Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Lu, Y.-W., Julsgaard, B., Petersen, M. C., Jensen, R. V. S., Pedersen, T. G., Pedersen, K. & Nylandsted Larsen, A. (2010). Erbium diffusion in silicon dioxide. Applied Physics Letters, 97(14), 141903. https://doi.org/10.1063/1.3497076

Fomsgaard, I. S., Añon, M. C., Barba de la Rosa, A. P., Christophersen, C., Dusek, K., Délano-Frier, J., Espinoza Pérez, J., Fonseca, A., Janovská, D., Kudsk, P., Labouriau, R. S., Lacayo Romero, M. L., Martínez, N., Matus, F., Matusová, K., Mathiassen, S. K., Noellemeyer, E. J., Pedersen, H. A., Stavelikova, H. ... Taberner, A. (2010). Adding Value to Holy Grain: Providing the Key Tools for the Exploitation of Amaranth - the Protein-rich Grain of the Aztecs. Results from a Joint European - Latin American ResearchProject. Aarhus University.

Holmkvist, L., Arning, E. T., Küster-Heins, K., Vandieken, V., Peckmann, J., Zabel, M. & Jørgensen, B. B. (2010). Phosphate geochemistry, mineralization processes, and Thioploca distribution in shelf sediments off central Chile. Marine Geology, (277), 61-72.

Svendsen, H., Overgaard, J., Chevallier, M.-A. S. & Iversen, B. B. (2006). Hexaaqua-1 k³O,3k³ O-tri-m-cyano-1:2k²N:C;2:3k²C:N;3:4k²N:C-nonacyano-2k⁴C,4k⁵C-pentakis(N,N-dimethylacetamide)-1k3O,3k²O-diiron(III)diytterbium(III) dihydrate. Acta Crystallographica Section E: Crystallographic Communications, 62(4), 793-795. https://doi.org/10.1107/S160053680600883X

Overgaard, J., Svendsen, H., Chevallier, M.-A. S. & Iversen, B. B. (2005). Triaquatetrakis(dimethylacetamide-kO)-neodymium(III) hexacyanoferrate(III) trihydrate. Acta Crystallographica Section E: Crystallographic Communications, 61(2), 268-270. https://doi.org/10.1107/S1600536805000577

Lock, N., Hald, P., Christensen, M., Birkedal, H. & Iversen, B. B. (2010). Continuous flow supercritical water synthesis and crystallographic characterization of anisotropic boehmite nanoparticles. Journal of Applied Crystallography, 43(Part 4), 858-866. https://doi.org/10.1107/S0021889810019187

Nielsen, K. H. & Kjærgaard, R. S. (2011). News coverage of climate change in Nature News and ScienceNOW during 2007. Environmental Communication, 5(1), 25-44. https://doi.org/10.1080/17524032.2010.520722

Kjærgaard, R. S. (2011). Things to see and do: how scientific images work. In D. J. Bennett & R. C. Jennings (Eds.), Successful Science Communication: Telling it like it is (1 ed., pp. 332-354). Cambridge University Press.

Llorente, B., Bravo-Almonacid, F., Cvitanich, C., Orlowska, E. Z., Torres, H. N., Flawia, M. M. & Alonso, G. D. (2010). A quantitative real-time PCR method for in planta monitoring of Phytophthora infestans growth. Letters in Applied Microbiology, 51 (6): 603-10.

Orlowska, E. Z., Orlowski, D., Mesjasz-Przybyłowicz, J. & Turnau, K. (2011). Role of mycorrhizal colonization in plant establishment on the alkaline gold mine tailing. International Journal of Phytoremediation, 13, 1-21.

Brassard, G. & Damgård, I. B. (1990). "Practical IP" <- MA. In S. Goldwasser (Ed.), Advances in Cryptology - CRYPTO' 88: Proceedings (pp. 580-582). Springer. https://doi.org/10.1007/0-387-34799-2_42

Gammelmark, S. (2010). Simuluating quantum many-body systems subject to measurements. Poster session presented at Nordic Network Meeting: Cold Atoms and Condensed Matter, Vedbæk, Denmark.

Gammelmark, S. (2010). Simulating quantum many-body systems subject to measurements. Poster session presented at PRACQSYS 2010, Sandbjerg Gods, Denmark.

Kristensen, T. G. (2010). Transforming Tanimoto queries on real valued vectors to range queries in Euclidian space. Journal of Mathematical Chemistry, 48(2), 287-289. https://doi.org/10.1007/s10910-010-9668-4

Kristensen, T. G. & Pedersen, C. N. S. (2010). Data Structures for Accelerating Tanimoto Queries on Real Valued Vectors. In V. Moulton & M. Singh (Eds.), Algorithms in Bioinformatics: 10th International Workshop (WABI 2010) (Vol. 6293, pp. 28-39). Springer.

Laustsen, C., Ringgaard, S., Pedersen, M. & Nielsen, N. C. (2010). Binomial Sequence for Selective Quadrupolar 23Na in Vitro and in Vivo NMR and MRI. Abstract from ISMRM, Stockholm, Sweden.

Rasmussen, A. S., Lauridsen, H., Jensen, B., Fjord, S., Wang, T., Uldbjerg, N. & Pedersen, M. (2010). High-Resolution Ex Vivo Magnetic Resonance Angiography: A Feasibility Study on Biological and Medical Tissues. Abstract from ISMRM, Stockholm, Sweden.

Tommerup, A., Barfod, A. S. & Pertoldi, C. (2010). Study of clonality in the mangrove palm Nypa fruticans Wurmb. Poster session presented at Palms 2010 - International Symposium on the Biology of the Palm Family, Montpellier, France.

Fogh Møller, M., Kjeldsen, K. U. & Ingvorsen, K. (2010). Marinimicrobium haloxylanilyticum sp. nov., a new moderately halophilic, polysaccharide-degrading bacterium isolated from Great Salt Lake, Utah. Antonie van Leeuwenhoek: Journal of Microbiology, 98(4), 553-565.

Tovaranonte, J., Barfod, A. S., Overgaard, A. B., Pongsattayapipat, R., Svenning, J.-C. & Balslev, H. (2010). Determinants of palm species distributions in Thailand - insights from species distribution modeling. Poster session presented at Palms 2010 - International Symposium on the Biology of the Palm Family, Montpellier, France.

Nielsen, K. H. (2010). Technological Trajectories in the Making: Two Case Studies from the Contemporary History of Wind Power. Centaurus (Copenhagen), 52(3), 175-205. https://doi.org/10.1111/j.1600-0498.2010.00179.x

Nielsen, K. H. (2010). Her går det godt: - og send så flere penge! Videnskab.dk. http://videnskab.dk/content/dk/blogs/bag_om_videnskaben/her_gar_det_godt_%E2%80%93_og_send_sa_flere_penge

Barfod, A. S., Dowe, J. L. & Suksathan, P. (2010). Major Jenkins' fan palm in Thailand. Palms, 54(3), 109-118.

Barboza, P. S., Bennett, A., Lignot, H.-H., Mackie, R. I., McWhorter, T. J., Secor, S. M., Skovgaard, N., Sundset, M. A. & Wang, T. (2010). Digestive challenges for vertebrate animals: Microbial diversity, cardiorespiratory coupling, and dietary specialization. Physiological and Biochemical Zoology, 83(5), 764-774. https://doi.org/10.1086/650472

Hou, J.-X., Svaneborg, C., Everaers, R. & Crest, G. S. (2010). Stress Relaxation in Entangled Polymer Melts. Physical Review Letters, 105(6), 068301-068304.

Malte, H. & Weber, R. E. (1989). Gas exchange in fish gills with parallel inhomogeneities. Respiration physiology, 76(1), 129-37.

Kyng, M. (1989). Designing for a Dollar a Day. Information Technology & People, 4(2), 157-170.

Kristensen, L. M. & Westergaard, M. (2010). Automatic Structure-Based Code Generation from Coloured Petri Nets: A Proof of Concept. Lecture Notes in Computer Science, 6371, 215-230. https://doi.org/10.1007/978-3-642-15898-8_14

Kristensen, T. G., Nielsen, J. & Pedersen, C. N. S. (2010). A tree-based method for the rapid screening of chemical fingerprints. Algorithms for Molecular Biology, 5(9). https://doi.org/10.1186/1748-7188-5-9

Seberg, O., Petersen, G., Barfod, A. S. & Davis, J. I. (Eds.) (2010). Diversity, Phylogeny, and Evolution in the Monocotyledons: Proceedings of the Fourth International Conference on the Comparative Biology of the Monocotyledons and the Fifth International Symposium on Grass Systematics and Evolution. In Diversity, Phylogeny, and Evolution in the Monocotyledons: Proceedings of the Fourth International Conference on the Comparative Biology of the Monocotyledons and the Fifth International Symposium on Grass Systematics and Evolution Aarhus Universitetsforlag.

Borchsenius, F., Bernal, R. & Pintaud, J.-C. (2010). A phylogeny of the Andean palm genus Aiphanes. Abstract from A phylogeny of the Andean palm genus Aiphanes, Montpellier, France.

Storz, J. F., Runck, A. M., Moriyama, H., Weber, R. E. & Fago, A. (2010). Mechanisms of hemoglobin adaptation to hypoxia in high-altitude rodents. Abstract from XVIth International conference on oxygen binding and sensing proteins, Antwerpen, Netherlands.

Tilleman, L., De Henau, S., Geuens, E., Hoogewijs, D., Nardini, M., Vinck, E., Pesce, A., Kiger, L., Fago, A., Marden, M., Weber, R. E., Van Doorslaer, S., Vanfleteren, J., Moens, L., Bolognesi, M. & Dewilde, S. (2010). Characterization and myristoylation of C. elegans GLB-26. Abstract from XVIth International conference on oxygen binding and sensing proteins, Antwerpen, Netherlands.

Helbo, S. & Fago, A. (2010). S-nitrosylation allosterically modulates the O2 affinity of myoglobin from rainbow trout. Abstract from XVIth International conference on oxygen binding and sensing proteins, Antwerpen, Netherlands.

Kristiansen, T., Svenning, J.-C., Pedersen, D., Eiserhardt, W. L., Grández, C. & Balslev, H. (2010). Local and regional palm species richness in the western Amazon: Richness patterns driven by both local and regional factors. Poster session presented at Palms 2010 - Biology of the palm family, Montpellier, France.

Sand, A., Brask, A. T., Pedersen, C. N. S., Mailund, T. & Brask, A. T. (2010). HMMlib: A C++ Library for General Hidden Markov Models Exploiting Modern CPUs. In 2010 Ninth International Workshop on Parallel and Distributed Methods in Verification and Second International Workshop on High Performance Computational Systems Biology (pp. 126 - 134 ). IEEE.

Riis, T. & Baattrup-Pedersen, A. (2011). Spatial distribution and temporal dynamic of the seed pool in a Danish lowland stream. Aquatic Botany, 94, 188-192.

Abu-Samha, M. & Madsen, L. B. (2010). Photoelectron angular distributions from polar molecules probed by intense femtosecond lasers. Physical Review A, 82(4), 043413. https://doi.org/10.1103/PhysRevA.82.043413

Frøyshov, K. A. (2010). Monopole Floer homology for rational homology 3-spheres. Duke Mathematical Journal, 155(3), 519-576. https://doi.org/10.1215/00127094-2010-060

Vivika, M., Odgaard, B. V. & Poska, A. (2010). Imperical and modelling approaches to identify diversity signals in pollen assemblages. Poster session presented at LANDCLIM Workshop on vegetation modelling and vegetation palaeodata, Lund, Sweden.

Odgaard, B. V. (2011). Holocene climate variability: Boreas book review: Battarbee, R. W. & Binney, H. A. (Eds.) 2008: Natural Climate Variability and Global Warming. A HolocenePerspective. 276 pp. Wiley-Blackwell, Chichester. ISBN 978-1-4051-5905-0. Hardbound, Full Colour. Boreas, 40, 208-209.

Bender, M. A., Brodal, G. S., Fagerberg, R., Jacob, R. & Vicari, E. (2010). Optimal Sparse Matrix Dense Vector Multiplication in the I/O-Model. Theory of Computing Systems, 47(4), 934-962. https://doi.org/10.1007/s00224-010-9285-4

Brodal, G. S., Gfeller, B., Jørgensen, A. G. & Sanders, P. (2011). Towards optimal range medians. Theoretical Computer Science, 412(24), 2588-2601. https://doi.org/10.1016/j.tcs.2010.05.003

Bender, M. A., Brodal, G. S., Fagerberg, R., Ge, D., He, S., Hu, H., Iacono, J. & López-Ortiz, A. (2011). The Cost of Cache-Oblivious Searching. Algorithmica, 61(2), 463-505. https://doi.org/10.1007/s00453-010-9394-0

Kutz, M., Brodal, G. S., Kaligosi, K. & Katriel, I. (2011). Faster Algorithms for Computing Longest Common Increasing Subsequences. Journal of Discrete Algorithms, 9(4), 314-325. https://doi.org/10.1016/j.jda.2011.03.013

Afshani, P., Brodal, G. S. & Zeh, N. (2011). Ordered and Unordered Top-K Range Reporting in Large Data Sets. In Proceedings of the 22nd Annual ACM-SIAM Symposium on Discrete Algoritms. SODA 2011 (pp. 390-400). Society for Industrial and Applied Mathematics. http://www.siam.org/proceedings/soda/2011/SODA11_031_afshanip.pdf

Petersen, M. G., Krogh, P., Mortensen, M. B., Møller-Lassen, T. & Mortensen, D. H. (2010). Collective interaction by design collective controllers for social navigation on digital photos. In Proceedings of the 6th Nordic Conference on Human-Computer Interaction: Extending Boundaries (pp. 353-362). Association for Computing Machinery. https://doi.org/10.1145/1868914.1868956

Petersen, M. G., Lynggard, A. B., Krogh, P. G. & Winther, I. W. (2010). Tactics for homing in mobile life: a fieldwalk study of extremely mobile people. In Proceedings of the 12th International Conference on Human Computer Interaction with Mobile Devices and Services: Proceedings of the 12th international conference on Human computer interaction with mobile devices and services (pp. 265-274). Association for Computing Machinery. https://doi.org/10.1145/1851600.1851646

Kannabiran, G. & Petersen, M. G. (2010). Politics at the interface: a Foucauldian power analysis. In E. T. Hvannberg & M. K. Lárusdóttir (Eds.), Proceedings of the 6th Nordic Conference on Human-Computer Interaction. NordiCHI '10: Extending Boundaries (pp. 695-698). Association for Computing Machinery. https://doi.org/10.1145/1868914.1869007

Lynggaard, A. B., Petersen, M. G., Gude, R. & Mortensen, M. B. (2010). Home awareness - connecting people sensuously to places. In O. W. Bertelsen, P. Krogh, K. Halskov & M. G. Petersen (Eds.), Proceedings of the 8th ACM Conference on Designing Interactive Systems, DIS '10 (pp. 416-418). Association for Computing Machinery. https://doi.org/10.1145/1858171.1858251

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