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Department of Biology

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The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Achenbach, L. (2012). Differences in Salinity Tolerance of fifteen genotypes of Phragmites australis. Poster session presented at Symposium of Aquatic Plants, Poznan, Poland.

Möllers, J. (2014). Heat kernel analysis for Bessel operators on symmetric cones. Journal of Lie Theory, 24(2), 373-396. http://www.heldermann.de/JLT/JLT24/JLT242/jlt24016.htm

Möllers, J. (2013). A geometric quantization of the Kostant-Sekiguchi correpondence for scalar type unitary highest weight representations. Documenta Mathematica, 18, 785-855. http://www.math.uiuc.edu/documenta/vol-18/26.html

Hilgert, J., Kobayashi, T., Möllers, J. & Ørsted, B. (2012). Fock model and Segal-Bargmann transform for minimal representations of Hermitian Lie groups. Journal of Functional Analysis, 263(11), 3492–3563. https://doi.org/10.1016/j.jfa.2012.08.026

Ho, Y.-P., Chen, H. H., Leong, K. W., Wang, T.-H. & Ho, M. Y.-P. (2006). Evaluating the intracellular stability and unpacking of DNA nanocomplexes by quantum dots-FRET. Journal of Controlled Release, 116(1), 83-9. https://doi.org/10.1016/j.jconrel.2006.09.005

Grigsby, C. L., Ho, Y.-P. & Leong, K. W. (2012). Understanding nonviral nucleic acid delivery with quantum dot-FRET nanosensors. Nanomedicine, 7(4), 565-77. https://doi.org/10.2217/nnm.12.28

Yeh, H.-C., Ho, Y.-P., Shih, I.-M. & Wang, T.-H. (2006). Homogeneous point mutation detection by quantum dot-mediated two-color fluorescence coincidence analysis. Nucleic Acids Research, 34(5), e35. https://doi.org/10.1093/nar/gkl021

Yeh, H.-C., Puleo, C. M., Lim, T. C., Ho, Y.-P., Giza, P. E., Huang, R. C. C. & Wang, T.-H. (2006). A microfluidic-FCS platform for investigation on the dissociation of Sp1-DNA complex by doxorubicin. Nucleic Acids Research, 34(21), e144. https://doi.org/10.1093/nar/gkl787

Wu, Y., Ho, Y.-P., Mao, Y., Wang, X., Yu, B., Leong, K. W. & Lee, L. J. (2011). Uptake and intracellular fate of multifunctional nanoparticles: a comparison between lipoplexes and polyplexes via quantum dot mediated Förster resonance energy transfer. Molecular Pharmaceutics, 8(5), 1662-8. https://doi.org/10.1021/mp100466m

Ho, Y.-P., Grigsby, C. L., Zhao, F. & Leong, K. W. (2011). Tuning Physical Properties of Nanocomplexes through Microfluidics-Assisted Confinement. Nano Letters, 11(5), 2178-82. https://doi.org/10.1021/nl200862n

Juul, S., Ho, Y.-P., Stougaard, M., Koch, J., Andersen, F. F., Leong, K. W. & Knudsen, B. R. (2011). Microfluidics-mediated isothermal detection of enzyme activity at the single molecule level. Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), 2011, 3258-3261. https://doi.org/10.1109/IEMBS.2011.6090885

Lassen, L. B., Gonzalez, B. B., Schmitz, A., Füchtbauer, A. C., Pedersen, F. S. & Füchtbauer, E.-M. (2012). Nras Overexpression Results in Granulocytosis, T-Cell Expansion and Early Lethality in Mice. PLoS One, 7(8), 1-11. https://doi.org/10.1371/journal.pone.0042216

Molina, V., Fernández, C., Levipan, H., Ulloa, O., Dalsgaard, T., Thamdrup, B. & Revsbech, N. P. (2012). Natural ammonium oxidizer´s response to chemical changes in the permanent and seasonal oxygen minimum zones of Chile. Poster session presented at 14th International Symposium on Microbial Ecology, København, Denmark.

Schmidt, N. M., Ims, R. A., Høye, T. T., Gilg, O., Hansen, L. H., Hansen, J., Lund, C. M., Fuglei, E., Forchhammer, M. C. & Sittler, B. (2012). Response of an arctic predator guild to collapsing lemming cycles. Proceedings of the Royal Society B: Biological Sciences, 279, 4417-4422. https://doi.org/10.1098/rspb.2012.1490

Kragh, H. (2012, Sept 10). Testability and epistemic shifts in modern cosmology. http://philsci-archive.pitt.edu/id/eprint/9294

Jørgensen, M. R. V., Schmøkel, M. S., Svendsen, H., Scheins, S., Clausen, H. F., Overgaard, J., Chen, Y.-S. & Iversen, B. B. (2012). Recent CMC Projects at ChemMatCARS. Poster session presented at National Science Foundation Site Visit at ChemMatCARS (US), Chicago, United States.

Garrido, E., Jensen, A. S., Fedorov, D. V. & Johansen, J. S. (2012). Three-body properties of low-lying ¹²Be resonances. Physical Review C (Nuclear Physics), 86(2), 024310. https://doi.org/10.1103/PhysRevC.86.024310

Hansen, M. M. (2012). Er snæbelen en helt eller en skurk? Sportsfiskeren, (04), 6.

Hayashi, Y., Miclaus, T., Engelmann, P., Autrup, H., Scott-Fordsmand, J. J. & Sutherland, D. S. (2012). Of Worms and Men: Inflammatory and acute phase responses to nanosilver.

Byskov, K., Jensen, N., Kongsfelt, I. B., Wielsøe, M., Pedersen, L. E., Haldrup, C. & Pedersen, L. (2012). Regulation of cell proliferation and cell density by the inorganic phosphate transporter PiT1. Cell Division, 7, 7. https://doi.org/10.1186/1747-1028-7-7

Lundorf, M. D., Pedersen, F. S., O'Hara, B. & Pedersen, L. (1998). Single Amino Acid Insertion in Loop 4 Confers Amphotropic Murine Leukemia Virus Receptor Function upon Murine Pit1. Journal of Virology, 75(5), 4524-4527. http://jvi.asm.org/content/72/5/4524.abstract

Uckert, W., Willimsky, G., Pedersen, F. S., Blankenstein, T. & Pedersen, L. (1998). RNA levels of human retrovirus receptors Pit1 and Pit2 do not correlate with infectibility by three retroviral vector pseudotypes. Human Gene Therapy, 9(17), 2619-2627. https://doi.org/10.1089/hum.1998.9.17-2619

Lundorf, M., Pedersen, F. S., O'Hara, B. & Pedersen, L. (1999). Amphotropic murine leukemia virus entry is determined by specific combinations of residues from receptor loops 2 and 4. Journal of Virology, 73(4), 3169-3175. http://jvi.asm.org/content/73/4/3169.abstract

Pedersen, L., van Zeijl, M., Johann, S. V. & O'Hara, B. (1997). Fungal phosphate transporter serves as a receptor backbone for gibbon ape leukemia virus. Journal of Virology, 71(10), 7619-7622. http://jvi.asm.org/content/71/10/7619.abstract

Østergaard, M., Pedersen, L., Schmidt, J., Luz, A., Lovmand, J., Erfle, V. & Pedersen, F. S. (1997). Mapping of a major osteomagenic determinant of murine leukemia virus RFB-14 to non-long terminal repeat sequences. Journal of Virology, 71(1), 645-649. http://jvi.asm.org/content/71/1/645.abstract

Pedersen, L., Johann, S. V., van Zeijl, M., Pedersen, F. S. & O'Hara, B. (1995). Chimeras of receptors for gibbon ape leukemia virus/feline leukemia virus B and amphotropic murine leukemia virus reveal different modes of receptor recognition by retrovirus. Journal of Virology, 69(4), 2401-2405. http://jvi.asm.org/content/69/4/2401.abstract?sid=d8892004-18ab-4ee9-8290-21c38d649704

Pedersen, L., Behnisch, W., Schmidt, J., Luz, A., Pedersen, F. S., Erfle, V. & Strauss, P. G. (1992). Molecular cloning of osteoma-inducing replication-competent murine leukemia viruses from the RFB osteoma virus stock. Journal of Virology, 66(10), 6186-6190. http://jvi.asm.org/content/66/10/6186.abstract

Strauss, P. G., Schmidt, J., Pedersen, L. & Erfle, V. (1988). Amplification of endogenous proviral MuLV sequences in radiation-induced osteosarcomas. International Journal of Cancer, 41(4), 616-621. https://doi.org/10.1002/ijc.2910410423

Schmidt, J., Krump-Konvalinkova, V., Luz, A., Goralczyk, R., Snell, G., Wendel, S., Dorn, S., Pedersen, L., Strauss, P. G. & Erfle, V. (1995). Akv murine leukemia virus enhances bone tumorigenesis in hMT-c-fos-LTR transgenic mice. Virology, 206(1), 85-92. https://doi.org/10.1016/S0042-6822(95)80022-0

Clausen, K. K. (2012). Citizen science - moderne videnskab. Aktuel Naturvidenskab, (4), 38-39. http://infolink2003.elbo.dk/Naturvidenskab/dokumenter/doc/8984.pdf

Özkan, K., Svenning, J.-C. & Jeppesen, E. (2013). Environmental species sorting dominates forest-bird community assembly across scales. Journal of Animal Ecology, 82(1), 266-274. https://doi.org/10.1111/j.1365-2656.2012.02019.x

Hahn, U. (2012). A Studentized Permutation Test for the Comparison of Spatial Point Patterns. Journal of the American Statistical Association, 107(498), 754-764. https://doi.org/10.1080/01621459.2012.688463

Verdezoto, N. & Grönvall, E. (2012). Opportunities to Support Medication Intake across Boundaries of Care. Paper presented at Designing for Self-Care Acknowledging the Home-Clinic Difference, Copenhagen, Denmark. http://users-cs.au.dk/gronvall/nordichi_rehab2012/accepted.html

Clausen, P., Clausen, K. K., Fox, A. D., Pihl, S. & Vissing, M. S. (2012). East Atlantic Light-bellied Brent Goose Population falls below 6,000 birds. Goose News, 11, 5-6. http://monitoring.wwt.org.uk/pdf/GooseNews11.pdf

Tran, T. T. & Skibsted, J. (2012). Structural environments of fluoride ions in C-S-H phases of Portland cement from 19F and 29Si MAS NMR spectroscopy. Paper presented at 18th IBAUSIL, Weimar, Germany.

Skibsted, J., Sevelsted, T. F., Poulsen, S. L. & Tran, T. T. (2012). Degree of reaction and guest-ion incorporation in Portland cement, SCM mixtures studied by solid-state NMR spectroscopy. Paper presented at 18th IBAUSIL, Weimar, Germany.

Bertelsen, K., Dorosz, J., Hansen, S. K., Nielsen, N. C. & Vosegaard, T. (2012). Mechanisms of Peptide-Induced Pore Formation in Lipid Bilayers Investigated by Oriented 31P Solid-State NMR Spectroscopy. PLoS One, 7(10). https://doi.org/10.1371/journal.pone.0047745

Foldbjerg, R., Beer, C., Wang, J., Sutherland, D. S. & Autrup, H. (2012). Cellular effects and gene expression after exposure to amorphous silica nanoparticles in vitro. Poster session presented at Nanotoxicology 2012, Beijing, China.

Li, S., Li, R., Li, H., Lu, J., Li, Y., Bolund, L., Schierup, M. H. & Wang, J. (2013). SOAPindel: efficient identiﬁcation of indels from short paired reads. Genome Research, 23(1), 195-200. https://doi.org/10.1101/gr.132480.111

Li, R., Zhu, H., Ruan, J., Qian, W., Fang, X., Shi, Z., Li, Y., Li, S., Shan, G., Kristiansen, K., Li, S., Yang, H., Wang, J. & Wang, J. (2010). De novo assembly of human genomes with massively parallel short read sequencing. Genome Research, 20(2), 265-72. https://doi.org/10.1101/gr.097261.109

Qin, J., Li, R., Raes, J., Arumugam, M., Burgdorf, K. S., Manichanh, C., Nielsen, T., Pons, N., Levenez, F., Yamada, T., Mende, D. R., Li, J., Xu, J., Li, S., Li, D., Cao, J., Wang, B., Liang, H., Zheng, H. ... MetaHIT Consortium (2010). A human gut microbial gene catalogue established by metagenomic sequencing. Nature, 464(7285), 59-65. https://doi.org/10.1038/nature08821

Wang, J., Zhang, J., Li, R., Zheng, H., Li, J., Zhang, Y., Li, H., Ni, P., Li, S., Li, S., Wang, J., Liu, D., McDermott, J., Samudrala, R., Liu, S., Wang, J., Yang, H., Yu, J. & Wong, G. K.-S. (2010). Evolutionary transients in the rice transcriptome. Genomics Proteomics & Bioinformatics, 8(4), 211-28. https://doi.org/10.1016/S1672-0229(10)60023-X

Pearce, C., Reynisson, N. F., Massé, G., Kristiansen, S. M., Kuijpers, A. & Seidenkrantz, M.-S. (2012). Rapid oceanic changes at the Younger Dryas termination inferred from diatom analysis offshore Newfoundland. Abstract from International Diatom Symposium, Ghent, Belgium.

Sandal, N., Jin, H., Rodriguez-Navarro, D. N., Temprano, F., Cvitanich, C., Brachmann, A., Sato, S., Kawaguchi, M., Tabata, S., Parniske, M., Ruiz-Sainz, J. E., Andersen, S. U. & Stougaard, J. (2012). A Set of Lotus japonicus Gifu x Lotus burttii Recombinant Inbred Lines Facilitates Map-based Cloning and QTL Mapping. D N A Research, 19(4), 317-323. https://doi.org/10.1093/dnares/dss014

Liao, J., Singh, S., Hossain, M. S., Andersen, S. U., Ross, L., Bonetta, D., Zhou, Y., Sato, S., Tabata, S., Stougaard, J., Szczyglowski, K. & Parniske, M. (2012). Negative regulation of CCaMK is essential for symbiotic infection. Plant Journal, 72(4), 572-584. https://doi.org/10.1111/j.1365-313X.2012.05098.x

Gupta, V., Markmann, K., Pedersen, C. N. S., Stougaard, J. & Andersen, S. U. (2012). shortran: A pipeline for small RNA-seq data analysis. Bioinformatics, 28(20), 2698-2700. https://doi.org/10.1093/bioinformatics/bts496

Jensen, K.-M. V., Brøchner Jespersen, J., Overgaard Nielsen, B., Bresciani, J., Sommer, C. & Achim Nielsen, S. (1999). Fluer og myg i husdyrbruget: Kvægmyg. Dansk Veterinærtidsskrift, 82(8), 348-350.

Madsen, M., Nansen, P., Jespersen, J. B., Jensen, K.-M. V., Holter, P. & Nielsen, B. O. (1988). The influence of Ivermectin treatment of cattle on dung fauna and dung composition. In Abstracts of the Vth European Multicolloqui¬um of Parasitology, (pp. 95).

C. Tichy, M., Mølmer, K. & F. Sherson, J. (2012). Shaking the entropy out of a lattice: atomic filtering by vibrational excitations. Physical Review A, 86(3), 033618. https://doi.org/10.1103/PhysRevA.86.033618

Toftdal, C. N. (2012). Fødekæderne ændrer sig dramatisk i Arktis. Aarhus Stiftstidende.

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Anne Kirstine Mehlsen