Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Knudsen, H. (2007). Karl Grandin; Nina Wormbs; Sven Widmalm (eds.) The Science-Industry Nexus: History, Politics, Implications. Centaurus (Copenhagen), 49(3), 250-251.

Knudsen, H. (2006). Anderew Brown, J.D. Bernal: The Sage of Science. Centaurus (Copenhagen), 48(4), 330-331.

Grauslund, M., Vinding, A., Füchtbauer, A. C., Hoflander, K. F., Hjorth, P. H., Jensen, P. B., Sehested, M., Füchtbauer, E.-M. & Jensen, L. H. (2007). A mouse model for studying the interaction of bisdioxopiperazines with topoisomerase IIα in vivo. Molecular Pharmacology, 72(4), 1003-1014. https://doi.org/10.1124/mol.107.036970

Abad, M., Menéndez, C., Füchtbauer, A. C., Serrano, M., Füchtbauer, E.-M. & Palmero, I. (2007). Ing1 mediates p53 accumulation and chromatin modification in respones to oncogenic stress. Journal of Biological Chemistry, 282(42), 31060-31067.

Berge, U., Kristensen, P. & Rattan, S. (2008). Hormetic modulation of differentiation of normal human epidermal keratinocytes undergoing replicative senescence in vitro. Experimental Gerontology, 43, 658-662.

Bødtkjer, E., Prætorius, J., Füchtbauer, E.-M. & Aalkjær, C. (2008). Antibody-independent localization of the electroneutral Na⁺-HCO₃^- cotransporter NBCn1 (slc4a7) in mice. American Journal of Physiology: Cell Physiology, 294(2), C591-C603.

Jacobsen-Lyon, K., Jensen, E. Ø., Jørgensen, J.-E., Marcker, K. A., Peacock, WJ. & Dennis, ES. (1995). Symbiotic and nonsymbiotic hemoglobin genes of Casuarina glauca. Plant Cell, 7(2), 213-23.

Jacobsen, K., Laursen, N. B., Jensen, E. Ø., Marcker, A., Poulsen, C. H. & Marcker, K. A. (1990). HMG I-like proteins from leaf and nodule nuclei interact with different AT motifs in soybean nodulin promoters. Plant Cell, 2(1), 85-94. https://doi.org/10.1105/tpc.2.1.85

Balthazar, M. V., Pedersen, K. R., Crane, P. R., Stamponi, P. R. & Friis, E. M. (2007). Potomacanthus lobatus gen. et sp. nov., a new flower of probable Lauraceae from the Early Cretaceous (Early to Middle Albian) of Eastern North America. American Journal of Botany, 94(12), 2041-2053.

Friis, E. M., Crane, P. R., Pedersen, K. R., Bengtson, S., Donoghue, P. C. J., Grimm, G. W. & Stamponi, M. (2007). Phase-contrast X-ray microtomography links Cretaceous seeds with Gnetales and Bennettitales. Nature, 450, 549-552.

Blechingberg, J., Lykke-Andersen, S., Jensen, T. H., Jørgensen, A. L. & Nielsen, A. L. (2007). Regulatory mechanisms for 3'-end alternative splicing and polyadenylation of the Glial Fibrillary Acidic Protein, GFAP, transcript. Nucleic Acids Research, 35(22), 7636-50. https://doi.org/10.1093/nar/gkm931

Nordentoft, I., Jeppesen, P. B., Nielsen, A. L., Jorgensen, P. & Hermansen, K. (2007). Expression Analysis of cPLA2 Alpha Interacting TIP60 in Diabetic KKAy and Non-Diabetic C57BL Wild-Type Mice: No Impact of Transient and Stable TIP60 Overexpression on Glucose-Stimulated Insulin Secretion in Pancreatic Beta-Cells. The review of diabetic studies : RDS, 4(3), 147-158. https://doi.org/10.1900/RDS.2007.4.147

Olesen, B. (2007). Plantelivet i Ringkøbing Fjord - mellem å og hav. In I. Nielsen & H.-H. Schierup (Eds.), Skjern Å (pp. 201-215)

Basbøll, A., Maybury, D., Riva, F. & West, S. M. (2007). Nonperturbative flat direction decay. Physical Review D, 76(065005). https://doi.org/10.1103/PhysRevD.76.065005

Nielsen, L. R., Jørgensen, E. & Højsgaard, S. (2011). Embedding a State Space Model Into a Markov Decision Process. Annals of Operations Research, 190(1), 289-309. https://doi.org/10.1007/s10479-010-0688-z

Bisgaard, C., Jayatissa, M. N., Enghild, J. J., Sanchéz, C., Artemychyn, R. & Wiborg, O. (2007). Proteomic investigation of the ventral rat hippocampus links DRP-2 to escitalopram treatment resistance and SNAP to stress resilience in the chronic mild stress model of depression. Journal of Molecular Neuroscience, 32(2), 132-44.

Andersen, H. (2008). Experiments and Concepts. (pp. 27-37). Max-Planck-Institut für Wissenschaftsgeschichte.

Heerfordt, A., Møhl, B. & Wahlberg, M. (2007). A wideband connection to sperm whales: A fiber-optic, deep-sea hydrophone array. Deep Sea Research I, 54, 428-436. https://doi.org/10.1016/j.dsr.2006.12.003

Simon, M., Wahlberg, M. & Miller, L. A. (2007). Echolocation clicks from killer whales (Orcinus orca) feeding on herring (Clupea harangus) (L). Acoustical Society of America. Journal, 121(2), 749-752.

Hansen, M. R., Brorson, M., Bildsøe, H. K., Skibsted, J. & Jakobsen, H. J. (2008). Sensitivity enhancement in natural-abundance solid-state ³³S MAS NMR spectroscopy employing adiabatic inversion pulses to the satellite transitions. Journal of Magnetic Resonance, 190, 316-326.

Dall, T. H., Foellmi, C., Pritchard, J., Lo Curto, G., Allende Prito, C., Bruntt, H., Amado, P. J., Arentoft, T., Baes, M., Depagne, E., Fernandez, M., Ivanov, V., Koesterke, L., Monaco, L., O'Brien, K., Sarro, L. M., Saviane, I., Scharwächter, J., Schmidtobreick, L. ... Sterzik, M. (2007). VSOP: the variable star one-shot project: I. Project presentation and first data release. Astronomy & Astrophysics (A&A), 1201-1214.

Korn, A. J., Grundahl, F., Richard, O., Mashonkina, L., Barklem, P. S., Collet, R., Gustafsson, B. & Piskunov, N. (2007). Atomic diffusion and mixing in old stars. I. Very Large Telescope FLAMES-UVES Observations of Stars in NGC 6397. Astrophysical Journal, 671, 402-419.

Calamida, A., Bono, G., Stetson, P. B., Freyhammer, L. M., Cassisi, S., Grundahl, F., Pietrinferni, A., Hilker, M., Primas, F., Richtler, T., Romaniello, M., Buonanno, R., Caputo, F., Catellani, M., Corsi, C. E., Ferraro, I., Iannicola, G. & Pulone, L. (2007). Strömgren photometry of galactic globular clusters. I. New calibrations of the metallicity index. Astrophysical Journal, 670(1), 400-422.

Xu, W., Ross, K. E. A., Otero Martin, R., Schöck, M., Lægsgaard, E., Stensgaard, I., Kontorovich, L. & Besenbacher, F. (2007). Probing the hierachy of thymine-thymine interactions in self-assembled structures by STM manipulation. Small, 3(12), 2011-2014.

Otero Martin, R., Lukas, M., Kelly, R. E. A., Xu, W., Lægsgaard, E., Stensgaard, I., Kantorovich, L. N. & Besenbacher, F. (2008). Elementary structural motifs in a random network of cytosine adsorbed on a gold (111) surface. Science, 319, 312-315. https://doi.org/10.1126/science.1150532

Nielsen, K. H. & Valásek, L. (2007). In vivo deletion analysis of the architecture of a multiprotein complex of translation initiation factors. Methods in Enzymology, 431, 15-32. https://doi.org/10.1016/S0076-6879(07)31002-1

Valásek, L., Szamecz, B., Hinnebusch, A. G. & Nielsen, K. H. (2007). In vivo stabilization of preinitiation complexes by formaldehyde cross-linking. Methods in Enzymology, 429, 163-83. https://doi.org/10.1016/S0076-6879(07)29008-1

Nielsen, K. H., Valásek, L., Sykes, C., Jivotovskaya, A. & Hinnebusch, A. G. (2006). Interaction of the RNP1 motif in PRT1 with HCR1 promotes 40S binding of eukaryotic initiation factor 3 in yeast. Molecular and Cellular Biology, 26(8), 2984-98. https://doi.org/10.1128/MCB.26.8.2984-2998.2006

Jivotovskaya, A. V., Valásek, L., Hinnebusch, A. G. & Nielsen, K. H. (2006). Eukaryotic translation initiation factor 3 (eIF3) and eIF2 can promote mRNA binding to 40S subunits independently of eIF4G in yeast. Molecular and Cellular Biology, 26(4), 1355-72. https://doi.org/10.1128/MCB.26.4.1355-1372.2006

Hinnebusch, A. G., Asano, K., Olsen, D. S., Phan, L., Nielsen, K. H. & Valásek, L. (2005). Study of translational control of eukaryotic gene expression using yeast. New York Academy of Sciences. Annals, 1038, 60-74. https://doi.org/10.1196/annals.1315.012

Nielsen, K. H., Szamecz, B., Valásek, L., Jivotovskaya, A., Shin, B.-S. & Hinnebusch, A. G. (2004). Functions of eIF3 downstream of 48S assembly impact AUG recognition and GCN4 translational control. E M B O Journal, 23(5), 1166-77. https://doi.org/10.1038/sj.emboj.7600116

Valásek, L., Nielsen, K. H. & Hinnebusch, A. G. (2002). Direct eIF2-eIF3 contact in the multifactor complex is important for translation initiation in vivo. E M B O Journal, 21(21), 5886-98.

Phan, L., Schoenfeld, L. W., Valásek, L., Nielsen, K. H. & Hinnebusch, A. G. (2001). A subcomplex of three eIF3 subunits binds eIF1 and eIF5 and stimulates ribosome binding of mRNA and tRNA(i)Met. E M B O Journal, 20(11), 2954-65. https://doi.org/10.1093/emboj/20.11.2954

Nielsen, K. H., Gredsted, L., Broach, J. R. & Willumsen, B. M. (2001). Sensitivity of wild type and mutant ras alleles to Ras specific exchange factors: Identification of factor specific requirements. Oncogene, 20(17), 2091-100. https://doi.org/10.1038/sj.onc.1204306

Nielsen, K. H., Papageorge, A. G., Vass, W. C., Willumsen, B. M. & Lowy, D. R. (1997). The Ras-specific exchange factors mouse Sos1 (mSos1) and mSos2 are regulated differently: mSos2 contains ubiquitination signals absent in mSos1. Molecular and Cellular Biology, 17(12), 7132-8.

Andersen, C. L., Christensen, L. L., Thorsen, K., Schepeler, T., Sørensen, F. B., Verspaget, H. W., Simon, R., Kruhøffer, M., Aaltonen, L. A., Laurberg, S. & Ørntoft, T. F. (2009). Dysregulation of the transcription factors SOX4, CBFB, and SMARCC1 correlates with outcome of colorectal cancer. British Journal of Cancer.

Calamida, A., Bono, G., Freyhammer, L. M., Grundahl, F., Corsi, C. E., Stetson, P. B., Buonanno, R., Hilker, M. & Richtler, T. (2008). Metallicity distribution of ω Cen Red Giants based on the Strömgren m1 metallicity index. In A. Vazdekis & R. F. Peletier (Eds.), Stellar Populations as Building Blocks of Galaxies, Proceedings of IAU Symposium #241 (pp. 223-226). Cambridge University Press. https://doi.org/10.1017/S1743921307007958

Montalto, M., Piotto, G., Desidera, S., De Marchi, F., Bruntt, H., Stetson, P. B., Arellano Ferro, A., Momany, Y., Gratton, R. G., Poretti, E., Aparicio, A., Barbieri, M., Claudi, R. U., Grundahl, F. & Rosenberg, A. (2007). A new search for planet transits in NGC 6791. Astronomy & Astrophysics (A&A), 470, 1137-1156.

Landolt, A. U., Martinez, P., Bastien, P., Fabrika, S., Gilliland, R., Grundahl, F., Jordi, C. & Munari, U. (2007). Commission 25: Stellar Photometry and Polarimetry. In O. Engvold (Ed.), IAU Transactions, Reports on Astronomy 2002-2005 (Vol. 26A, pp. 307-312). International Astronomical Union.

Valenti, S., Elias-Rosa, N., Taubenberger, S., Stanishev, V., Agnoletto, I., Sauer, D., Cappellaro, E., Pastorello, A., Benetti, S., Riffeser, A., Hopp, U., Navasardyan, H., Tsvetkov, D., Lorenzi, V., Patat, P., Turatto, M., Barbon, R., Ciroi, S., Di Mille, F. ... Mazzali, P. A. (2008). The carbon-rich type Ic SN 2007gr: the photospheric phase. Astrophysical Journal, 673(1), L155-L158.

Yong, D. & Grundahl, F. (2008). An abundance analysis of bright giants in the globular cluster NGC 1851. Astrophysical Journal, 672(1), L29-L32.

Na, T., Gribsholt, B., Galaktionov, OS., Lee, T. & Meysman, FJR. (2008). Influence of advective bio-irrigation on carbon and nitrogen cycling in sandy sediments. Journal of Marine Research, 66, 691-722.

Skivesen, N., Canning, J., Kristensen, M., Martelli, C., Tetu, A. & Frandsen, L. H. (2008). Photonic Crystal Waveguide-based Biosensor. Paper presented at The Optical Fiber Communication Conference, OFC 2008, San Diego, United States.

Canning, J., Kristensen, M., Skivesen, N., Frandsen, L. H., Lavrinenko, A. V., Tetu, A., Chevallier, J. & Martelli, C. (2008). Band Edge Effects in Photonic Crystal Waveguides: Polarisation Conversion. Paper presented at The Optical Fiber Communication Conference, OFC2008, San Diego, United States.

Sonne-Schmidt, C. S., Sanggaard, K. W. & Enghild, J. J. (2007). Separation of oligosaccharides of hyaluronan. In Years of experience in every column (GE Healthcare booklet)

Canning, J., Kristensen, M., Skivesen, N., Martelli, C., Tetu, A., Frandsen, L. & Chevallier, J. (2008). Generation of Ultra Narrow Sensing Filters Using Cross Polarisation in a Linear SOI Photonic Crystal Waveguide. Poster session presented at Optical Fibre Sensors, OFS-19, 2008, Perth, Australia.

Malte, H., Larsen, C., Musyl, M. & Richard, B. (2007). Differential heating and cooling rates in bigeye tuna (Thunnus obesus Lowe):a model of non-steady state heat exchange. Journal of Experimental Biology, 210, 2618-2626.

Watabe, S., Nikuni, T., Nygaard, N., Williams, J. E. & Clark, C. W. (2007). Adiabatic Phase Diagram of a Degenerate Fermi Gas with a Feshbach Resonance. Journal of Low Temperature Physics, 148(3-4), 435-440.

Watabe, S., Nikuni, T., Nygaard, N., Williams, J. E. & Clark, C. W. (2007). Adiabatic Phase Diagram of an Ultracold Atomic Fermi Gas with a Feshbach Resonance. Journal of the Physical Society of Japan, 76(064003).

Riis, T., Madsen, T. V. & Sennels, R. S. H. (2009). Regeneration and growth rates of allofragments in four common stream plants. Aquatic Botany, (90), 209-212. https://doi.org/10.1016/j.aquabot.2008.08.005

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Anne Kirstine Mehlsen