Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Hoffmann, F., Xue, M., Schäfer, L. V. & Mulder, F. A. A. (2018). Narrowing the gap between experimental and computational determination of methyl group dynamics in proteins. Physical Chemistry Chemical Physics, 20(38), 24577-24590. https://doi.org/10.1039/c8cp03915a

Kijewski, T., Zbawicka, M., Strand, J., Kautsky, H., Kotta, J., Rätsep, M. & Wenne, R. (2019). Random forest assessment of correlation between environmental factors and genetic differentiation of populations: Case of marine mussels Mytilus. Oceanologia, 61(1), 131-142. https://doi.org/10.1016/j.oceano.2018.08.002

Zhang, Y., Lyu, T., Zhang, L., Button, M., Arias, C. A., Weber, K. P., Shi, J., Chen, Z., Brix, H. & Carvalho, P. N. (2019). Microbial community metabolic profiles in saturated constructed wetlands treating iohexol and ibuprofen. Science of the Total Environment, 651, 1926-1934. https://doi.org/10.1016/j.scitotenv.2018.10.103

Kristensen, E., Røy, H., Debrabant, K. & Valdemarsen, T. (2018). Carbon oxidation and bioirrigation in sediments along a Skagerrak−Kattegat−Belt Sea depth transect. Marine Ecology Progress Series, 604, 33–50. https://doi.org/10.3354/meps12734

Beulig, F., Røy, H., McGlynn, S. E. & Jørgensen, B. B. (2019). Cryptic CH₄ cycling in the sulfate–methane transition of marine sediments apparently mediated by ANME-1 archaea. ISME Journal, 13(2), 250-262. https://doi.org/10.1038/s41396-018-0273-z

Joyce, W., Miller, T. E., Elsey, R. M., Wang, T. & Crossley, D. A. (2018). The effects of embryonic hypoxic programming on cardiovascular function and autonomic regulation in the American alligator (Alligator mississippiensis) at rest and during swimming. Journal of Comparative Physiology B: Biochemical, Systemic, and Environmental Physiology, 188(6), 967-976. https://doi.org/10.1007/s00360-018-1181-2

Joyce, W., Egginton, S., Farrell, A. P., Crockett, E. L., O'Brien, K. M. & Axelsson, M. (2018). Exploring nature's natural knockouts: In vivo cardiorespiratory performance of Antarctic fishes during acute warming. Journal of Experimental Biology, 221(15). https://doi.org/10.1242/jeb.183160

Joyce, W., Williams, C. J. A., Iversen, S., Henriksen, P. G., Bayley, M. & Wang, T. (2019). The effects of endogenous and exogenous catecholamines on hypoxic cardiac performance in red-bellied piranhas. Journal of Experimental Zoology. Part A: Ecological and Integrative Physiology , 331(1), 27-37. https://doi.org/10.1002/jez.2233

Boukens, B. J. D., Kristensen, D. L., Filogonio, R., Carreira, L. B. T., Sartori, M. R., Abe, A. S., Currie, S., Joyce, W., Conner, J., Opthof, T., Crossley, D. A., Wang, T. & Jensen, B. (2019). The electrocardiogram of vertebrates: Evolutionary changes from ectothermy to endothermy. Progress in Biophysics and Molecular Biology, 144, 16-29. https://doi.org/10.1016/j.pbiomolbio.2018.08.005

Joyce, W. (2018). Pythons sacrifice muscle to provide water for their eggs. Journal of Experimental Biology, 221(17), Article jeb.170175. https://doi.org/10.1242/jeb.170175

Joyce, W. (2018). Flying is not for the small-hearted. Journal of Experimental Biology, 221(5). https://doi.org/10.1242/jeb.169912

Vestbo, S., Hindberg, C., Olesen, J. M. & Funch, P. (2019). Eiders as Long Distance Connectors in Arctic Networks. Cross-Cultural Research, 53(3), 252-271. https://doi.org/10.1177/1069397118806820

Madsen, J. K., Giehm, L. & Otzen, D. E. (2018). The Use of Surfactants to Solubilise a Glucagon Analogue. Pharmaceutical Research, 35(12), Article 235. https://doi.org/10.1007/s11095-018-2494-2

Marzocchi, U., Bonaglia, S., van de Velde, S., Hall, P. O. J., Schramm, A., Risgaard-Petersen, N. & Meysman, F. J. R. (2018). Transient bottom water oxygenation creates a niche for cable bacteria in long-term anoxic sediments of the Eastern Gotland Basin. Environmental Microbiology, 20(8), 3031-3041. https://doi.org/10.1111/1462-2920.14349

Pohl, F., Froitzheim, N., Obermüller, G., Tomaschek, F., Schröder, O., Nagel, T., Sciunach, D. & Heuser, A. (2018). Kinematics and Age of Syn‐Intrusive Detachment Faulting in the Southern Alps: Evidence for Early Permian Crustal Extension and Implications for the Pangea A Versus B Controversy. Tectonics, 37(10), 3668-3689. https://doi.org/10.1029/2018TC004974

Hippe, K., Gordijn, T., Hajdas, I., Jansen, J., Christl, M., Vockenhuber, C., Maden, C., Akcar, N. & Ivy-Ochs, S. (2019). Fluvial dynamics and ¹⁴C‐¹⁰Be disequilibrium on the Bolivian Altiplano. Earth Surface Processes and Landforms, 44(3), 766-780. https://doi.org/10.1002/esp.4529

N. Martin, A., Dosseto, A., May, J. H., Jansen, J., P. J. Kinsley, L. & R. Chivas, A. (2019). Sediment residence times in catchments draining to the Gulf of Carpentaria, northern Australia inferred by uranium comminution dating. Geochimica et Cosmochimica Acta, 244, 264-291. https://doi.org/10.1016/j.gca.2018.09.031

Stolle, A., Schwanghart, W., Andermann, C., Bernhardt, A., Fort, M., Jansen, J., Wittmann, H., Merchel, S., Rugel, G., Raj Adhikari, B. & Korup, O. (2019). Protracted river response to medieval earthquakes. Earth Surface Processes and Landforms, 44(1), 331-341. https://doi.org/10.1002/esp.4517

Andersen, E. S., Flensted-Jensen, E. & Nielsen, M. G. (2018). En metode til undersøgelse af Vendehalsens fødevalg til redeungerne. Dansk Ornitologisk Forenings Tidsskrift, 112(3), 79-89. http://pub.dof.dk/dof/DOFT/En_metode_til_undersøgelse.pdf

Lee, Y. J., Miyamoto, R., Shea, T. & Thomsen, H. D. (2018). The Beam Conditions on the Target and its Operational Impacts on Beam Intercepting Devices at European Spallation Source. 110-115. Paper presented at ICFA ABDW on High-Intensity and High-Brightness Hadron Beams, Daejeon, Korea, Republic of. https://doi.org/10.18429/JACoW-HB2018-TUP2WE02

Carvalho, P. N., Zhang, L., Lyu, T., Ramírez Vargas, C. A., Arias, C. A., Bester, K. & Brix, H. (2018). Constructed wetlands support matrix: effects on the removal of organic micropollutants and microbial community function. Abstract from 16th IWA International Conference on Wetland Systems for Water Pollution Control, Valencia, Spain.

Ludvigsen, M., Bjerregård Pedersen, M., Lystlund Lauridsen, K., Svenstrup Poulsen, T., Hamilton-Dutoit, S. J., Besenbacher, S., Bendix, K., Møller, M. B., Nørgaard, P., d'Amore, F. & Honoré, B. (2018). Proteomic profiling identifies outcome-predictive markers in patients with peripheral T-cell lymphoma, not otherwise specified. Blood Advances, 2(19), 2533-2542. https://doi.org/10.1182/bloodadvances.2018019893

Voight, B., Clifton, A., Hjartarson, Á., Steingrímsson, B., Brandsdóttir, B., Rodríguez, C., McGarvie, D., Sigmundsson, F., Ívarsson, G., Friðleifsson, G. Ó., Larsen, G., Jónsdóttir, G. S., Noll, H., McDougall, I., Kaldal, I., Friðleifsson, I. B., Aronson, J. L., Karson, J. A., Grönvold, K. ... Friedrich, W. (2020). A half-century of geologic and geothermic investigations in Iceland: The legacy of Kristján Sæmundsson. Journal of Volcanology and Geothermal Research, 391, Article 106434. https://doi.org/10.1016/j.jvolgeores.2018.08.012

Abdelmalak, M. M., Planke, S., Polteau, S., Hartz, E. H., Faleide, J. I., Tegner, C., Jerram, D. A., Millett, J. M. & Myklebust, R. (2019). Breakup volcanism and plate tectonics in the NW Atlantic. Tectonophysics, 760, 267-296. https://doi.org/10.1016/j.tecto.2018.08.002

Docherty, C. L., Hannah, D. M., Riis, T., Lund, M., Abermann, J. & Milner, A. M. (2018). Spatio-temporal dynamics of macroinvertebrate communities in northeast Greenlandic snowmelt streams. Ecohydrology, 11(7), Article 1982. https://doi.org/10.1002/eco.1982

Meldgaard, S. A., Kolsbjerg, E. L. & Hammer, B. (2018). Machine learning enhanced global optimization by clustering local environments to enable bundled atomic energies. Journal of Chemical Physics, 149(13), Article 134104. https://doi.org/10.1063/1.5048290

Riede, F., Hoye, T. T., Tejsner, P., Veldhuis, D. & Willerslev, R. (2018). Special Section Introduction: Socioecological Disequilibrium in the Circumpolar North. Human Ecology, 46(5), 615-620. https://doi.org/10.1007/s10745-018-0009-8

Eiserhardt, W. L., Dransfield, J., Rakotoarinivo, M. & Baker, W. J. (2018). Four new species of Dypsis (Arecaceae: Arecoideae) from Madagascar. Kew Bulletin, 73(4), Article 44. https://doi.org/10.1007/s12225-018-9776-z

Yue, K., Garcia-Palacios, P., Parsons, S. A., Yang, W., Peng, Y., Tan, B., Huang, C. & Wu, F. (2018). Assessing the temporal dynamics of aquatic and terrestrial litter decomposition in an alpine forest. Functional Ecology, 32(10), 2464-2475. https://doi.org/10.1111/1365-2435.13143

Greibe, E., Nymark, O., Fedosov, S., Heegaard, C. W. & Nexø, E. (2018). Differences in tissue distribution of cyano-B12 and hydroxo-B12 one week after oral intake: An experimental study in male Wistar rats. Nutrients, 10(10), Article 1487. https://doi.org/10.3390/nu10101487

Fiandaca, G., Madsen, L. M. & Maurya, P. K. (2018). Re-parameterisations of the Cole-Cole model for improved spectral inversion of induced polarization data. Near Surface Geophysics, 16(4), 385-399. https://doi.org/10.3997/1873-0604.2017065

Salgado, J., Sayer, C. D., Brooks, S. J., Davidson, T. A., Goldsmith, B., Patmore, I. R., Baker, A. G. & Okamura, B. (2018). Eutrophication homogenizes shallow lake macrophyte assemblages over space and time. Ecosphere, 9(9), Article e02406. https://doi.org/10.1002/ecs2.2406

Koch, B. E. V., Yang, S., Lamers, G., Stougaard, J. & Spaink, H. P. (2018). Intestinal microbiome adjusts the innate immune setpoint during colonization through negative regulation of MyD88. Nature Communications, 9(1), Article 4099. https://doi.org/10.1038/s41467-018-06658-4

Flygaard, R. K., Boegholm, N., Yusupov, M. & Jenner, L. B. (2018). Cryo-EM structure of the hibernating Thermus thermophilus 100S ribosome reveals a protein-mediated dimerization mechanism. Nature Communications, 9(1), Article 4179. https://doi.org/10.1038/s41467-018-06724-x

Lykke-Andersen, S., Ardal, B. K., Hollensen, A. K., Damgaard, C. K. & Jensen, T. H. (2018). Box C/D snoRNP Autoregulation by a cis-Acting snoRNA in the NOP56 Pre-mRNA. Molecular Cell, 72(1), 99-111.e1-e5. https://doi.org/10.1016/j.molcel.2018.08.017

Saleem, M. A., Soares da Costa, F., Dolog, P., Karras, P., Pedersen, T. B. & Calders, T. (2018). Predicting Visitors Using Location-Based Social Networks. In Proceedings - 2018 IEEE 19th International Conference on Mobile Data Management, MDM 2018 (pp. 245-250). IEEE. https://doi.org/10.1109/MDM.2018.00043

Shliaha, P. V., Gibb, S., Gorshkov, V., Jespersen, M. S., Andersen, G. R., Bailey, D., Schwartz, J., Eliuk, S., Schwämmle, V. & Jensen, O. N. (2018). Maximizing Sequence Coverage in Top-Down Proteomics by Automated Multimodal Gas-Phase Protein Fragmentation. Analytical Chemistry, 90(21), 12519-12526. https://doi.org/10.1021/acs.analchem.8b02344

Jacobs, S., Wavreil, F., Schepens, B., Gad, H. H., Hartmann, R., Rocha-Pereira, J., Neyts, J., Saelens, X. & Michiels, T. (2018). Species Specificity of Type III Interferon Activity and Development of a Sensitive Luciferase-Based Bioassay for Quantitation of Mouse Interferon-λ. Journal of Interferon & Cytokine Research, 38(11), 469–479. https://doi.org/10.1089/jir.2018.0066

Liu, A. L., Jiang, M. R., Ulrich, T., Zhang, J. & Zhang, X. J. (2018). Ore genesis of the Bake gold deposit, southeastern Guizhou province, China: Constraints from mineralogy, in-situ trace element and sulfur isotope analysis of pyrite. Ore Geology Reviews, 102, 740-756. https://doi.org/10.1016/j.oregeorev.2018.09.018

Irons, T. P., McPherson, B. J. O. L. & Kass, M. A. (2018). Reliable noise measure in time-gated NMR data. Geophysical Journal International, 215(2), 959-964. https://doi.org/10.1093/GJI/GGY318

Raskin, G., Delabie, T., De Munter, W., Sana, H., Vandenbussche, B., Vandoren, B., Antoci, V., Kjeldsen, H., Karoff, C., De Koter, A., Désert, J. M., Mladenov, T. & Vandepitte, D. (2018). CUBESPEC: Low-cost space-based astronomical spectroscopy. In Space Telescopes and Instrumentation 2018: Optical, Infrared, and Millimeter Wave (Vol. 10698). Article 106985R SPIE - International Society for Optical Engineering. https://doi.org/10.1117/12.2314074

Munch, M. G. (2019). A Study of 8Be, 12C and 27Al with state-of-the-art Detector Arrays. Århus Universitet.

Kähler, S. & Olsen, J. (2018). Dynamic correlation for non-orthogonal reference states: Improved perturbational and variational methods. Journal of Chemical Physics, 149(14), Article 144104. https://doi.org/10.1063/1.5049706

Vilhelmsen, T. N., Christiansen, A. V., Frederiksen, R. R., Christensen, S. & Auken, E. (2018). Geofysisk kortlægning af terrænnære strukturer og deres betydning for grundvandet. Abstract from Hydrologidag 2018, Odense, Denmark. http://www.hydrologidag.dk/images/stories/Hydrologidag2018/Vilhelmsen_hydrologidagaen_2018.pdf

Vilhelmsen, T. N., Auken, E., Christiansen, A. V., Barfod, A., Foged, N., Pedersen, J. B. & Maurya, P. K. (2018). Quantification of subsurface structural uncertainty in groundwater models using 3D geophysical data. Abstract from Computational Methods in Water Resources 2018, Saint Malo, France.

Vilhelmsen, T. N., Christensen, S., Frederiksen, R. R., Auken, E., Fienen, M. N. & Leaf, A. (2018). Script based groundwater modelling for increased model flexibility and improved analysis. Abstract from 12th Annual Water Research Meeting of DWF, Lyngby, Denmark.

Vilhelmsen, T. N., Christensen, S., Frederiksen, R. R., Auken, E. & Christiansen, A. V. (2018). Gentænk grundvandsmodellering - nye metoder til effektiv modeludvikling. Abstract from ATV Vintermøde 2018, Bredsten, Denmark.

Wang, Z., Wu, H. H., Li, Q., Besenbacher, F., Zeng, X. C. & Dong, M. (2018). Self-scrolling MoS₂ metallic wires. Nanoscale, 10(38), 18178-18185. https://doi.org/10.1039/c8nr04611e

Sørensen, L. & Salbo, R. (2018). Optimized Workflow for Selecting Peptides for HDX-MS Data Analyses. Journal of The American Society for Mass Spectrometry, 29(11), 2278-2281. https://doi.org/10.1007/s13361-018-2056-1

Skydsgaard, M. A. (2018). Nekrolog. Fuldblodsforskerens heldige valg. Weekendavisen, 1.

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