer Interaction, 7(ISS), 21-40. Article 427. https://doi.org/10.1145/3626463

Lecoq, P., Gonzalez, A. J., Auffray, E., Konstantinou, G., Nuyts, J., Prior, J. O., Martinez Turtos, R. & Varela, J. (2023). Fast Timing in Medical Imaging. IEEE Transactions on Radiation and Plasma Medical Sciences, 7(5), 429-452. https://doi.org/10.1109/TRPMS.2023.3259464

Sørensen, E. S. & Christensen, B. (2023). Milk Osteopontin and Human Health. Nutrients, 15(11), Article 2423. https://doi.org/10.3390/nu15112423

Kruk, M. B., Vibel, T., Arlt, J., Kulik, P., Pawłowski, K. & Rzążewski, K. (2023). Fock State Sampling Method - Characteristic Temperature of Maximal Fluctuations for Interacting Bosons in Box Potentials. Acta Physica Polonica A, 143(6), S171-S178. https://doi.org/10.12693/APhysPolA.143.S171

Lautrup, S., Myrup Holst, C., Yde, A., Asmussen, S., Thinggaard, V., Larsen, K., Laursen, L. S., Richner, M., Vaegter, C. B., Prieto, G. A., Berchtold, N., Cotman, C. W. & Stevnsner, T. (2023). The role of aging and brain-derived neurotrophic factor signaling in expression of base excision repair genes in the human brain. Aging Cell, 22(9), Article e13905. https://doi.org/10.1111/acel.13905

Eme, L., Tamarit, D., Eva, C., Stairs, C. W., De Anda, V., Schön, M. E., Seitz , K. W., Dombrowski, N., Levis, W. H., Homa, F., Saw, J. H., Lombard, J., Nunoura, T., Li, W.-J., Hua, Z.-S., Chen, L.-X., Banfield, J., St John, E., Reysenbach, A.-L. ... Ettema, T. JG. (2023). Inference and reconstruction of the heimdallarchaeial ancestry of eukaryotes. Nature, 618(7967), 992-999. https://doi.org/10.1038/s41586-023-06186-2

Liu, L., Auken, E., Domenzain, D., Maurya, P. K., Bording, T. S., Bjerre, B., Vela, I. & Christiansen, A. V. (2022). A 4D Cross-Borehole Direct Current Resistivity System for Monitoring In-Situ Groundwater Remediation. In 28th European Meeting of Environmental and Engineering Geophysics, Held at the Near Surface Geoscience Conference and Exhibition 2022, NSG 2022 European Association of Geoscientists and Engineers. https://doi.org/10.3997/2214-4609.202220117

Sønderby, T. V., Louros, N. N., Khodaparast, L., Khodaparast, L., Madsen, D. J., Olsen, W. P., Moonen, N., Nagaraj, M., Sereikaite, V., Strømgaard, K., Rousseau, F., Schymkowitz, J. & Otzen, D. E. (2023). Sequence-targeted Peptides Divert Functional Bacterial Amyloid Towards Destabilized Aggregates and Reduce Biofilm Formation. Journal of Molecular Biology, 435(11), 168039. Article 168039. https://doi.org/10.1016/j.jmb.2023.168039

Kristiansen, S. M. & Christiansen, A. V. (2023). Professor og lektor: Underdimensionering af klima- og miljøuddannelser koster samfundet dyrt. Altinget. https://www.altinget.dk/miljoe/artikel/professor-og-lektor-lav-dimensionering-paa-klimauddannelser-koster-samfundet-dyrt

Kristiansen, S. M. (2023). Jorden, jordbunden – og alt det andet. Geografisk Orientering, 2023(2), 10-17. Article 1. http://geografforbundet.dk/geografisk-orientering/geografisk-orientering-22023/

Wollesen, M., Mikkelsen, K., Tvilum, M. S., Vestergaard, M., Wang, M., Meyer, R. L., Ingmer, H., Poulsen, T. & Tørring, T. (2023). Polyether Ionophore Antibiotics Target Drug-Resistant Clinical Isolates, Persister Cells, and Biofilms. Microbiology Spectrum, 11(4), Article e0062523. https://doi.org/10.1128/spectrum.00625-23

Nilsson, I.-E. F., Hoffmann, C. C. & Kristiansen, S. M. (2023). Minivådområder tilbageholder tungmetaller. Vand & Jord, 2023(2), 62-64. http://vand-og-jord.dk/seneste/

Jacobsen, M. W., Nygaard, R., Hansen, B. K., Broberg, M., Hansen, M. M. & Nielsen, E. E. (2023). Observing the Arctic: A comparison of environmental DNA (eDNA) and electrofishing for monitoring Arctic char and Atlantic salmon. Environmental DNA, 5(4), 782-795. https://doi.org/10.1002/edn3.442

Williams, C. J. A. & Bertelsen, M. F. (2023). Anesthesia and analgesia in reptiles. In M. C. Dyson, P. Jirkof, J. Lofgren, E. A. Nunamaker & D. Pang (Eds.), Anesthesia and Analgesia in Laboratory Animals (3 ed., pp. 599-627). Academic Press. https://doi.org/10.1016/B978-0-12-822215-7.00009-3

Williams, C. J. A. & Mads, B. (2023). Anesthesia and analgesia in amphibians. In M. C. Dyson, P. Jirkof, J. Lofgren, E. A. Nunamaker & D. Pang (Eds.), Anesthesia and Analgesia in Laboratory Animals (3 ed., pp. 629-646). Academic Press. https://doi.org/10.1016/B978-0-12-822215-7.00006-8

Bundgaard, A., Gruszczyk, A. V., Prag, H. A., Williams, C., McIntyre, A., Ruhr, I. M., James, A. M., Galli, G. L. J., Murphy, M. P. & Fago, A. (2023). Low production of mitochondrial reactive oxygen species after anoxia and reoxygenation in turtle hearts. Journal of Experimental Biology, 226(9), Article jeb245516. https://doi.org/10.1242/jeb.245516