Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Birkedal, L., Jaber, G., Sieczkowski, F. & Thamsborg, J. (2016). A Kripke logical relation for effect-based program transformations. Information and Computation, 249, 160-189. https://doi.org/10.1016/j.ic.2016.04.003

Mateo, R. G., Broennimann, O., Normand, S., Petitpierre, B., Araujo, M. B., Svenning, J.-C., Baselga, A., Fernandez-Gonzalez, F., Gomez-Rubio, V., Munoz, J., Suarez, G. M., Luoto, M., Guisan, A. & Vanderpoorten, A. (2016). The mossy north: an inverse latitudinal diversity gradient in European bryophytes. Scientific Reports, 6, Article 25546. https://doi.org/10.1038/srep25546

Zurell, D., Thuiller, W., Pagel, J., Cabral, J. S., Munkemuller, T., Gravel, D., Dullinger, S., Normand, S., Schiffers, K. H., Moore, K. A. & Zimmermann, N. E. (2016). Benchmarking novel approaches for modelling speciesrange dynamics. Global Change Biology, 22(8), 2651-2664. https://doi.org/10.1111/gcb.13251

Birkedal, L. (2016). Preface. Electronic Notes in Theoretical Computer Science, 325, 1-2. https://doi.org/10.1016/j.entcs.2016.09.028

Ohlemueller, R., Huntley, B., Normand, S. & Svenning, J.-C. (2012). Potential source and sink locations for climate-driven species range shifts in Europe since the Last Glacial Maximum. Global Ecology and Biogeography, 21(2), 152-163. https://doi.org/10.1111/j.1466-8238.2011.00674.x

Thorbjørnsen, S., Hasebe, T. & Sakuma, N. (2017). The normal distribution is freely selfdecomposable. International Mathematics Research Notices, 1-22.

Davis, M. (2017). What North America's skeleton crew of megafauna tells us about community disassembly. Proceedings of the Royal Society B: Biological Sciences, 284(1846), Article 20162116. https://doi.org/10.1098/rspb.2016.2116

Haagh, H., Ji, Y., Li, C., Orlandi, C. & Song, Y. (2016). Revealing Encryption for Partial Ordering. http://eprint.iacr.org/2016/972.pdf

Sandel, B. S., Monnet, A.-C., Govaerts, R. & Vorontsova, M. (2017). Late Quaternary climate stability and the origins and future of global grass endemism. Annals of Botany, 119(2), 279-288. https://doi.org/10.1093/aob/mcw178

Alexander, C., Arge, L., Bøcher, P. K., Revsbæk, M., Sandel, B., Svenning, J. C., Tsirogiannis, C. & Yang, J. (2016). Computing river floods using massive terrain data. In J. A. Miller, D. O'Sullivan & N. Wiegand (Eds.), Geographic Information Science: 9th International Conference, GIScience 2016 (Vol. 9927, pp. 3-17). Springer VS. https://doi.org/10.1007/978-3-319-45738-3_1

Balling, N., Poulsen, S. E., Fuchs, S., Mathiesen, A., Bording, T. S., Nielsen, S. B. & Nielsen, L. H. (2016). Development of a numerical 3D geothermal model for Denmark. In European Geothermal Congress, Strasbourg, 2016 Article 303

Balling, N. (2016). The lithosphere across the Northern Tornquist Zone - Southwestern edge of Baltic Shield. Geophysical Research Abstracts, 18. http://meetingorganizer.copernicus.org/EGU2016/EGU2016-9461-1.pdf

Møller, I., Balling, N., Rasmussen, P. & Ditlefsen, C. (2016). Regional shallow heat flow in Denmark from borehole temperatures and thermal conductivities of main lithologies. In European Geothermal Congress, Strasbourg, 2016 EGEC. http://europeangeothermalcongress.eu/wp-content/uploads/2016/10/proceedings.pdf

Loffler, M., Nollenburg, M. & Staals, F. (2016). Mixed map labeling. Journal of Spatial Information Science, 13, 3-32. https://doi.org/10.5311/JOSIS.2016.13.264

Gholampour, A., Sheshmani, A. & Yau, S.-T. (2017). Localized Donaldson-Thomas theory of surfaces. https://arxiv.org/abs/1701.08902

Gholampour, A., Sheshmani, A. & Yau, S.-T. (2017). Nested Hilbert schemes on surfaces: Virtual fundamental class. arxiv.org. https://arxiv.org/abs/1701.08899

Schlafer, S. & Meyer, R. L. (2017). Confocal microscopy imaging of the biofilm matrix. Journal of Microbiological Methods, 138, 50-59. https://doi.org/10.1016/j.mimet.2016.03.002

Van Goethem, A., Staals, F., Löffler, M., Dykes, J. & Speckmann, B. (2017). Multi-Granular Trend Detection for Time-Series Analysis. IEEE Transactions on Visualization and Computer Graphics, 23(1), 661-670. Article 7536203. https://doi.org/10.1109/TVCG.2016.2598619

Nam, K., Munch, K., Mailund, T., Nater, A., Greminger, M. P., Krützen, M., Marquès-Bonet, T. & Schierup, M. H. (2017). Evidence that the rate of strong selective sweeps increases with population size in the great apes. Proceedings of the National Academy of Sciences (PNAS), 114(7), 1613-1618. https://doi.org/10.1073/pnas.1605660114

van Kreveld, M., Löffler, M., Staals, F. & Wiratma, L. (2016). A Refined Definition for Groups of Moving Entities and its Computation. In S.-H. Hong (Ed.), 27th International Symposium on Algorithms and Computation (ISAAC 2016) (pp. 48.1-48.12). Dagstuhl Publishing. https://doi.org/10.4230/LIPIcs.ISAAC.2016.48

Chambers, E., Kostitsyna, I., Löffler, M. & Staals, F. (2016). Homotopy Measures for Representative Trajectories. In P. Sankowski & C. Zaroliagis (Eds.), 24th Annual European Symposium on Algorithms, ESA 2016 (Vol. 57, pp. 27:1-27:17). Article 27 Dagstuhl Publishing. https://doi.org/10.4230/LIPIcs.ESA.2016.27

Van Goethem, A., Van Kreveld, M., Löffler, M., Speckmann, B. & Staals, F. (2016). Grouping time-varying data for interactive exploration. In S. Fekete & A. Lubiw (Eds.), 32nd International Symposium on Computational Geometry, SoCG 2016 (Vol. 51, pp. 61.1-61.16). Dagstuhl Publishing. https://doi.org/10.4230/LIPIcs.SoCG.2016.61

Kostitsyna, I., Löffler, M., Polishchuk, V. & Staals, F. (2016). On the complexity of minimum-link path problems. In S. Fekete & A. Lubiw (Eds.), 32nd International Symposium on Computational Geometry, SoCG 2016 (Vol. 51, pp. 49.1-49.16). Dagstuhl Publishing. https://doi.org/10.4230/LIPIcs.SoCG.2016.49

van Kreveld, M., Löffler, M., Staals, F. & Wiratma, L. (2016). A Refined Definition for Groups of Moving Entities and its Computation. Paper presented at EuroCG 2016, Lugano, Switzerland. http://www.eurocg2016.usi.ch/sites/default/files/paper_67.pdf

Löffler, M., Staals, F. & Urhausen, J. (2016). New Results on Trajectory Grouping under Geodesic Distance. Paper presented at EuroCG 2016, Lugano, Switzerland. http://www.eurocg2016.usi.ch/sites/default/files/paper_70.pdf

Solazzo, E., Bianconi, R., Hogrefe, C., Curci, G., Alyuz, U., Balzarini, A., Baró, R., Bellasio, R., bieser, J., Brandt, J., Christensen, J. H., Colette, A. C., Francis, X. V., Vivanco, G., Jiménez-Guerrero, P., Im, U., Manders-Groot, A., Nopmongcol, U., Kitwiroon, N. ... Galmarini, S. (2017). Evaluation and error apportionment of an ensemble of atmospheric chemistry transport modeling systems: multivariable temporal and spatial breakdown. Atmospheric Chemistry and Physics, 17, 3001-3054. https://doi.org/10.5194/acp-17-3001-2017

van Goethem, A., Van Kreveld, M., Löffler, M., Speckmann, B. & Staals, F. (2016). Grouping Time-varying Data for Interactive Exploration. 61.1-61.16. Paper presented at EuroCG 2016, Lugano, Switzerland. https://doi.org/10.4230/LIPIcs.SoCG.2016.61

Brandt, J., Andersen, M. S., Bønløkke, J. H., Christensen, J. H., Hansen, K. M., Hertel, O., Im, U., Jensen, S. S., Ketzel, M., Nielsen, O.-K., Plejdrup, M. S., Sigsgaard, T. & Geels, C. (2016). High-Resolution Modelling of Health Impacts and Related External Cost from Air Pollution Using the Integrated Model System EVA. 125-128. Paper presented at 35th International Technical Meeting on Air Pollution Modelling and its Application , Chania, Crete, Greece. https://doi.org/10.1007/978-3-319-24478-5_20

Im, U., Christensen, J. H., Ketzel, M., Ellermann, T., Geels, C., Hansen, K. M., Hertel, O., Nielsen, O.-K., Plejdrup, M. S. & Brandt, J. (2016). Air pollutant trends over Denmark over the last 36 years as simulated by the integrated THOR model system. Abstract from 35th International Technical Meeting on Air Pollution Modelling and its Application , Chania, Crete, Greece.

Im, U., Hansen, K. M., Geels, C., Christensen, J. H., Brandt, J., Solazzo, E., Alyuz, U., Balzarini, A., Baró, R., Bianconi, R., bieser, J., Colette, A. C., Curci, G., Farrow, A., Flemming, J., Fraser, A., Jiménez-Guerrero, P., Kitwiroon, N., Pirovano, G. ... Galmarini, S. (2016). Impact of emissions and boundary conditions on PM levels over Europe as simulated by a multi-model ensemble in frame of AQMEII3. Abstract from European Aerosol Conference, Tours, France.

Staals, F. & Tsirogiannis, C. (2017). Computing the Expected Value and Variance of Geometric Measures. In S. Fekete & V. Ramachandran (Eds.), 19th Workshop on Algorithm Engineering and Experiments 2017, ALENEX 2017 (pp. 232 - 246). Society for Industrial and Applied Mathematics. https://doi.org/10.1137/1.9781611974768.19

Im, U., Hansen, K. M., Geels, C., Christensen, J. H., Brandt, J., Hogrefe, C., Galmarini, S., Alyuz, U., Balzarini, A., Baró, R., Bellasio, R., Bianconi, R., bieser, J., Colette, A. C., Curci, G., Flemming, J., Francis, X. V., Fraser, A., Jiménez-Guerrero, P. ... Vivanco, G. (2016). Influence of boundary conditions to multi-model simulations of ozone and PM2.5 levels over Europe and North America in frame of AQMEII3. Abstract from European Geosciences Union General Assembly 2016, Vienna, Austria.

Hansen, K. M., Christensen, J. H., Im, U., Geels, C. & Brandt, J. (2016). Modelling concentrations and trends of atmospheric pollutants in the Arctic over 36 years. Abstract from 35th International Technical Meeting on Air Pollution Modelling and its Application , Chania, Crete, Greece.

Geels, C., Ellermann, T., Hertel, O., Brandt, J., Skjøth, C., Winiwater, W., Im, U., Hansen, K. M. & Christensen, J. H. (2017). Changing agricultural NH3 emissions since 1979: The impact on N deposition and health effects across Europe and the potential for further reductions in the future. Abstract from 35th International Technical Meeting on Air Pollution Modelling and its Application , Chania, Crete, Greece.

Brandt, J., Andersen, M. S., Bønløkke, J. H., Christensen, J. H., Geels, C., Hansen, K. M., Hertel, O., Im, U., Jensen, S. S., Nielsen, O.-K., Plejdrup, M. S. & Sigsgaard, T. (2016). High-resolution modelling of health impacts and related external cost from air pollution over 36 years using the integrated model system EVA. Poster session presented at European Geosciences Union General Assembly 2016, Vienna, Austria.

Tsirogiannis, C. & Sandel, B. (2016). Fast phylogenetic biodiversity computations under a non-uniform random distribution. In M. Singh (Ed.), Research in Computational Molecular Biology - 20th Annual Conference, RECOMB 2016, Proceedings (Vol. 9649, pp. 225-236). Springer VS. https://doi.org/10.1007/978-3-319-31957-5_16

UF&HEALTH Study Group (2016). Association between short-term exposure to ultrafine and fine particles and mortality in four European urban areas: have the effects changed over time?. Abstract from ISEE conference, Rome, Italy.

Hermansson, E., Juhlin, J., Massling, A., Lange, R., Glasius, M., Roldin, P., Riipinen, I., Malmborg, V. B. & Kristensson, A. (2016). Insignificant climate effect from new particle formation over polluted sea areas?. Abstract from ICOAMS, Lund, Sweden.

Iversen, L. S., Zhang, H., Hansen, A. M. K., Svendsen, S. B., Kristensen, K., Skov, H., Massling, A., Goldstein, A. H., Bilde, M. & Glasius, M. (2016). High-resolution mass spectrometric characterization of aerosols collected at Villum Research Station, Greenland during spring 2015. Abstract from NOSA 2016, Aarhus, Denmark.

Lange, R., Massling, A., Santl-Temkiv, T., Löndahl, J. & Gosewinkel, U. B. (2016). The viability state of airborne bacteria. Abstract from The Annual Congress of The Danish Microbiological Society - Copenhagen, Denmark, Copenhagen, Denmark.

Jiang, B., Qiu, P., Eikeland, E. Z., Chen, H., Song, Q., Ren, D., Zhang, T., Yang, J., Iversen, B. B., Shi, X. & Chen, L. (2017). Cu₈GeSe₆-based thermoelectric materials with an argyrodite structure. Journal of Materials Chemistry C, 5(4), 943-952. https://doi.org/10.1039/C6TC05068A

Skov, H., Bossi, R., Massling, A., Nøjgaard, J. K., Nielsen, I. E., Nguyen, Q. T., Vorkamp, K., Lange, R., Poulsen, M. B., Christensen, J. H., Hansen, K. M., Bilde, M., Glasius, M., Sørensen, S. B., Santl-Temkiv, T., Finster, K., Pilgaard, S., Sørensen, L. L., Jensen, J. K. & Liisberg, J. B. (2016). First year of research activities at Villum Research Station, Station Nord, North Greenland. Abstract from PEEX conference, Beijing, China.

Arias, C. A., Ramírez Vargas, C. A., Carvalho, P. & Brix, H. (2017). Microbial electrochemical technologies: an emerging alternative for wastewater treatment using constructed wetlands. Abstract from 11th Annual Danish Water Forum Meeting, Copenhagen, Denmark.

Carvalho, P., Arias, C. A. & Brix, H. (2017). Contaminants of emerging concern in low-tech eco-technologies: efficiency, fate and processes. Abstract from 11th Annual Danish Water Forum Meeting, Copenhagen, Denmark.

Svendsen, S. B., Lange, R., Skov, H., Christensen, J. H., Nøjgaard, J. K., Nguyen, Q. T., Glasius, M., Hansen, A. M. K., Iversen, L. S. & Massling, A. (2016). Submicrometer aerosol chemical composition at a high Arctic site: a comparison of experimentally derived and modelled results. Abstract from NOSA 2016, Aarhus, Denmark.

Palmer, M. H., Coreno, M., De Simone, M., Hoffmann, S. V., Jones, N. C., Grazioli, C., Peterson, K., Baiardi, A., Zhang, T. & Biczysko, M. (2017). A combined theoretical and experimental study of the ionic states of iodopentafluorobenzene. The Journal of Chemical Physics, 146(8), Article 084302. https://doi.org/10.1063/1.4975672

Danielsen, K. & Sørensen, H. K. (2017). Kildecentreret matematikhistorie: Herons formel. LMFK-Bladet, (1), 14-15.

Sandel, B. & Tsirogiannis, C. (2016). Species introductions and the phylogenetic and functional structure of California's grasses. Ecology, 97(2), 472-483. https://doi.org/10.1890/15-0220.1

Kalvisa, A., Tsirogiannis, C., Silamikelis, I., Skenders, G., Broka, L., Zirnitis, A., Jansone, I. & Ranka, R. (2016). MIRU-VNTR genotype diversity and indications of homoplasy in M. avium strains isolated from humans and slaughter pigs in Latvia. Infection, Genetics and Evolution, 43(September), 15-21. https://doi.org/10.1016/j.meegid.2016.05.013

Tsirogiannis, C. & Sandel, B. (2016). Fast computations for measures of phylogenetic beta diversity. PLoS One, 11(4), Article 0151167. https://doi.org/10.1371/journal.pone.0151167

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