Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Coll Macià, M., Skov, L., Peter, B. M. & Schierup, M. H. (2021). Different historical generation intervals in human populations inferred from Neanderthal fragment lengths and patterns of mutation accumulation. bioRxiv. https://doi.org/10.1101/2021.02.25.432907

Jensen, L. G., Williamson, D. & Hahn, U. (2022). Semiparametric point process modeling of blinking artifacts in PALM. The Annals of Applied Statistics, 16(3), 1500-1523. https://doi.org/10.1214/21-AOAS1553

Holst, M. R., Jensen, L. G., Aaron, J., Login, F. H., Rajkumar, S., Hahn, U. & Nejsum, L. N. (2021). Regulated exocytosis: Renal Aquaporin-2 3D Vesicular Network Organization and Association with F-actin. American Journal of Physiology: Cell Physiology, 321(6), C1060-C1069. https://doi.org/10.1152/ajpcell.00255.2021

Borowski, M. & Larsen-Ledet, I. (2021). Lessons Learned from Using Reprogrammable Prototypes with End-User Developers. In D. Fogli, D. Tetteroo, B. R. Barricelli, S. Borsci, P. Markopoulos & G. A. Papadopoulos (Eds.), End-User Development - 8th International Symposium, IS-EUD 2021, Proceedings: 8th International Symposium, IS-EUD 2021, Virtual Event, July 6–8, 2021, Proceedings (pp. 136–152). Springer. https://doi.org/10.1007/978-3-030-79840-6_9

Jamison-Daniels, S. L., Kissling, W. D., Botha, M., Harris, M. A., Gordon, C. E. & Greve, M. (2021). The role of deterministic succession during forest development within a southern African savanna. Biotropica, 53(2), 466-476. https://doi.org/10.1111/btp.12890

Mermet-Joret, N., Capogna, M. & Nabavi, S. (2021). Fear Memory Relapse: The Importance of Input Associativity. Trends in Neurosciences, 44(5), 337-339. https://doi.org/10.1016/j.tins.2021.02.006

Kiderlen, M. & Pausinger, F. (2021). Discrepancy of stratified samples from partitions of the unit cube. Monatshefte fur Mathematik, 195(2), 267-306. https://doi.org/10.1007/s00605-021-01538-4

Lerner, E., Barth, A., Hendrix, J., Ambrose, B., Birkedal, V., Blanchard, S. C., Börner, R., Chung, H. S., Cordes, T., Craggs, T. D., Deniz, A. A., Diao, J., Fei, J., Gonzalez, R. L., Gopich, I. V., Ha, T., Hanke, C. A., Haran, G., Hatzakis, N. S. ... Weiss, S. (2021). FRET-based dynamic structural biology: Challenges, perspectives and an appeal for open-science practices. eLife, 10, Article 60416. https://doi.org/10.7554/eLife.60416

Lykke-Andersen, S., Žumer, K., Molska, E. Š., Rouvière, J. O., Wu, G., Demel, C., Schwalb, B., Schmid, M., Cramer, P. & Jensen, T. H. (2021). Integrator is a genome-wide attenuator of non-productive transcription. Molecular Cell, 81(3), 514-529.e6. https://doi.org/10.1016/j.molcel.2020.12.014

Malecka, K., Mikuła, E. & Ferapontova, E. E. (2021). Design strategies for electrochemical aptasensors for cancer diagnostic devices. Sensors (Switzerland), 21(3), Article 736. https://doi.org/10.3390/s21030736

Compte, M., Harwood, S. L., Martínez-Torrecuadrada, J., Perez-Chacon, G., González-García, P., Tapia-Galisteo, A., Van Bergen en Henegouwen, P. M. P., Sánchez, A., Fabregat, I., Sanz, L., Zapata, J. M. & Alvarez-Vallina, L. (2021). Case Report: An EGFR-Targeted 4-1BB-agonistic Trimerbody Does Not Induce Hepatotoxicity in Transgenic Mice With Liver Expression of Human EGFR. Frontiers in Immunology, 11, Article 614363. https://doi.org/10.3389/fimmu.2020.614363

Finkelstein, R., Lahad, O., Cohen, I., Davidson, O., Kiriati, S., Poem, E. & Firstenberg, O. (2021). Continuous Protection of a Collective State from Inhomogeneous Dephasing. Physical Review X, 11(1), Article 011008. https://doi.org/10.1103/PhysRevX.11.011008

Tkadlec, J., Pavlogiannis, A., Chatterjee, K. & Nowak, M. A. (2021). Fast and strong amplifiers of natural selection. Nature Communications, 12(1), Article 4009. https://doi.org/10.1038/s41467-021-24271-w

Palmer, M. H., Hoffmann, S. V., Jones, N. C., Coreno, M., De Simone, M., Grazioli, C. & Aitken, R. A. (2021). The vacuum ultraviolet absorption spectrum of norbornadiene: Vibrational analysis of the singlet and triplet valence states of norbornadiene by configuration interaction and density functional calculations. The Journal of Chemical Physics, 155(3), Article 034308. https://doi.org/10.1063/5.0053962

Chatterjee, K., Ibsen-Jensen, R. & Pavlogiannis, A. (2021). Faster algorithms for quantitative verification in bounded treewidth graphs. Formal Methods in System Design, 57(3), 401-428. https://doi.org/10.1007/s10703-021-00373-5

Zheng, X., Schovsbo, N. H., Bian, L., Luo, Q., Zhong, N., Rudra, A., Goodarzi, F. & Sanei, H. (2021). Alteration of organic macerals by uranium irradiation in lower Paleozoic marine shales. International Journal of Coal Geology, 239, Article 103713. https://doi.org/10.1016/j.coal.2021.103713

Zhou, L., Fan, H. & Ulrich, T. (2021). Editorial for special issue “Critical metals in hydrothermal ores: Resources, recovery, and challenges”. Minerals, 11(3), 1-5. Article 299. https://doi.org/10.3390/min11030299

Kuang, Y. F., Yue, L., Balslev, H. & Liao, J. P. (2021). Pollen development in three selected species of Rubiaceae provides ontogenetic evidence for pollen evolution. Review of Palaeobotany and Palynology, 289, Article 104413. https://doi.org/10.1016/j.revpalbo.2021.104413

Thøgersen, J., Vaida, V., Bregnhøj, M., Weidner, T. & Jensen, F. (2021). The primary photo-dissociation dynamics of lactate in aqueous solution: decarboxylation prevents dehydroxylation. Physical Chemistry Chemical Physics, 23(8), 4555-4568. https://doi.org/10.1039/d0cp05650b

Mendes, R. G., Ta, H. Q., Yang, X., Bachmatiuk, A., Praus, P., Mamakhel, A., Iversen, B. B., Su, R., Gemming, T. & Rümmeli, M. H. (2021). Tailoring the stoichiometry of C₃N₄nanosheets under electron beam irradiation. Physical Chemistry Chemical Physics, 23(8), 4747-4756. https://doi.org/10.1039/d0cp06518h

Ahmadov, U., Bendikas, M. M., Ebbesen, K. K., Sehested, A. M., Kjems, J., Broholm, H. & Kristensen, L. S. (2021). Distinct circular RNA expression profiles in pediatric ependymomas. Brain Pathology, 31(2), 387-392. https://doi.org/10.1111/bpa.12922

Rattan, S. & Kaur, G. (Eds.) (2021). Nutrition, Food and Diet in Ageing and Longevity. Springer. Healthy Ageing and Longevity Vol. 14 https://doi.org/10.1007/978-3-030-83017-5

Zelikin, A. N. & Stellacci, F. (2021). Broad-Spectrum Antiviral Agents Based on Multivalent Inhibitors of Viral Infectivity. Advanced Healthcare Materials, 10(6), Article 2001433. https://doi.org/10.1002/adhm.202001433

Sandby, L. M., Mejdahl, J. E. B., Bjerregaard, S. H., Melvad, C. & Rysgaard, S. (2021). A cost-efficient low-weight autonomous profiler for measurements in polar coastal waters and other regions with strong density gradients. HardwareX, 10, Article e00207. https://doi.org/10.1016/j.ohx.2021.e00207

Milanetti, E., Miotto, M., Di Rienzo, L., Nagaraj, M., Monti, M., Golbek, T. W., Gosti, G., Roeters, S. J., Weidner, T., Otzen, D. E. & Ruocco, G. (2021). In-Silico Evidence for a Two Receptor Based Strategy of SARS-CoV-2. Frontiers in Molecular Biosciences, 8, Article 690655. https://doi.org/10.3389/fmolb.2021.690655

Arkhipov, S. & Ørsted, S. (2021). Homotopy limits in the category of dg-categories in terms of A_∞-comodules. European Journal of Mathematics, 7(2), 671-705. https://doi.org/10.1007/s40879-020-00439-4

Nijman, T. P. A., Davidson, T. A., Weideveld, S. T. J., Audet, J., Esposito, C., Levi, E. E., Ho, A., Lamers, L. P. M., Jeppesen, E. & Veraart, A. J. (2021). Warming and eutrophication interactively drive changes in the methane-oxidizing community of shallow lakes. ISME Communications, 1, Article 32. https://doi.org/10.1038/s43705-021-00026-y

Bautista, N. M., Damsgaard, C., Fago, A. & Wang, T. (2021). Carbon dioxide and bicarbonate accumulation in caiman erythrocytes during diving. Journal of Experimental Biology, 224(9), Article 242435. https://doi.org/10.1242/jeb.242435

Jensen, B. S., Pardue, S., Duffy, B., Kevil, C. G., Staples, J. F. & Fago, A. (2021). Suppression of mitochondrial respiration by hydrogen sulfide in hibernating 13-lined ground squirrels. Free Radical Biology and Medicine, 169, 181-186. https://doi.org/10.1016/j.freeradbiomed.2021.04.009

Michaelsen, J., Fago, A. & Bundgaard, A. (2021). High temperature impairs mitochondrial function in rainbow trout cardiac mitochondria. Journal of Experimental Biology, 224(9), Article jeb242382. https://doi.org/10.1242/jeb.242382

Nielsen, K. K., Bastarrachea-Magnani, M. A., Pohl, T. & Bruun, G. M. (2021). Spatial structure of magnetic polarons in strongly interacting antiferromagnets. Physical Review B, 104(15), Article 155136 . https://doi.org/10.1103/PhysRevB.104.155136

Rohde, P. D., Kristensen, T. N., Sarup, P., Muñoz, J. & Malmendal, A. (2021). Prediction of complex phenotypes using the Drosophila melanogaster metabolome. Heredity, 126(5), 717-732. https://doi.org/10.1038/s41437-021-00404-1

Souza, P. E., Sohbati, R., Murray, A. S., Clemmensen, L. B., Kroon, A. & Nielsen, L. (2021). Optical dating of cobble surfaces determines the chronology of Holocene beach ridges in Greenland. Boreas, 50(2), 606-618. https://doi.org/10.1111/bor.12507

Pedersen, D. V., Pedersen, M. N., Mazarakis, S. M. M., Wang, Y., Lindorff-Larsen, K., Arleth, L. & Andersen, G. R. (2021). Properdin oligomers adopt rigid extended conformations supporting function. eLife, 10, Article e63356. https://doi.org/10.7554/eLife.63356

Muyle, A., Martin, H., Zemp, N., Mollion, M., Gallina, S., Tavares, R., Silva, A., Bataillon, T., Widmer, A., Glémin, S., Touzet, P. & Marais, G. A. B. (2021). Dioecy Is Associated with High Genetic Diversity and Adaptation Rates in the Plant Genus Silene. Molecular Biology and Evolution, 38(3), 805-818. https://doi.org/10.1093/molbev/msaa229

Schindler, S. (2022). Theoretical Virtues: do scientists think what philosophers think they ought to think? Philosophy of Science, 89(3), 542-564. https://doi.org/10.1017/psa.2021.40

Schindler, S. & Saint-Germier, P. (2024). Armchair physics and the method of cases. Inquiry, 67(1), 330-354. https://doi.org/10.1080/0020174X.2021.1899985

Taghizadeh-Toosi, A., Janz, B., Labouriau, R., Olesen, J. E., Butterbach-Bahl, K. & Petersen, S. O. (2021). Nitrous oxide emissions from red clover and winter wheat residues depend on interacting effects of distribution, soil N availability and moisture level. Plant and Soil, 466(1-2), 121-138. https://doi.org/10.1007/s11104-021-05030-8

Ghanta, R. (2021). Ground state of the polaron hydrogenic atom in a strong magnetic field. Journal of Mathematical Physics, 62(3), Article 031901. https://doi.org/10.1063/5.0012192

Taniguchi, S., Bertl, J., Futschik, A., Kishino, H. & Okazaki, T. (2021). Waves Out of the Korean Peninsula and Inter- and Intra-Species Replacements in Freshwater Fishes in Japan. Genes, 12(2). https://doi.org/10.3390/genes12020303

Vosegaard, T. (2021). Single-crystal NMR spectroscopy. Progress in Nuclear Magnetic Resonance Spectroscopy, 123, 51-72. https://doi.org/10.1016/j.pnmrs.2021.01.001

Björnsdotter, E., Nadzieja, M., Chang, W., Escobar-Herrera, L., Mancinotti, D., Angra, D., Xia, X., Tacke, R., Khazaei, H., Crocoll, C., Vandenberg, A., Link, W., Stoddard, F. L., O'Sullivan, D. M., Stougaard, J., Schulman, A. H., Andersen, S. U. & Geu-Flores, F. (2021). VC1 catalyses a key step in the biosynthesis of vicine in faba bean. Nature Plants, 7(7), 923-931. https://doi.org/10.1038/s41477-021-00950-w

Nielsen, S. S. F., Vibholm, L. K., Johannsen, I. M., Olesen, R., Frattari, G., Pahus, M. H., Højen, J. F., Damsgaard Gunst, J., Erikstrup, C., Holleufer, A., Hartmann, R., Østergaard, L. J., Søgaard, O. S., Schleimann, M. H. & Tolstrup, M. (2021). SARS-CoV-2 elicits robust adaptive immune responses regardless of disease severity. EBioMedicine, 68, Article 103410. https://doi.org/10.1016/j.ebiom.2021.103410

Jantawongsri, K., Nørregaard, R. D., Bach, L., Dietz, R., Sonne, C., Jørgensen, K., Lierhagen, S., Ciesielski, T. M., Jenssen, B. M., Haddy, J., Eriksen, R. & Nowak, B. (2021). Histopathological effects of short-term aqueous exposure to environmentally relevant concentration of lead (Pb) in shorthorn sculpin (Myoxocephalus scorpius) under laboratory conditions. Environmental Science and Pollution Research, 28(43), 61423-61440. https://doi.org/10.1007/s11356-021-14972-6

Carver, S., Convery, I., Hawkins, S., Beyers, R., Eagle, A., Kun, Z., Van Maanen, E., Cao, Y., Fisher, M., Edwards, S. R., Nelson, C., Gann, G. D., Shurter, S., Aguilar, K., Andrade, A., Ripple, W. J., Davis, J., Sinclair, A., Bekoff, M. ... Soulé, M. (2021). Guiding principles for rewilding. Conservation Biology, 35(6), 1882-1893. https://doi.org/10.1111/cobi.13730

Hersh, T. A., Gero, S., Rendell, L. & Whitehead, H. (2021). Using identity calls to detect structure in acoustic datasets. Methods in Ecology and Evolution, 12(9), 1668-1678. https://doi.org/10.1111/2041-210X.13644

Sunde, P., Collet, S., Nowak, C., Thomsen, P. F., Hansen, M. M., Schulz, B., Matzen, J., Michler, F. U., Vedel-Smith, C. & Olsen, K. (2021). Where have all the young wolves gone? Traffic and cryptic mortality create a wolf population sink in Denmark and northernmost Germany. Conservation Letters, 14(5), Article e12812. https://doi.org/10.1111/conl.12812

Sikter, A. & Sonne, C. (2021). A new hypothesis on vascular calcifi cation: the exhausting buff er syndrome (EBS). Neuropsychopharmacologia Hungarica, 23(1), 215-220. https://mppt.hu/magazin/pdf/vol23issue1/v23i1p215.pdf

Meeboonya, R., Ngernsaengsaruay, C. & Balslev, H. (2021). Dolichos kongkandae sp. nov. and lectotypification of D. fragrans (Leguminosae, Papilionoideae) from Asia. Phytokeys, 175, 55-65. https://doi.org/10.3897/phytokeys.175.57759

Andersen, J. C., Havill, N. P., Griffin, B. P., Jepsen, J. U., Hagen, S. B., Klemola, T., Barrio, I. C., Kjeldgaard, S. A., Høye, T. T., Murlis, J., Baranchikov, Y. N., Selikhovkin, A. V., Vindstad, O. P. L., Caccone, A. & Elkinton, J. S. (2021). Northern Fennoscandia via the British Isles: evidence for a novel postglacial recolonization route by winter moth (Operophtera brumata). Frontiers of Biogeography, 13(1), 1-14. https://doi.org/10.21425/F5FBG49581

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