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Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Budde, M., Nielsen, B. B., Jones, R., Goss, J. & Öberg, S. (1996). Local modes of the H2* dimer in germanium. Physical Review B, 54, 5485-5494.
Hoffmann, L., Bach, J. C., Nielsen, B. B., Leary, P., Jones, R. & Öberg, S. (1997). Substitutional carbon in germanium. Physical Review B, 55, 11167.
Saunders, A. M., Kristiansen, A., Skovhus, T., Revsbech, N. P. & Schramm, A. (2006). Monitoring of potable water quality using Bacteroides as a fecal indicator. In The Hidden Powers - Microbial Communities in Action. Proceedings of the 11th International Symposium on Microbial Ecology (ISME-11). Vienna, Austria (pp. 291). International Society for Microbial Ecology. http://www.kenes.com/isme/program/search.asp
Nielsen, B. B., Johannesen, P., Stallinga, P., Bonde Nielsen, K. & Byberg, J. R. (1997). Identification of the silicon vacancy containing a single hydrogen atom by EPR. Physical Review Letters, 79, 1507.
Stallinga, P. & Nielsen, B. B. (1997). A study of the di-hydrogen-monovacancy defect in silicon. Acta Physica Polonica A, 92, 989.
Budde, M., Nielsen, B. B., Leary, P., Goss, J., Jones, R., Briddon, P. R., Öberg, S. & Breuer, S. J. (1998). Identification of the hydrogen-saturated self-interstitials in silicon and germanium. Physical Review B, 57, 4397.
Stallinga, P., Johannesen, P., Herstrøm, S., Bonde Nielsen, K., Nielsen, B. B. & Byberg, J. R. (1998). Electron paramagnetic resonance study of hydrogen-vacancy defects in crystalline silicon. Physical Review B, 58, 3842.
Lavrov, E. A., Weber, J., Huang, L. & Nielsen, B. B. (2001). Vacancy-hydrogen defects in silicon studied by Raman spectroscopy. Physical Review B, 64, 35204.
Weinstein, M. G., Jiang, F., Stavola, M., Nielsen, B. B., Usui, A. & Mizuta, M. (2001). Hydrogen vibrational lines in HVPE GaN. Physica B, 308-310, 3.
Lavrov, E. V., Weber, J., Huang, L. & Nielsen, B. B. (2001). Raman scattering study of vacancy-hydrogen related defects in silicon. Physica B, 308-310, 206.
Davies, G., Hayama, S., Hao, S., Nielsen, B. B., Coutinho, J., Sanati, M., Estreicher, S. K. & Itoh, K. M. (2005). Host isotope effects in on midinfrared optical transitions in silicon. Physical Review B, 71, 115212.
Olesen, J. M., Bascompte, J., Dupont, Y. & Jordano, P. (2006). The smallest of all worlds: Pollination networks. Journal of Theoretical Biology, 240, 270-276.
Marques Pereira, R. N., Nielsen, B. B., Peaker, A. R. & Abrosimov, N. V. (2006). Antibonding configurations of hydrogen in silicon-germanium alloys. Physical Review B, 73, 085201.
Marques Pereira, R. N., Nielsen, B. B., Coutinho, J., Torres, V. J. B. & Briddon, P. R. (2006). Hydrogen self-trapping near silicon atoms in Ge-rich SiGe alloys. Applied Physics Letters, 88, 142112.
Marques Pereira, R. N., Nielsen, B. B., Stavola, M., Sanati, M., Estreicher, S. K. & Mizuta, M. (2006). Local vibrational modes of hydrogen in GaN: observation and theory. Physica B, 376-377, 464.
Coutinho, J., Torres, V. J. B., Marques Pereira, R. N., Nielsen, B. B., Jones, R. & Briddon, P. R. (2006). Theory of anharmonicity on bond-centered hydrogen oscillators in silicon. Physica B, 376-377, 126.
Nielsen, B. B. & Andersen, J. U. (1986). Beam-induced annealing of defects created by implantation at 30 K in Si. In H. J. von Bardeleben (Ed.), Proceedings of the 14th International Conference on Defects in Semiconductors (pp. 1129)
Olajos, J., Nielsen, B. B., Kleverman, M., Omling, P., Emanuelsson, P. & Grimmeiss, H. G. (1989). Excitation spectrum of the interstitial iron donor in silicon. In Proceedings of the 15th International Conference on Defects in Semiconductors ICDS-15 (pp. 397). Trans Tech Publications.
Olajos, J., Kleverman, M., Nielsen, B. B. & Grimmeiss, H. G. (1988). Shallow excited states of the deep silver donor in silicon. In Proceedings of Conference on Shallow Levels in Semiconductors (pp. xx)
Nielsen, B. B., Holbech, J. D., Jones, R., Sitch, P. & Öberg, S. (1993). Observation and theory of the H2 defect in silicon. In Proceedings of the 17th International Conference on Defects in Semiconductors ICDS-17
Nielsen, B. B., Bonde Nielsen, K. & Byberg, J. R. (1993). EPR experiments on hydrogen-implanted silicon crystals: Annealing properties of bond-centre hydrogen. In Proceedings of the 17th International Conference on Defects in Semiconductors ICDS-17
Berg Rasmussen, F., Nielsen, B. B., Jones, R. & Öberg, S. (1993). The nitrogen pair in crystalline silicon studied by ion channeling. In Proceedings of the 17th International Conference on Defects in Semiconductors ICDS-17
Stallinga, P., Johannesen, P., Nielsen, B. B., Bonde Nielsen, K. & Byberg, J. R. (1996). Electron paramagnetic resonance study of hydrogen-implanted silicon. In M. Scheffler & R. Zimmermann (Eds.), Proceedings of 23rd International Conference on the Physics of Semiconductors (pp. 2589). World Scientific Publishing Co. Pte. Ltd..
Bascompte, J., Jordano, P. & Olesen, J. M. (2006). Response to Comment on "Asymmetric Coevolutionary Networks Facilitate Biodiversity Maintenance" Science (Technical Comment), 313(5795), 1887c.
Holm, B., Bonde Nielsen, K. & Nielsen, B. B. (1990). Annealing cycle of a deep state related to hydrogen in silicon. In O. Hansen (Ed.), Proceedings of 14th Nordic Semiconductor Meeting (pp. 157)
Nielsen, B. B. (1990). Hydrogen ion-implanted into silicon. In Proceedings of 14th Nordic Semiconductor Meeting (pp. 85)
Nielsen, B. B., Bonde Nielsen, K. & Holm, B. (1991). Hydrogen ion-implanted into crystalline silicon. In Proceedings of Workshop on Hydrogen Migration and Stability of Hydrogen-Related Complexes in Crystalline Semiconductors (pp. 16)
Bonde Nielsen, K., Nielsen, B. B., Borum, F. L., Byberg, J. & Holm, B. (1994). Metastable defects of hydrogen ion-implanted into silicon. In S. D. Mahanti & P. Jena (Eds.), Proceedings of International Symposium of Local Order of Solids (pp. xx). Nova Science Publishers.
Agheli, H., Malmström, J., Larsson, E. M., Textor, M. & Sutherland, D. (2006). Large Area Protein Nanopattering for Biological Applications. Nano Letters, 6(6), 1165-1171.
Mortensen, G. & Besenbacher, F. (2006). Nanotechnology - Could have a huge impact on foods. Danish dairy & food industry-worldwide, (16).
Lewinsohn, T. M., Prado, P. I., Jordano, P., Bascompte, J. & Olesen, J. M. (2006). Structure in plant-animal interaction assemblages. Oikos, 113(1), 174-184.
Jordano, P., Bascompte, J. & Olesen, J. M. (2006). The Ecological Consequences of Complex Topology and Nested Structure in Pollination Webs. In N. M. Waser & J. Ollerton (Eds.), Plant-Pollinator Interactions: From Specialization to Generalization (pp. 173-199). Chicago Univ. Press.
Pertoldi, C., Kristensen, T. N., Andersen, D. H. & Loeschcke, V. (2006). Developmental instability as an estimator of genetic stress. Heredity, 96, 122-127.
Pertoldi, C., Norup, A.-M., Madsen, A. B., Baagoe, H. J., Randi, E. & Loeschcke, V. (2006). No evidence of past bottlenecks in two Danish mustelids: results of craniometric and genetic studies in time and space. Biological Journal of the Linnean Society, 88, 541-553.
Kjeldsen, H. (2006). Photoionization cross sections of atomic ions from merged-beam experiments. J. Phys. B: At. Mol. Opt. Phys., 39, R325-R377.
Negro, J. J., Pertoldi, C., Randi, E., Ferrero, J. J., López-Caballero, J. M., Rivera, D. & Korpimäki, E. (2006). Convergent Evolution of Elanus Kites and the Owls. The Journal of Raptor Research, 40(3), 42-45.

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Arpanaei, A., Pillai, S., Meyer, R. L., Besenbacher, F., Bernbom, N., Jensen, R. L., Gram, L., Enghild, J. J., Petersen, S. V. & Kingshott, P. (2008). Bacteria repellent properties of adsorbed fish proteins. Paper presented at Danish Colloid and Interface Society Annual Meeting, Aarhus, Denmark.
Schneider, J. M. & Bilde, T. (2008). Benefits of cooperation with genetic kin in a subsocial spider. Proceedings of the National Academy of Sciences (PNAS), 105(31), 10843-10846. https://doi.org/10.1073/pnas.0804126105
Van Colen, C., Montserrat, F., Herman, PMJ., Middelburg, JJ., Ukendt, R., Gribsholt, B., Andersson, M., Vincx, M., Ysebaert, T. & Degraer, S. (2008). Benthic and biogeochemical recovery after an induced hypoxic event: the structuring role of macrofauna succession. Poster session presented at World Conference on Marine Biodiversity 2008, Valencia, Spain.
Wilson, M., Hanlon, R., Tyack, P. L. & Madsen, P. T. (2008). Big bang? Intense ultrasound does not have any detectable effects on the squid Loligo pealeii. Bioacoustics - the International Journal of Animal Sound and its Recording, 321-323.
Omoregie, E. O., Mastalerz, V., de lange, G., Straub, K. L., Kappler, A., Røy, H., Stadnitskaia, A., Foucher, J.-P. & Boetius, A. (2008). Biogeochemistry and community composition of iron- and sulfur-precipitating microbial mats at the Chefren mud volcano (Nile Deep Sea fan, Eastern Mediterranean). Applied and Environmental Microbiology, 74(10), 3198-3215. https://doi.org/10.1128/AEM.01751-07
Hyldgaard, B. & Brix, H. (2008). Can the invasiveness of Ceratophyllum demersum be related to enhanced phenotypic plasticity?. Poster session presented at CO2 Assimilation in Plants – from genome to biome, Biddeford, ME, United States.
Arias, C. A., Brix, H., Schönborn, A., Müller, R., van Afferden, M., Bulc, T. G., Ekelund, N., Todt, D. & Junge, R. (2008). Changing science perception through hands-on experimentation; "Play with Water": a project in ecological engineering for science education in schools. Poster session presented at Gestion Sostenible del Agua: Reutilización, Tratamiento y Evalución de la Calidad, Medellín, Colombia.
Soto, N. A., Johnson, M. P., Madsen, P. T., Díaz, F., Domínguez, I., Brito, A. & Tyack, P. (2008). Cheetahs of the deep sea: deep foraging sprints in short-finned pilot whales off Tenerife (Canary Islands). Journal of Animal Ecology, 77(5), 936-947. https://doi.org/10.1111/j.1365-2656.2008.01393.x
Jones, B. A., Stanton, T. K., Lavery, A. C., Johnson, M. P., Madsen, P. T. & Tyack, P. L. (2008). Classification of broadband echoes from prey of a foraging Blainville's beaked whale. Acoustical Society of America. Journal, 123(3), 1753-1762.
Normand, S., Svenning, J.-C. & Skov, F. (2008). Climate change impacts on the Danish flora. Poster session presented at DanBIF International Conference on Biodiversity Informatics and Climate Change Impacts on Life, Aarhus, Denmark.
Sørensen, M. M. & Mouritsen, K. N. (2008). Climate warming reinforces the impact of parasitism on coastal communities. Department of Biological Sciences, Marine Ecology.
Vlasáková, B., Kalinová, B., Gustafsson, M. & Teichert, H. (2008). Cockroaches as pollinators of Clusia aff. sellowiana (Clusiaceae) on Inselbergs in French Guiana. Annals of Botany, 295-304.
Boudreau, B. P., Arnosti, C., Jørgensen, B. B. & Canfield, D. E. (2008). Comment on "physical model for the decay and preservation of marine organic carbon". Science Magazine, 319, 1616b-?.
Kjeldsen, K. U., Pinel, N., Lund, M. B., Davidson, S., Stolyar, S., Walcott, R., Parales, R., Richardson, P., Stahl, D. & Schramm, A. (2008). Comparative Genomics of Symbiotic Bacteria in Earthworm Nephridia. Abstract from International Symposium on Microbial Ecology (ISME-12), Cairns, Australia.
Pongsattayapipat, R., Barfod, A. S. & Dransfield, J. (2008). Conservation Status of Thai Palms. Abstract from Flora of Thailand Meeting, Copenhagen, Denmark.
Perry, S. F., Euverman, R., Wang, T., Loong, A. M., Chew, S. F., Ip, Y. K. & Gilmour, K. M. (2008). Control of breathing in African lungfish (Protopterus dolloi): A comparison of aquatic and cocooned (terrestrialized) animals. Respiratory Physiology and Neurobiology, 160, 8-17. https://doi.org/10.1016/j.resp.2007.06.015
Juhler, S., Ottosen, L. D. M., Nielsen, L. P., Schramm, A. & Revsbech, N. P. (2008). Controls of nitrite oxidation in ammonia-removing biological air filters. In 12th International Symposium on Microbial Ecology, ISME 12: Microbial Diversity - Sustaining the Blue Planet (1 ed., Vol. 1, pp. 1). Macmillan Publishers.
Lefevre, S., Bayley, M., Wang, T., Malte, H., Huong, D. & Cong, N. (2008). Critical oxygen tension and the effect of hypoxia on the oxygen consumption of the striped catfish, Pangasius hypophthaimos (Pangasiidae). Comparative Biochemistry and Physiology -Part A : Molecular and Integrative Physiology, 150(3), 119-120. https://doi.org/10.1016/j.cbpa.2008.04.274
C. Jørgensen, S., Overgaard, J., Holmstrup, M. & Westh, P. (2008). Cryoprotectants are metabolic fuels during long term frost exposure in the earthworm Dendrobaena octaedra. . Comparative Biochemistry and Physiology -Part A : Molecular and Integrative Physiology, (3 supl.), S159. https://doi.org/10.1016/j.cbpa.2008.04.414
Jensen, P. D. & Bruhn, A. (2008). Den blå biomasse. Aktuel Naturvidenskab, 6, 12-14.
Stief, P. & Schramm, A. (2008). Denitrifikation und N2O-Produktion im Darm aquatischer Makrofauna-Arten. Abstract from Jahrestagung der Deutschen Gesellschaft für Limnologie, Konstanz, Germany.
Haagensen, L., Jensen, D. H. & Gesser, H. (2008). Dependence of myosin-ATPase on structure bound creatine kinase in cardiac myfibrils from rainbow trout and freshwater turtle. Comparative Biochemistry and Physiology -Part A : Molecular and Integrative Physiology, 150, 404-409. https://doi.org/10.1016/j.cbpa.2008.04.604
Arias, C. A., Vollertsen, J., Langw, K. H., Pedersen, J., Hallager, P., Bruus, A., Laustsen, A., Bundensen, V. W., Nielsen, A. H., Nielsen, N. H., Wium-Andersen, T., Hvitved-Jacobsen, T. & Brix, H. (2008). Desarollo y experimentación de nuevos sistemas para la eliminación de contaminantes presentes en la escorrentía superficial urbana (Life-Treasure). Poster session presented at Gestion Sostenible del Agua: Reutilización, Tratamiento y Evaluación de la Calidad, Medellin, Colombia.