Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Shogren, A. J., Tank, J. L., Egan, S. P., Bolster, D. & Riis, T. (2019). Riverine distribution of mussel environmental DNA reflects a balance among density, transport, and removal processes. Freshwater Biology, 64(8), 1467-1479. https://doi.org/10.1111/fwb.13319

Kolyaie, S., Treier, U. A., Watmough, G. R., Madsen, B., Bøcher, P. K., Psomas, A., Bösch, R. & Normand, S. (2019). Transferability and the effect of colour calibration during multi-image classification of Arctic vegetation change. Polar Biology, 42(7), 1227-1239. https://doi.org/10.1007/s00300-019-02491-7

Farhadi, A., Hajiaghayi, M. T., Larsen, K. G. & Shi, E. (2019). Lower bounds for external memory integer sorting via network coding. In M. Charikar & E. Cohen (Eds.), STOC 2019 - Proceedings of the 51st Annual ACM SIGACT Symposium on Theory of Computing (pp. 997-1008). Association for Computing Machinery. https://doi.org/10.1145/3313276.3316337

Zhang, Y., Maucher, F. M. B. M. J. & Pohl, T. (2019). Supersolidity around a Critical Point in Dipolar Bose-Einstein Condensates. Physical Review Letters, 123(1), Article 015301. https://doi.org/10.1103/PhysRevLett.123.015301

Raynolds, M. K., Walker, D. A., Balser, A., Bay, C., Campbell, M., Cherosov, M. M., Daniëls, F. J. A., Eidesen, P. B., Ermokhina, K. A., Frost, G. V., Jedrzejek, B., Jorgenson, M. T., Kennedy, B. E., Kholod, S. S., Lavrinenko, I. A., Lavrinenko, O. V., Magnússon, B., Matveyeva, N. V., Metúsalemsson, S. ... Troeva, E. (2019). A raster version of the Circumpolar Arctic Vegetation Map (CAVM). Remote Sensing of Environment, 232, Article 111297. https://doi.org/10.1016/j.rse.2019.111297

Gruber, E., Kjær, C., Nielsen, S. B. & Andersen, L. H. (2019). Intrinsic Photophysics of Light-harvesting Charge-tagged Chlorophyll a and b Pigments. Chemistry - A European Journal, 25(39), 9153-9158. https://doi.org/10.1002/chem.201901786

Møller, F. S., Fedorov, D. V., Jensen, A. S. & Zinner, N. T. (2019). Correlated Gaussian approach to anisotropic resonantly interacting few-body systems. Journal of Physics B: Atomic, Molecular and Optical Physics, 52(14), Article 145102. https://doi.org/10.1088/1361-6455/aae767

Jørgensen, K. S., Kreutzer, A., Lehtonen, K. K., Kankaanpää, H., Rytkönen, J., Wegeberg, S., Gustavson, K., Fritt-Rasmussen, J., Truu, J., Kõuts, T., Lilover, M. J., Seiler, T. B., Hollert, H., Johann, S., Marigómez, I., Soto, M., Lekube, X., Jenssen, B. M., Ciesielski, T. M. ... Wang, F. (2019). The EU Horizon 2020 project GRACE: integrated oil spill response actions and environmental effects. Environmental Sciences Europe, 31(1), Article 44. https://doi.org/10.1186/s12302-019-0227-8

Walia, V., Cuenca, A., Vetter, M., Insinna, C., Perera, S., Lu, Q., Ritt, D. A., Semler, E., Specht, S., Stauffer, J., Morrison, D. K., Lorentzen, E. & Westlake, C. J. (2019). Akt Regulates a Rab11-Effector Switch Required for Ciliogenesis. Developmental Cell, 50(2), 229-246.e7. https://doi.org/10.1016/j.devcel.2019.05.022

Hou, D., O'Connor, D., Sonne, C. & Ok, Y. S. (2019). Trade war threatens sustainability. Science (New York, N.Y.), 364(6447), 1242-1243. https://doi.org/10.1126/science.aay3596

Veillard, F., Sztukowska, M., Nowakowska, Z., Mizgalska, D., Thøgersen, I. B., Enghild, J. J., Bogyo, M., Potempa, B., Nguyen, K.-A. & Potempa, J. (2019). Proteolytic processing and activation of gingipain zymogens secreted by T9SS of Porphyromonas gingivalis. Biochimie, 166, 161-172. https://doi.org/10.1016/j.biochi.2019.06.010

Christensen, P. K., Skovgaard, C. Ø. & Petersen, M. G. (2019). Together together: Combining shared and separate activities in designing technology for family life. In Proceedings of the 18th ACM International Conference on Interaction Design and Children, IDC 2019 (pp. 374-385). Association for Computing Machinery. https://doi.org/10.1145/3311927.3323141

Ørsted, M., Hoffmann, A. A., Sverrisdóttir, E., Nielsen, K. L. & Kristensen, T. N. (2019). Genomic variation predicts adaptive evolutionary responses better than population bottleneck history. PLOS Genetics, 15(6), e1008205. Article e1008205. https://doi.org/10.1371/journal.pgen.1008205

Kjøll, H. J., Andersen, T. B., Corfu, F., Labrousse, L., Tegner, C., Abdelmalak, M. M. & Planke, S. (2019). Timing of Breakup and Thermal Evolution of a Pre-Caledonian Neoproterozoic Exhumed Magma-Rich Rifted Margin. Tectonics, 38(6), 1843-1862. https://doi.org/10.1029/2018TC005375

Svane, H. M. & Feragen, A. (2019). Reconstructing Objects from Noisy Images at Low Resolution. In D. Conte, J. Y. Ramel & P. Foggia (Eds.), Graph-Based Representations in Pattern Recognition - 12th IAPR-TC-15 International Workshop, GbRPR 2019, Proceedings: GbRPR 2019 (pp. 204-214). Springer. https://link.springer.com/chapter/10.1007/978-3-030-20081-7_20

Svane, H. M. & Plessis, A. D. (2019). Reconstruction of r-regular Objects from Trinary Images.

Karlsson, E., Andersson, E., Jones, N. C., Hoffmann, S. V., Jemth, P. & Kjærgaard, M. (2019). Coupled Binding and Helix Formation Monitored by Synchrotron-Radiation Circular Dichroism. Biophysical Journal, 117(4), 729-742. https://doi.org/10.1016/j.bpj.2019.07.014

Kristensen, L. S., Schertz Andersen, M., Stagsted, L. V. W., Ebbesen, K., Hansen, T. B. & Kjems, J. (2019). The biogenesis, biology and characterization of circular RNAs. Nature Reviews. Genetics, 20(11), 675-691. https://doi.org/10.1038/s41576-019-0158-7

Jansson, J., Mampentzidis, K., Rajaby, R. & Sung, W.-K. (2019). Computing the Rooted Triplet Distance between Phylogenetic Networks. In C. J. Colbourn, R. Grossi & N. Pisanti (Eds.), Combinatorial Algorithms - 30th International Workshop, IWOCA 2019, Proceedings (pp. 290-303). Springer.

Jansson, J., Mampentzidis, K. & Thekkumpadan Puthiyaveedu, S. (2019). Building a Small and Informative Phylogenetic Supertree. Abstract from Workshop on Algorithms in Bioinformatics (WABI) 2019, Buffalo, New York, United States.

Skov, D. S., Egholm, D. L., Jansen, J. D., Sandiford, M. & Knudsen, M. F. (2019). Detecting landscape transience with in situ cosmogenic ¹⁴C and ¹⁰Be. Quaternary Geochronology, 54, Article 101008. https://doi.org/10.1016/j.quageo.2019.101008

Thomas, S. P., Grosjean, A., Flematti, G. R., Karton, A., Sobolev, A. N., Edwards, A. J., Piltz, R. O., Iversen, B. B., Koutsantonis, G. A. & Spackman, M. A. (2019). Investigation of an Unusual Crystal Habit of Hydrochlorothiazide Reveals Large Polar Enantiopure Domains and a Possible Crystal Nucleation Mechanism. Angewandte Chemie - International Edition, 58(30), 10255-10259. https://doi.org/10.1002/anie.201905085

Timcenko, M., Lyons, J. A., Januliene, D., Ulstrup, J. J., Dieudonné, T., Montigny, C., Ash, M. R., Karlsen, J. L., Boesen, T., Kühlbrandt, W., Lenoir, G., Moeller, A. & Nissen, P. (2019). Structure and autoregulation of a P4-ATPase lipid flippase. Nature, 571(7765), 366-370. https://doi.org/10.1038/s41586-019-1344-7

Buongiorno, J., Herbert, L. C., Wehrmann, L. M., Michaud, A. B., Laufer, K., Røy, H., Jørgensen, B. B., Szynkiewicz, A., Faiia, A., Yeager, K. M., Schindler, K. & Lloyd, K. G. (2019). Complex Microbial Communities Drive Iron and Sulfur Cycling in Arctic Fjord Sediments. Applied and Environmental Microbiology, 85(14), 1-16. Article 00949-19. https://doi.org/10.1128/AEM.00949-19

Afshani, P., Freksen, C. B., Kamma, L. & Larsen, K. G. (2019). Lower bounds for multiplication via network coding. Leibniz International Proceedings in Informatics, LIPIcs, 132, Article 10. https://doi.org/10.4230/LIPIcs.ICALP.2019.10

Hayakawa, H., Willis, D. M., Hattori, K., Notsu, Y., Wild, M. N. & Karoff, C. (2019). Unaided-eye Sunspot Observations in 1769 November: A Comparison of Graphical Records in the East and the West. Solar Physics, 294, Article 95. https://doi.org/10.1007/s11207-019-1488-5

Sveinbjornsdottir, A. E., Stefánsson, A. & Heinemeier, J. (2019). O, H and C isotopic systematics of Icelandic groundwater. E3S Web of Conferences, 98, Article 07031. https://doi.org/10.1051/e3sconf/20199807031

Afshani, P. (2019). A new lower bound for semigroup orthogonal range searching. In G. Barequet & Y. Wang (Eds.), 35th International Symposium on Computational Geometry, SoCG 2019 Article 3 Dagstuhl Publishing. https://doi.org/10.4230/LIPIcs.SoCG.2019.3

Pedersen, M. & Chong, S. (2019). Programming with Flow-Limited Authorization: Coarser is Better. In Proceedings - 4th IEEE European Symposium on Security and Privacy, EURO S and P 2019 (pp. 63-78). Article 8806736 IEEE. https://doi.org/10.1109/EuroSP.2019.00015

Rønn-Nielsen, A. & Vedel Jensen, E. B. (2019). Central limit theorem for mean and variogram estimators in Lévy-based models. Journal of Applied Probability, 56(1), 209-222. https://doi.org/10.1017/jpr.2019.14

Pedersen, M. & Askarov, A. (2019). Static Enforcement of Security in Runtime Systems. In Proceedings - 2019 IEEE 32nd Computer Security Foundations Symposium, CSF 2019 (pp. 335-350). Article 8823712 IEEE. https://doi.org/10.1109/CSF.2019.00030

González, J. A., Hahn, U. & Mateu, J. (2020). Analysis of tornado reports through replicated spatio-temporal point patterns. Journal of the Royal Statistical Society, Series C (Applied Statistics), 69(1), 3-23. https://doi.org/10.1111/rssc.12375

Holm-Jensen, T. & Hansen, T. M. (2020). Linear Waveform Tomography Inversion Using Machine Learning Algorithms. Mathematical Geosciences, 52(1), 31-51. https://doi.org/10.1007/s11004-019-09815-7

Hansen, T. M. & Minsley, B. J. (2019). Inversion of airborne EM data with an explicit choice of prior model. Geophysical Journal International, 218(2), 1348-1366. https://doi.org/10.1093/gji/ggz230

Derekas, A., Murphy, S. J., Dálya, G., Szabó, R., Borkovits, T., Bókon, A., Lehmann, H., Kinemuchi, K., Southworth, J., Bloemen, S., Csák, B., Isaacson, H., Kovács, J., Shporer, A., Szabó, G. M., Thygesen, A. O. & Mészáros, S. (2019). Spectroscopic confirmation of the binary nature of the hybrid pulsator KIC 5709664 found with the frequency modulation method. Monthly Notices of the Royal Astronomical Society, 486(2), 2129-2136. https://doi.org/10.1093/mnras/stz875

Poorter, L., Rozendaal, D. M. A., Bongers, F., de Almeida-Cortez, J. S., Almeyda Zambrano, A. M., Álvarez, F. S., Andrade, J. L., Villa, L. F. A., Balvanera, P., Becknell, J. M., Bentos, T. V., Bhaskar, R., Boukili, V., Brancalion, P. H. S., Broadbent, E. N., César, R. G., Chave, J., Chazdon, R. L., Colletta, G. D. ... Westoby, M. (2019). Wet and dry tropical forests show opposite successional pathways in wood density but converge over time. Nature Ecology & Evolution, 3(6), 928-934. https://doi.org/10.1038/s41559-019-0882-6

Tsitsulin, A., Mottin, D., Karras, P., Bronstein, A. & Müller, E. (2019). Spectral graph complexity. In L. Liu & R. White (Eds.), The Web Conference 2019 - Companion of the World Wide Web Conference, WWW 2019 (pp. 308-309). Association for Computing Machinery. https://doi.org/10.1145/3308560.3316589

Gandolfi, D., Fossati, L., Livingston, J. H., Stassun, K. G., Grziwa, S., Barragán, O., Fridlund, M., Kubyshkina, D., Persson, C. M., Dai, F., Lam, K. W. F., Albrecht, S., Batalha, N., Beck, P. G., Justesen, A. B., Cabrera, J., Cartwright, S., Cochran, W. D., Csizmadia, S. ... Vezie, M. L. (2019). The Transiting Multi-planet System HD15337: Two Nearly Equal-mass Planets Straddling the Radius Gap. Astrophysical Journal Letters, 876(2), Article L24. https://doi.org/10.3847/2041-8213/ab17d9

Brudy, F., Holz, C., Rädle, R., Wu, C. J., Houben, S., Klokmose, C. N. & Marquardt, N. (2019). Cross-device taxonomy: Survey, opportunities and challenges of interactions spanning across multiple devices. In CHI 2019 - Proceedings of the 2019 CHI Conference on Human Factors in Computing Systems Association for Computing Machinery. https://doi.org/10.1145/3290605.3300792

Spiel, K., Walker, A. M., DeVito, M. A., Birnholtz, J., Barlas, P., Ahmed, A., Brubaker, J. R., Keyes, O., Brulé, E., Light, A., Hardy, J., Rode, J. A. & Kannabiran, G. (2019). Queer(ing) HCI: Moving forward in theory and practice. In CHI EA 2019 - Extended Abstracts of the 2019 CHI Conference on Human Factors in Computing Systems Article 3311750 Association for Computing Machinery. https://doi.org/10.1145/3290607.3311750

Coronado-Zamora, M., Salvador-Martınez, I., Castellano, D., Barbadilla, A. & Salazar-Ciudad, I. (2019). Adaptation and conservation throughout the drosophila melanogaster life-cycle. Genome Biology and Evolution, 11(5), 1463-1482. https://doi.org/10.1093/gbe/evz086

Chontos, A., Huber, D., Latham, D. W., Bieryla, A., Eylen, V. V., Bedding, T. R., Berger, T., Buchhave, L. A., Campante, T. L., Chaplin, W. J., Colman, I. L., Coughlin, J. L., Davies, G., Hirano, T., Howard, A. W. & Isaacson, H. (2019). The Curious Case of KOI 4: Confirming Kepler's First Exoplanet Detection. Astronomical Journal, 157(5), Article 192. https://doi.org/10.3847/1538-3881/ab0e8e

Jørgensen, A. C. S., Weiss, A., Angelou, G. & Aguirre, V. S. (2019). Mending the structural surface effect of 1D stellar structure models with non-solar metallicities based on interpolated 3D envelopes. Monthly Notices of the Royal Astronomical Society, 484(4), 5551-5567. https://doi.org/10.1093/mnras/stz337

Yan, Y., Liu, Q., Zhang, Q., Ding, Y. & Li, Y. (2019). Adaptation of dominant species to drought in the inner mongolia grassland – species level and functional type level analysis. Frontiers in Plant Science, 10, Article 231. https://doi.org/10.3389/fpls.2019.00231

Müller, B., Tauris, T. M., Heger, A., Banerjee, P., Qian, Y. Z., Powell, J., Chan, C., Gay, D. W. & Langer, N. (2019). Three-dimensional simulations of neutrino-driven core-collapse supernovae from low-mass single and binary star progenitors. Monthly Notices of the Royal Astronomical Society, 484(3), 3307-3324. https://doi.org/10.1093/mnras/stz216

Hjorth, M., Justesen, A. B., Hirano, T., Albrecht, S., Gandolfi, D., Dai, F., Alonso, R., Barragán, O., Esposito, M., Kuzuhara, M., Lam, K. W. F., Livingston, J. H., Montanes-Rodriguez, P., Narita, N., Nowak, G., Prieto-Arranz, J., Redfield, S., Rodler, F., Van Eylen, V. ... Trifonov, T. (2019). K2-290: A warm Jupiter and a mini-Neptune in a triple-star system. Monthly Notices of the Royal Astronomical Society, 484(3), 3522-3536. https://doi.org/10.1093/mnras/stz139

Triki, H., Nagy, B., Overgaard, J., Jensen, F. & Kamoun, S. (2020). Structure, DFT based investigations on vibrational and nonlinear optical behavior of a new guanidinium cobalt thiocyanate complex. Structural Chemistry, 31(1), 103-114. https://doi.org/10.1007/s11224-019-01380-3

Logins, A., Karras, P. & Jensen, C. S. (2019). Multicapacity facility selection in networks. In Proceedings - 2019 IEEE 35th International Conference on Data Engineering, ICDE 2019 (pp. 794-805). Article 8731341 IEEE. https://doi.org/10.1109/ICDE.2019.00076

Li, Y., Fan, J., Ovchinnikov, G. & Karras, P. (2019). Maximizing multifaceted network influence. In Proceedings - 2019 IEEE 35th International Conference on Data Engineering, ICDE 2019 (pp. 446-457). Article 8731520 IEEE. https://doi.org/10.1109/ICDE.2019.00047

Chaplin, W. J., Cegla, H. M., Watson, C. A., Davies, G. R. & Ball, W. H. (2019). Filtering Solar-Like Oscillations for Exoplanet Detection in Radial Velocity Observations. Astronomical Journal, 157(4), Article 163. https://doi.org/10.3847/1538-3881/ab0c01

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