Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Orcutt, B. N., Wheat, C. G., Rouxel, O., Hulme, S., Edwards, K. & Bach, W. (2013). Oxygen consumption rates in subseafloor basaltic crust derived from a reaction transport model. Nature Communications, 4, Article 2539. https://doi.org/10.1038/ncomms3539

Rodenas, P. A., Sánchez-Fernández, D., Picazo, F., Millán, A., Lobo, J. M. & Ribera, I. (2013). Preserving the evolutionary history of freshwater biota in Iberian National Parks. Biological Conservation, 162, 116-126. https://doi.org/10.1016/j.biocon.2013.04.001

Projecto-Garcia, J., Natarajan, C., Moriyama, H., Weber, R. E., Fago, A., Cheviron, Z. A., Dudley, R., McGuire, J. A., Witt, C. C. & Storz, J. F. (2013). Repeated elevational transitions in hemoglobin function during the evolution of Andean hummingbirds. Proceedings of the National Academy of Sciences (PNAS), 110(51), 20669-20674. https://doi.org/10.1073/pnas.1315456110

Sandom, C. J., Hughes, J. & Macdonald, D. W. (2013). Rewilding the scottish highlands: Do wild boar, sus scrofa, use a suitable foraging strategy to be effective ecosystem engineers? Restoration Ecology, 21(3), 336-343. https://doi.org/10.1111/j.1526-100X.2012.00903.x

Sandom, C. J., Hughes, J. & Macdonald, D. W. (2013). Rooting for rewilding: Quantifying wild boar's sus scrofa rooting rate in the scottish highlands. Restoration Ecology, 21(3), 329-335. https://doi.org/10.1111/j.1526-100X.2012.00904.x

Wheat, C. G., Hulme, S. M., Fisher, A. T., Orcutt, B. N. & Becker, K. (2013). Seawater recharge into oceanic crust: IODP Exp 327 Site U1363 Grizzly Bare outcrop. Geochemistry, Geophysics, Geosystems, 14(6), 1957-1972. https://doi.org/10.1002/ggge.20131

Maeck, A., Delsontro, T., McGinnis, D. F., Fischer, H., Flury, S., Schmidt, M., Fietzek, P. & Lorke, A. (2013). Sediment trapping by dams creates methane emission hot spots. Environmental Science & Technology, 47(15), 8130-8137. https://doi.org/10.1021/es4003907

Kaartokallio, H., Søgaard, D. H., Norman, L., Rysgaard, S., Tison, J.-L., Delille, B. & Thomas, D. (2013). Short-term variability in bacterial abundance, cell properties, and incorporation of leucine and thymidine in subarctic sea ice. Aquatic Microbial Ecology, 71(1), 57-73. https://doi.org/10.3354/ame01667

Vedel-Sørensen, M., Tovaranonte, J., Bøcher, P. K., Balslev, H. & Barfod, A. S. (2013). Spatial distribution and environmental preferences of 10 economically important forest palms in western South America. Forest Ecology and Management, 307, 284-292. https://doi.org/10.1016/j.foreco.2013.07.005

Zachos, F. E., Apollonio, M., Bärmann, E. V., Festa-Bianchet, M., Göhlich, U., Habel, J. C., Haring, E., Kruckenhauser, L., Lovari, S., McDevitt, A. D., Pertoldi, C., Rössner, G. E., Sánchez-Villagra, M. R., Scandura, M. & Suchentrunk, F. (2013). Species inflation and taxonomic artefacts-A critical comment on recent trends in mammalian classification. Mammalian Biology, 78(1), 1-6. https://doi.org/10.1016/j.mambio.2012.07.083

Rasmussen, C. (2013). Stingless bees (Hymenoptera Apidae: Meliponini) of the Indian subcontinent: Diversity, taxonomy and current status of knowledge. Zootaxa, 3647(3), 401-428. https://doi.org/10.11646/zootaxa.3647.3.1

Arge, L. & Thorup, M. (2013). RAM-Efficient External Memory Sorting. In L. Cai, S.-W. Cheng & T.-W. Lam (Eds.), Algorithms and Computation: 24th International Symposium, ISAAC 2013, Hong Kong, China, December 16-18, 2013, Proceedings (pp. 491-501 ). Springer VS. https://doi.org/10.1007/978-3-642-45030-3_46

Rasmussen, C., Dupont, Y. L., Mosbacher, J. B., Nielsen, K. T. & Olesen, J. M. (2013). Strong impact of temporal resolution on the structure of an ecological network. PLoS One, 8(12), e81694. https://doi.org/10.1371/journal.pone.0081694

Aebersold, R., Bader, G. D., Edwards, A. M., van Eyk, J. E., Kussmann, M., Qin, J. & Omenn, G. S. (2013). The biology/disease-driven human proteome project (B/D-HPP): enabling protein research for the life sciences community. Journal of Proteome Research, 12(1), 23-27. https://doi.org/10.1021/pr301151m

Brodal, G. S. (2013). A Survey on Priority Queues. In A. Brodnik, A. López-Ortiz, V. Raman & A. Viola (Eds.), Space-Efficient Data Structures, Streams, and Algorithms: Papers in Honor of J. Ian Munro on the Occasion of His 66th Birthday (pp. 150-163 ). Springer VS. https://doi.org/10.1007/978-3-642-40273-9_11

Nemésio, A., Seixas, D. P. & Rasmussen, C. (2013). Trigona pallens (Fabricius, 1798) (Hymenoptera Apidae) strongly attracted to vanillin in northeastern Peru. Brazilian Journal of Biology, 73(3), 677-678.

Pellissier, L., Ndiribe, C., Dubuis, A., Pradervand, J.-N., Salamin, N., Guisan, A. & Rasmann, S. (2013). Turnover of plant lineages shapes herbivore phylogenetic beta diversity along ecological gradients. Ecology Letters, 16(5), 600-608. https://doi.org/10.1111/ele.12083

Brodal, G. S. & Larsen, K. G. (2014). Optimal Planar Orthogonal Skyline Counting Queries. In R. Ravi & I. L. Gørtz (Eds.), Algorithm Theory – SWAT 2014: 14th Scandinavian Symposium and Workshops, Denmark. Proceedings (pp. 110-121). Springer VS. https://doi.org/10.1007/978-3-319-08404-6_10

Frederiksen, S. K. S. & Miltersen, P. B. (2013). Approximating the Value of a Concurrent Reachability Game in the Polynomial Time Hierarchy. In L. Cai, S.-W. Cheng & T.-W. Lam (Eds.), Algorithms and Computation: 24th International Symposium, ISAAC 2013, Hong Kong, China, December 16-18, 2013, Proceedings (pp. 457-467 ). Springer VS. https://doi.org/10.1007/978-3-642-45030-3_43

Levi, P. S., Tank, J. L., Rüegg, J., Janetski, D. J., Tiegs, S. D., Chaloner, D. T. & Lamberti, G. A. (2013). Whole-Stream Metabolism Responds to Spawning Pacific Salmon in Their Native and Introduced Ranges. Ecosystems, 16(2), 269-283. https://doi.org/10.1007/s10021-012-9613-4

Boesen, T. & Nielsen, L. P. (2013). Molecular dissection of bacterial nanowires. mBio (Online), 4(3), e00270-13. https://doi.org/10.1128/mBio.00270-13

Hansen, K. A. & Podolskii, V. V. (2013). Polynomial threshold functions and Boolean threshold circuits. In K. Chatterjee & J. Sgall (Eds.), Mathematical Foundations of Computer Science 2013: 38th International Symposium, MFCS 2013, Klosterneuburg, Austria, August 26-30, 2013. Proceedings (pp. 516-527 ). Springer VS. https://doi.org/10.1007/978-3-642-40313-2_46

Filos-Ratsika, A. & Miltersen, P. B. (2013). Truthful approximations to range voting. (1307.1766v1 ed.) arxiv.org. http://arxiv.org/pdf/1307.1766v1.pdf

Cohen, G., Damgård, I. B., Ishai, Y., Kölker, J., Miltersen, P. B., Raz, R. & Rothblum, R. (2013). Efficient Multiparty Protocols via Log-Depth Threshold Formulae Contact Add Comment RSS-Feed. Electronic Colloquium on Computational Complexity, (TR13-107). http://eccc.hpi-web.de/report/2013/107/

Wiberg-Larsen, P., Baattrup-Pedersen, A., Kristensen, E. A., Hansen, R. R. & Kronvang, B. (2013). Skjernåens smådyr og planter - lykkedes restaureringen? Vand & Jord, 20(3), 95-98.

Weber, R. E. (2013). Hemoglobins: models of physiological adaptation, with special reference to O2 availability and temperature.. Abstract from Italian Physiological Society (SIF) & European Society of Comparative Physiology and Biochemistry (ESCPB) Conference, Denmark.

Jensen, C. S., Jermaine, C. & Zhou, X. (Eds.) (2013). Proceedings of the 29th IEEE International Conference on Data Engineering, (ICDE). IEEE. http://ieeexplore.ieee.org.ez.statsbiblioteket.dk:2048/xpl/mostRecentIssue.jsp?punumber=6530811

Moreira, J. M. M., Jensen, C. S., Dias, P. & Mesquita, P. (2013). Creating data representations for moving objects with extent from images. In Presented at the COST MOVE Workshop at Moving Objects at Sea, Brest, France, June 28–29, 2013

Atzeni, P., Jensen, C. S. ., Orsi, G., Ram, S., Tanca, L. Z. I. & Torlone, R. (2013). The relational model is dead, SQL is dead, and i don't feel so good myself. SIGMOD Record, 42(2), 64-68. https://doi.org/10.1145/2503792.2503808

Ciliberto, S., Imparato, A., Naert, A. & Tanase, M. (2013). Statistical properties of the energy exchanged between two heat baths coupled by thermal fluctuations. Journal of Statistical Mechanics: Theory and Experiment, 2013(12), 12014. https://doi.org/10.1088/1742-5468/2013/12/P12014

Proszek, J., Roy, A., Jakobsen, A.-K., Hougaard, R. F., Knudsen, B. R. & Stougaard, M. (2014). Topoisomerase I as a Biomarker: Detection of Activity at the Single Molecule Level. Sensors, 14(1), 1195-1207. https://doi.org/10.3390/s140101195

Olesen, B., Krause-Jensen, D., Marbà, N. & Christensen, P. B. (2015). Eelgrass (Zostera Marina L.) in subarctic Greenland: Dense meadows with slow biomass turnover in cold waters. Marine Ecology Progress Series, 518, 107-121. https://doi.org/10.3354/meps11087

Merkel, F. R. (2013). Rådgivning om lomvier fordrejes i debatten. Sermitsiaq, 2013(51), 36.

Boström, C., Baden, S., Bockelmann, A.-C., Dromph, K. M., Frederiksen, S., Gustafsson, C., Krause-Jensen, D., Möller, T., Nielsen, S. L., Olesen, B., Olsen, J., Pihl, L. & Rinde, E. (2014). Distribution, structure and function of Nordic seagrass ecosystems: Implications for coastal management and conservation. Aquatic Conservation, 24(3), 410-434. https://doi.org/10.1002/aqc.2424

Clausen, K. K., Krause-Jensen, D., Olesen, B. & Marbà, N. (2014). Seasonality of eelgrass biomass across gradients in temperature and latitude. Marine Ecology Progress Series, 506, 71-85. https://doi.org/10.3354/meps10800

Juul-Pedersen, T., Arendt, K. E., Mortensen, J., Rysgaard, S., Søgaard, D. H., Retzel, A., Nygaard, R., Burmeister, A., Sejr, M. K., Blicher, M. E., Krause-Jensen, D., Marbà, N., Merzouk, A., Labasen, A. L., Geertz-Hansen, O., Boye, T. K. & Simon, M. (2013). Nuuk Basic: The MarineBasis programme. In L. M. Jensen & M. Rasch (Eds.), Nuuk Ecological Research Operations: 6th Annual Report 2012 (pp. 47-67). Aarhus University, DCE - Danish Centre for Environment and Energy. http://dce.au.dk/fileadmin/dce.au.dk/Udgivelser/Oevrige_udgivelser/NERO_2013.pdf

Rasmussen, I., Blicher, M. E., Juul-Pedersen, T., Sejr, M. K. & Middelboe, M. (2013). Role of bacteria in pelagic carbon turnover in low Arctic Godthåbsfjord, Greenland. In L. M. Jensen & M. Rasch (Eds.), Nuuk Ecological Research Operations: 6th Annual Report 2012 (pp. 77-78). Aarhus University, DCE - Danish Centre for Environment and Energy. http://dce.au.dk/fileadmin/dce.au.dk/Udgivelser/Oevrige_udgivelser/NERO_2013.pdf

Nielsen, S. B. & Wyer, J. (2013). General Concepts. In S. B. Nielsen & J. A. Wyer (Eds.), Photophysics of Ionic Biochromophores (pp. 1-10). Springer. https://doi.org/10.1007/978-3-642-40190-9_1

Ntini, E., Järvelin, A. I., Bornholdt, J., Chen, Y., Boyd, M., Jørgensen, M., Andersson, R., Hoof, I., Schein, A., Andersen, P. R., Andersen, P. K., Preker, P., Valen, E., Zhao, X., Pelechano, V., Steinmetz, L. M., Sandelin, A. G. & Jensen, T. H. (2013). Polyadenylation site-induced decay of upstream transcripts enforces promoter directionality. Nature Structural and Molecular Biology, 20(8), 923-928. https://doi.org/10.1038/nsmb.2640

Nielsen, S. B. (2013). Introduction and New Aspects. In S. B. Nielsen & J. A. Wyer (Eds.), Photophysics of Ionic Biochromophores (pp. 11-19). Springer. https://doi.org/10.1007/978-3-642-40190-9_2

Wyer, J. (2013). Experimental Techniques. In S. B. Nielsen & J. A. Wyer (Eds.), Photophysics of Ionic Biochromophores (pp. 21-44). Springer. https://doi.org/10.1007/978-3-642-40190-9_3

Nielsen, S. B. (2013). Fluorescence from Gas-Phase Biomolecular Ions. In S. B. Nielsen & J. A. Wyer (Eds.), Photophysics of Ionic Biochromophores (pp. 105-116). Springer. https://doi.org/10.1007/978-3-642-40190-9_6

Andersen, P. R., Domanski, M., Kristiansen, M. S., Storvall, H., Ntini, E., Verheggen, C., Schein, A., Bunkenborg, J., Poser, I., Hallais, M., Sandberg, R., Hyman, A., Lacava, J., Rout, M. P., Andersen, J. S., Bertrand, E. & Jensen, T. H. (2013). The human cap-binding complex is functionally connected to the nuclear RNA exosome. Nature Structural and Molecular Biology, 20(12), 1367-1376. https://doi.org/10.1038/nsmb.2703

Wyer, J. & Nielsen, S. B. (2013). Spectroscopy of Ferric Heme and Protoporphyrin IX Ions In Vacuo. In S. B. Nielsen & J. A. Wyer (Eds.), Photophysics of Ionic Biochromophores (pp. 117-139). Springer. https://doi.org/10.1007/978-3-642-40190-9_7

Hallais, M., Pontvianne, F., Andersen, P. R., Clerici, M., Lener, D., Benbahouche, N. E. H., Gostan, T., Vandermoere, F., Robert, M.-C., Cusack, S., Verheggen, C., Jensen, T. H. & Bertrand, E. (2013). CBC-ARS2 stimulates 3'-end maturation of multiple RNA families and favors cap-proximal processing. Nature Structural and Molecular Biology, 20(12), 1358-1366. https://doi.org/10.1038/nsmb.2720

Mathias Weber, J., Marcum, J. & Nielsen, S. B. (2013). UV Photophysics of DNA and RNA Nucleotides In Vacuo: Dissociation Channels, Time Scales, and Electronic Spectra. In S. B. Nielsen & J. A. Wyer (Eds.), Photophysics of Ionic Biochromophores (pp. 181-207). Springer. https://doi.org/10.1007/978-3-642-40190-9_10

Nielsen, S. B. & Wyer, J. (2013). Photophysics of Ionic Biochromophores. Springer. Physical Chemistry in Action https://doi.org/10.1007/978-3-642-40190-9

Olsen, J. E., Frommen, C., Jensen, T. R., Riktor, M. D., Sørby, M. H. & Hauback, B. C. (2014). Structure and thermal properties of composites with RE-borohydrides (RE = La, Ce, Pr, Nd, Sm, Eu, Gd, Tb, Er, Yb or Lu) and LiBH₄. R S C Advances, 4(4), 1570-1582. https://doi.org/10.1039/c3ra44012e

Grove, H., Rude, L. H., Jensen, T. R., Corno, M., Ugliengo, P., Baricco, M., Sørby, M. H. & Hauback, B. C. (2014). Halide substitution in Ca(BH₄)₂. R S C Advances, 4(9), 4736-4742. https://doi.org/10.1039/c3ra46226a

Josse, C., Young, B., Lyons-Smyth, R., Brooks, T., Frances, A., Comer, P., Petry, P., Balslev, H., Bassuner, B., Goettsch, B., Hak, J., Jørgensen, P., larea-Alcázar, D., Navarro, G., Saatchi, S., Sanchez de Lozada, A., Svenning, J.-C., Tovar, L. A. & Moscoso, A. (2013). Desarrollo de insumos para la toma de decisiones de conservación en la cuenca amazónica occidental. Ecologia Aplicada, 12(1), 45-65.

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