Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Tzoumas, K., Deshpande, A. & Jensen, C. S. (2013). Efficiently adapting graphical models for selectivity estimation. V L D B Journal, 22(1), 3-27. https://doi.org/10.1007/s00778-012-0293-7

Brodal, G. S., Davoodi, P., Lewenstein, M., Raman, R. & Rao, S. S. (2012). Two Dimensional Range Minimum Queries and Fibonacci Lattices. Lecture Notes in Computer Science, 7501, 217-228 . https://doi.org/10.1007/978-3-642-33090-2_20

Brodal, G. S., Lagogiannis, G. & Tarjan, R. E. (2012). Strict fibonacci heaps. In STOC '12 Proceedings of the 44th symposium on Theory of Computing (pp. 1177-1184 ). Association for Computing Machinery. https://doi.org/10.1145/2213977.2214082

Šidlauskas, D., Šaltenis, S. & Jensen, C. S. (2012). Parallel main-memory indexing for moving-object query and update workloads. In Proceedings of the 2012 ACM SIGMOD International Conference on Management of Data (pp. 37-48 ). Association for Computing Machinery. https://doi.org/10.1145/2213836.2213842

Jensen, C. S., Thomsen, J. R. & Yiu, M. L. (2012). Effective caching of shortest paths for location-based services. In Proceedings of the 2012 ACM SIGMOD International Conference on Management of Data (pp. 313-324 ). Association for Computing Machinery. https://doi.org/10.1145/2213836.2213872

Pertoldi, C., Pellegrino, I., Cucco, M., Mucci, N., Randi, E., Laursen, J. T., Sunde, P., Loeschcke, V. & Kristensen, T. N. (2012). Genetic consequences of population decline in the Danish population of the little owl (Athene noctua). Evolutionary Ecology Research, 14(7), 921-932. http://www.evolutionary-ecology.com/

Koldsø, H., Noer, P. R., Grouleff, J., Autzen, H. E., Sinning, S. & Schiøtt, B. (2011). Unbiased simulations reveal the inward-facing conformation of the human serotonin transporter and Na⁺ ion release. PLoS Computational Biology, 7(10), e1002246. https://doi.org/10.1371/journal.pcbi.1002246

Qian, H. & Autzen, H. E. (2012). A little engine that could: ATP-powered electrical battery and heater inside cells. Biophysical Journal, 103(7), 1409-1410. https://doi.org/10.1016/j.bpj.2012.08.047

Kristensen, T. N., Overgaard, J., Hoffmann, A. A., Nielsen, N. C. & Malmendal, A. (2012). Inconsistent effects of developmental temperatureacclimation on low-temperature performance andmetabolism in Drosophila melanogaster. Evolutionary Ecology Research, 14, 821-837. http://www.evolutionary-ecology.com/

Christensen, L. L., Tobiasen, H., Holm, A., Schepeler, T., Ostenfeld, M. S., Thorsen, K., Rasmussen, M. H., Birkenkamp-Demtröder, K., Sieber, O. M., Gibbs, P., Lubinski, J., Lamy, P., Laurberg, S., Øster, B., Hansen, K. Q., Hagemann-Madsen, R., Byskov, K., Ørntoft, T. F. & Andersen, C. L. (2013). MiRNA-362-3p induces cell cycle arrest through targeting of E2F1, USF2 and PTPN1 and is associated with recurrence of colorectal cancer. International Journal of Cancer, 133(1), 67-78. https://doi.org/10.1002/ijc.28010

Therkildsen, O. R., Andersen, S. M., Clausen, P., Bregnballe, T., Laursen, K. & Teilmann, J. (2013). Vurdering af forstyrrelsestrusler i NATURA 2000-områderne. Aarhus University, DCE - Danish Centre for Environment and Energy. Videnskabelig rapport fra DCE - Nationalt Center for Miljø og Energi No. 52 http://www.dmu.dk/Pub/SR52.pdf

Nielsen, M. B. & Ingvorsen, K. (2013). Biodegradation of para-nitrophenol by Citricoccus nitrophenolicus strain PNP1^Tat high pH. Biodegradation, 24, 79-87.

Kjellsson, G., Sørensen, J. G., Strandberg, M. T. & Damgaard, C., (2012). Økologisk risikovurdering af en genmodificeret insektresistent og herbicidtolerant bomuld T304-40 i anmeldelse til godkendelse vedr. markedsføring under Forordning 1829/2003/EF: EFSA/GMO/NL/2011/97, No. DMU-35, No. 08-8346, 13 p., Jan 10, 2012.

Kjellsson, G., Damgaard, C. & Sørensen, J. G., (2012). Økologisk risikovurdering af genmodificeret dobbelt herbicidtolerant sojabønne linie FG72 i anmeldelse vedr. markedsføring under Forordning 1829/2003/EF: EFSA/GMO/BE/2011/98, No. DMU-35, No. 08-8346, 12 p., Dec 13, 2012.

Kjellsson, G., Sørensen, J. G. & Damgaard, C., (2012). Økologisk risikovurdering af en genmodificeret glyfosat-tolerant raps GT73 i anmeldelse til godkendelse vedr. import til markedsføring under forordning 1829/2003/EF: EFSA/GMO/NL/2010/87, No. DMU-35, No. 08-8346, 13 p., Feb 12, 2013.

Arunapuram, P., Edvardsson, I., Golden, M., Anderson, J. W. J., Novák, A., Sükösd, Z. & Hein, J. (2013). StatAlign 2.0: Combining statistical alignment with RNA secondary structure prediction. Bioinformatics, 29(5), 654-655. https://doi.org/10.1093/bioinformatics/btt025

Feis, M. E., Thieltges, D. W., Olsen, J. L., de Montaudouin, X., Jensen, K. T., Bazairi, H., Culloty, S. C. & Luttikhuizen, P. C. (2012). Parasite population genetic structure in relation to definitive host type. Integrative & Comparative Biology, 52(Suppl.1).

Jensen, K. T. (1992). Macrozoobenthos on an intertidal mudflat in the Danish Wadden Sea: Comparisons of surveys made in the 1930s, 1940s and 1980s. Helgoland Marine Research, 46(4), 363-376. https://doi.org/10.1007/BF02367204

Miglio, A., Chiappini, C., Morel, T., Barbieri, M., Chaplin, W. J., Girardi, L., Montalbán, J., Valentini, M., Mosser, B., Baudin, F., Casagrande, L., Fossati, L., Silva Aguirre, V. & Baglin, A. (2013). Galactic archaeology: mapping and dating stellar populations with asteroseismology of red-giant stars. Royal Astronomical Society. Monthly Notices, 429(1), 423-428. https://doi.org/10.1093/mnras/sts345

Poulsen, K. & Kilian, M. (2013). IgA1-Specific Serine Endopeptidase. In N. D. Rawlings & G. S. S. (Eds.), Handbook of Proteolytic Enzymes (3. ed., Vol. 1, pp. 3088-3092). Academic Press.

Rasmussen, J., Canal Vergés, P. & Olesen, B. (2013). Makroalger - og deres betydning for ålegræsset. Vand & Jord, 2013(1), 12-15.

Barreto, L., Perkins, E., Johannsen, J., Ulstrup, S., Fromm, F., Raidel, C., Seyller, T. & Hofmann, P. (2013). Detecting the local transport properties and the dimensionality of transport of epitaxial graphene by a multi-point probe approach. Applied Physics Letters, 102(3). https://doi.org/10.1063/1.4789508

Rasmussen, J., Krause-Jensen, D. & Olesen, B. (2010). Effects of filamentous macroalgae on growth and survival of eelgrass, Zostera marina, seedlings. Poster session presented at World seagrass conference 2010, Patong Beach, Phuket, Thailand.

Rasmussen, J., Pedersen, M. F., Olesen, B., Nielsen, S. L. & Pedersen, T. M. (2012). Temporal and spatial dynamics of ephemeral macroalgal communities in eelgrass, Zostera marina, beds. Abstract from 47th European Marine Biology Symposium, Arendal, Norway.

Rasmussen, J. & Olesen, B. (2010). Effects of algae-mat thickness on survival and growth of eelgrass (Zostera marina) seedlings. Poster session presented at Nordic Marine Science Conference, Strömstad, Sweden.

Kjellsson, G., Sørensen, J. G. & Damgaard, C., (2012). Økologisk risikovurdering af genmodificeret majs-krydsning: BT11xMIR162x1507xGA21 i anmeldelse vedr. markedsføring under Forordning 1829/2003/EF: EFSA/GMO/DE/2010/86, No. DMU-35, No. 08-8346, 15 p., Sept 12, 2012.

Andersen, H. H. (2013). The Role of Verma in Representation Theory. In R. Bhatia, C. S. Rajan & A. I. Singh (Eds.), Connected at Infinity II: A Selection of Mathematics by Indians (pp. 172-192). Hindustan Book Agency.

Karkamkar, A., Parab, K., Camaioni, D. M., Neiner, D., Cho, H., Nielsen, T. K. & Autrey, T. (2013). A thermodynamic and kinetic study of the heterolytic activation of hydrogen by frustrated borane–amine Lewis pairs. Dalton Transactions , 42(3), 615-619. https://doi.org/10.1039/c2dt31628e

Stelter, M., Gutsche, I., Kapp, U., Bazin, A., Bajic, G., Goret, G., Jamin, M., Timmins, J. & Terradot, L. (2012). Architecture of a dodecameric bacterial replicative helicase. Structure, 20(3), 554-64. https://doi.org/10.1016/j.str.2012.01.020

Schmøkel, M. S., Bjerg, L., Overgaard, J., Larsen, F. K., Madsen, G. K. H., Sugimoto, K., Takata, M. & Iversen, B. B. (2013). Pushing X-ray Electron Densities to the Limit: Thermoelectric CoSb₃. Angewandte Chemie International Edition, 52(5), 1503-1506. https://doi.org/10.1002/anie.201206065

Christensen, N. B. & Lawrie, K. (2012). Resolution analyses for selecting an appropriate airborne electromagnetic (AEM) system. Exploration Geophysics, 43, 213-227. http://www.publish.csiro.au/nid/224/display/citation/paper/EG12005.htm

Xie, H.-H., Mi, J., Hu, L.-P., Lock, N., Christensen, M., Fu, C.-G., Iversen, B. B., Zhao, X.-B. & Zhu, T.-J. (2012). Interrelation between atomic switching disorder and thermoelectric properties of ZrNiSn half-Heusler compounds. CrystEngComm, 14, 4467-4471. https://doi.org/10.1039/c2ce25119a

Sun, Y., Christensen, M., Johnsen, S., Nong, N. V., Ma, Y., Sillassen, M. B., Zhang, E., Palmqvist, A. E. C., Bøttiger, J. & Iversen, B. B. (2012). Low-Cost High-Performance Zinc Antimonide Thin Films for Thermoelectric Applications. Advanced Materials, 24(13), 1693-1696. https://doi.org/10.1002/adma.201104947

Lock, N., Christensen, M., Wu, Y., Peterson, V. K., Thomsen, M. K., Piltz, R. O., Ramirez-Cuesta, A. J., McIntyre, G. J., Norén, K., Kutteh, R., Kepert, C. J., Kearly, G. J. & Iversen, B. B. (2013). Scrutinizing negative thermal expansion in MOF-5 by scattering techniques and ab initio calculations. Dalton Transactions , 42(6), 1996-2007. https://doi.org/10.1039/c2dt31491f

Yin, H., Christensen, M., Lock, N. & Iversen, B. B. (2012). Zn migration during spark plasma sintering of thermoelectric Zn₄Sb₃. Applied Physics Letters, 101(4). https://doi.org/10.1063/1.4731764

Pedersen, H. B., Domesle, C., Lammich, L., Dziarzhytski, S., Guerassimova, N., Treusch, R., Harbo, L. S., Heber, O., Jordon-Thaden, B., Arion, T., Förstel, M., Stier, M., Hergenhahn, U. & Wolf, A. (2013). Photolysis of water-radical ions H₂O⁺ in the xuv: Fragmentation through dicationic states. Physical Review A, 87(1), 013402-1-013401-10. https://doi.org/10.1103/PhysRevA.87.013402

Quinones, J. P., Gothelf, K. V., Kjems, J., Yang, C., Caballero, A. M. H., Schmidt, C. & Peniche Covas, C. (2013). Self-assembled nanoparticles of modified-chitosan conjugates for the sustained release of dl-α-tocopherol. Carbohydrate Polymers, 92(1), 856-864. https://doi.org/10.1016/j.carbpol.2012.10.005

Piotrowski, J. A. & Madsen, T. M. (2012). Genesis of the glaciotectonic thrust-fault complex at Halk Hoved, southern Denmark. Bulletin of the Geological Society of Denmark, 60, 61-80.

Livingstone, S. J., Clark, C., Piotrowski, J. A., Tranter, M., Bentley, M. J., Hodson, A., Swift, D. A. & Woodward, J. (2012). Theoretical framework and diagnostic criteria for the identification of palaeo-subglacial lakes. Quaternary Science Reviews, 53(C), 88-110. https://doi.org/10.1016/j.quascirev.2012.08.010

Fu, Y., Zeng, D., Chao, J., Jin, Y., Zhang, Z., Liu, H., Li, D., Ma, H., Huang, Q., Gothelf, K. V. & Fan, C. (2013). Single-step rapid assembly of DNA origami nanostructures for addressable nanoscale bioreactors. Journal of American Chemical Society, 135(2), 696-702. https://doi.org/10.1021/ja3076692

Farjami, E., Campos, R., Nielsen, J. S., Gothelf, K. V., Kjems, J. & Ferapontova, E. (2013). RNA aptamer-based electrochemical biosensor for selective and label-free analysis of dopamine. Analytical Chemistry, 85(1), 121-128. https://doi.org/10.1021/ac302134s

Quinones, J. P., Gothelf, K. V., Kjems, J., Caballero, A. M. H., Schmidt, C. & Covas, C. P. (2013). N,O6-partially acetylated chitosan nanoparticles hydrophobically-modified for controlled release of steroids and vitamin E. Carbohydrate Polymers, 91(1), 143-151. https://doi.org/10.1016/j.carbpol.2012.07.080

Kristiansen, M., Kryger, M., Zhang, Z., Voigt, N. V., Birkedal, V. & Gothelf, K. V. (2012). Extended DNA Tile Actuators. ChemPlusChem, 77(8), 636-642. https://doi.org/10.1002/cplu.201200149

Christensen, M. (2012). Neutron Scattering Investigations of Thermoelectric Materials. In D. M. Rowe (Ed.), Materials, Preparation, and Characterization in Thermoelectrics CRC Press. https://doi.org/10.1201/b11891-26

Gothelf, K. V. (2012). LEGO-like DNA Structures. Science, 338(6111), 1159-1160. https://doi.org/10.1126/science.1229960

Quinones, J. P., Gothelf, K. V., Kjems, J., Caballero, A. M. H., Schmidt, C. & Covas, C. P. (2012). Self-assembled nanoparticles of glycol chitosan – Ergocalciferol succinate conjugate, for controlled release. Carbohydrate Polymers, 88(4), 1373-1377. https://doi.org/10.1016/j.carbpol.2012.02.039

Jeppesen, E., Søndergaard, M., Lauridsen, T. L., Davidson, T. A., Liu, Z., Mazzeo, N., Trochine, C., Özkan, K., Jensen, H. S., Trolle, D., Starling, F., Lazzarro, X., Johansson, L. S., Hansen, R. B., Liboriussen, L., Larsen, S. E., Landkildehus, F., Egemose, S. & Meerhoff, M. (2012). Biomanipulation as a restoration tool to combat eutrophication: Recent advances and future challenges. Advances in Ecological Research, 47, 411-488. https://doi.org/10.1016/B978-0-12-398315-2.00006-5

Keller, A. C., Bald, I., Rotaru, A., Cauët, E., Gothelf, K. V. & Besenbacher, F. (2012). Probing Electron-Induced Bond Cleavage at the Single-Molecule Level Using DNA Origami Templates. A C S Nano, 6(5), 4392-4399. https://doi.org/10.1021/nn3010747

Kehew, A.E., A. E., Piotrowski, J. A. & Jørgensen, F. (2012). Tunnel valleys: Concepts and controversies — A review. Earth-Science Reviews, 113(1-2), 33-58. https://doi.org/10.1016/j.earscirev.2012.02.002

Funder, E. D., Jensen, A. B., Tørring, T., Kodal, A. L. B., Azcargorta, A. R. & Gothelf, K. V. (2012). Synthesis of Dopamine and Serotonin Derivatives for Immobilization on a Solid Support. Journal of Organic Chemistry, 77(7), 3134-3142. https://doi.org/10.1021/jo2025477

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