Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Peña-Díaz, S. & Ventura, S. (2024). The small molecule ZPD-2 inhibits the aggregation and seeded polymerisation of C-terminally truncated α-Synuclein. FEBS journal, 291(23), 5290-5304. https://doi.org/10.1111/febs.17310

Peña Díaz, S., Zhang, Z., Jiang, Y., Daugberg, A. O. H., López Hernández, M., Nielsen, J., Dueholm, M. K. D., Dong, MD., Pedersen, J. S., Otzen, D. E. & Wang, H. (2025). Natural Design of a Stabilized Cross-β Fold: Structure of the FuA FapC from Pseudomonas Sp. UK4 Reveals a Critical Role for Stacking of Imperfect Repeats. Advanced Materials, 37(34), Article 2505503. https://doi.org/10.1002/adma.202505503

Søndergaard, H. A., Linneberg, M. S., Schaper, S., Pollach, I. & Kristensen, J. A. (2025). Beyond compliance: Innovation in corporate biodiversity strategies. Abstract from R&D Management Conference 2025, Pisa, Italy.

Wüest, S., Buczkowski, J., Jones, N. C., Hoffmann, S. V., Fischer, P. & Wooster, T. J. (2025). Plant vs Dairy protein stabilised cappuccino foams: how protein and hydrocolloid conformational changes affect foam stability. Food Hydrocolloids, 169, Article 111621. https://doi.org/10.1016/j.foodhyd.2025.111621

Randi, P. A. S., Bettega, M. H. F., Jones, N. C., Hoffmann, S. V., Zuin, L., Macdonald, M., Mason, N. J., Smialek, M. A. & Limao-Vieira, P. (2025). Ring strain integrity in the absorption spectrum of β-propiolactone: VUV spectroscopy in the photon energy 4.6–10.8 eV. Journal of Photochemistry and Photobiology, A: Chemistry, 469, Article 116573. https://doi.org/10.1016/j.jphotochem.2025.116573

Jin, Z., Olsen, W. P., Mörman, C., Leppert, A., Kumar, R., Møllebjerg, A., Nielsen, L. G., Moshynets, O. V., Frasinyuk, M. S., Elosua, J. Y., Ferreira, D., Abelein, A., Landreh, M., Knight, S. D., Johansson, J., Otzen, D. E. & Chen, G. (2025). Helicobacter pylori CagA protein is a potent and broad-spectrum amyloid inhibitor. Science Advances, 11(24), Article eads7525. https://doi.org/10.1126/sciadv.ads7525

Esperon-Rodriguez, M., Gallagher, R. V., Russo, A., Power, S. A., Calaza-Martínez, P., Capela Lourenço, T., Cariñanos, P., Eleuterio, A. A., Guo, Z., Lee, G., Masselot, P., Mcdonald, R. I., Messier, C., Ordoñez, C., Parpanchi, M., Schifanella, R., Shackleton, C., Sharmin, M., Solfjeld, I. ... Tjoelker, M. G. (2025). Global trends in urban forest irrigation: Environmental influences, challenges and opportunities for sustainable practices across 109 cities worldwide. Sustainable Cities and Society, 130, Article 106510. https://doi.org/10.1016/j.scs.2025.106510

Søndergaard, J., Elberling, B., Sonne, C., Larsen, M. M. & Dietz, R. (2025). Stable isotopes unveil ocean transport of legacy mercury into Arctic food webs. Nature Communications, 16, Article 5135. https://doi.org/10.1038/s41467-025-60356-6

Chang, Y., Cheng, Y., Jia, R., Wang, R., Xu, Q., Gong, L., Wei, Y., Tang, B., Guo, C., Sun, B., He, X., Li, X., Gong, L., Ye, H., Wang, X., Dai, Y., Dong, M., Tang, Y., Zhang, F. ... Pan, T. (2025). Unified iontronic sensing for operando monitoring of physical-chemical events in lithium-ion batteries. National Science Review, 12(6), Article nwaf151. https://doi.org/10.1093/nsr/nwaf151

Gkikopoulou, K. C., Gillespie, D. M., Johnson, M., Aguilar de Soto, N., Tyack, P. L. & Marques, T. A. (2025). Sensitivity of density estimates to off-axis beam pattern assumptions in deep-diving odontocetes. Journal of the Acoustical Society of America, 157(6), 4002-4016. https://doi.org/10.1121/10.0036810

Amir, G., Heydenreich, M. & Hirsch, C. (2025). Planar reinforced k-out percolation. Stochastic Processes and Their Applications, 189, Article 104706. https://doi.org/10.1016/j.spa.2025.104706

Sumanon, P., Eiserhardt, W. L., Balslev, H. & Utteridge, T. M. A. (2025). A synopsis of the genus Maesa (Primulaceae) in New Guinea. Kew Bulletin, 80(2), 221-269. https://doi.org/10.1007/s12225-024-10164-w

Petersen, H. I. & Sanei, H. (2025). The H/C Molar Ratio and Its Potential Pitfalls for Determining Biochar's Permanence. Global change biology. Bioenergy, 17(6), Article e70049. https://doi.org/10.1111/gcbb.70049

Fenollosa, E., Pang, S. E. H., Briscoe, N. J., Guisan, A. & Salguero-Gómez, R. (2025). Powerful yet challenging: mechanistic niche models for predicting invasive species potential distribution under climate change. Ecography. Advance online publication. https://doi.org/10.1002/ecog.07775

Thorup, P. S., Stubkjær, R. B., Huynh, K.-K., Ventrapati, P., Vosegaard, E. S., Borup, A. B. & Iversen, B. B. (2025). Structural origins of ultralow glass-like thermal conductivity in AgGaGe₃Se₈. Science Advances, 11(24), Article eadv5865. https://doi.org/10.1126/sciadv.adv5865

Paasch, T. P., Olesen, M. T. J., García-Rodríguez, J. L., Assmus, A. M., Fenton, R. A., Kjems, J., Hager, H. & Kristensen, L. S. (2025). ciRS-7 expression is epigenetically regulated in cancer cells across human adenocarcinomas. PLoS Genetics, 21(6), Article e1011726. https://doi.org/10.1371/journal.pgen.1011726

Korsgaard, U., Kristensen, M. P., García-Rodríguez, J. L., Kjær-Frifeldt, S., Lindebjerg, J., Hansen, T. F., Kjems, J., Hager, H. & Kristensen, L. S. (2025). The prognostic potential of RNA in stage II colon cancer: Insights from a screened multicenter population-based cohort study. International Journal of Cancer, 157(8), 1746-1755. https://doi.org/10.1002/ijc.35507

Kumar, S., Mallesham, K. & Singh, S. K. (2026). Subconvex bound for GL(3) × GL(2) L-functions: GL(3)-spectral aspect. Forum Mathematicum, 38(2), 361-393. https://doi.org/10.1515/forum-2023-0089

Wheeler, T., Ravishankar, S., Wrede, C., Andalib, A., Anthony, A., Ayyad, Y., Jain, B., Jaros, A., Mahajan, R., Schaedig, L., Adams, A., Ahn, S., Allmond, J. M., Bardayan, D., Bazin, D., Bosmpotinis, K., Budner, T., Carmichael, S. R., Cha, S. M. ... Weghorn, L. E. (2025). Object detection with deep learning for rare event search in the GADGET II TPC. Nuclear Instruments and Methods in Physics Research, Section A: Accelerators, Spectrometers, Detectors and Associated Equipment, 1080, Article 170659. https://doi.org/10.1016/j.nima.2025.170659

Rikvold, P., K. Johnsen, K., Chokyu Del Rey, Y., Knap, I., Holz, C., Meyer, R. L., Jørgensen, M. R. & Schlafer, S. (2025). A randomized controlled trial on the effect of multiple-enzyme treatment on the microbial plaque composition. Caries Research, 59, 321. https://doi.org/10.1159/000546564

Fabbrizio, P., Baindoor, S., Margotta, C., Su, J., Morrissey, E. P., Woods, I., Hogg, M. C., Vianello, S., Venø, M. T., Kjems, J., Sorarù, G., Bendotti, C., Prehn, J. H. M. & Nardo, G. (2025). Protective role of Angiogenin in muscle regeneration in amyotrophic lateral sclerosis: Diagnostic and therapeutic implications. Brain Pathology, 35(4), Article e13328. https://doi.org/10.1111/bpa.13328

Heerten, N., Hirsch, C. & Otto, M. (2025). Moderate deviations for weight-dependent random connection models. Journal of Applied Probability, 62(4), 1406-1428. https://doi.org/10.1017/jpr.2025.13

Schlafer, S., K. Johnsen, K., Chokyu Del Rey, Y., Meyer, R. L., Skov Hansen, L. B., Knap, I., Holz, C., Jørgensen, M. R. & Rikvold, P. (2025). A randomized controlled trial on the effect of multiple-enzyme treatment on the microbial plaque composition. Poster session presented at ORCA: 72nd Congress of the European Organization for Caries Research, Leeds, United Kingdom.

Bregnhøj, M., Wili, N., Nielsen, A. B., Jensen, S. J. K., Nørnberg, P., Nielsen, N. C., Skibsted, J. & Finster, K. (2025). Triboelectrically Mediated Surface Reduction of Quartz Sand by Tumbling in Hydrogen Gas. Journal of Physical Chemistry C, 129(24), 10900-10910. https://doi.org/10.1021/acs.jpcc.5c02082

Chokyu Del Rey, Y., Rikvold, P., Lund, M. B., Raittio, E., Schramm, A., Meyer, R. L. & Schlafer, S. (2025). Arginine mitigates pH drops and modulates the composition and architecture of biofilms from caries-active patients. Abstract from ORCA: 72nd Congress of the European Organization for Caries Research, Leeds, United Kingdom.

Sun, L. J., Dopfer, J., Adams, A., Wrede, C., Banerjee, A., Brown, B. A., Chen, J., Jensen, E. A. M., Mahajan, R., Rauscher, T., Sumithrarachchi, C., Weghorn, L. E., Weisshaar, D. & Wheeler, T. (2025). Extension of the particle x-ray coincidence technique: The lifetimes and branching ratios apparatus. Physical Review C, 111(5), Article 055806. https://doi.org/10.1103/PhysRevC.111.055806

Kristoffersen, E. L., McRae, E. K. S., Sørensen, N. R., Holliger, P. & Andersen, E. S. (2025). Roles of dimeric intermediates in RNA-catalyzed rolling circle synthesis. Nucleic Acids Research, 53(11), Article gkaf057. https://doi.org/10.1093/nar/gkaf057

Laursen, S. F., Nielsen, H. M., Bahrndorff, S., Sahana, G., Sørensen, J. G., Kristensen, T. N. & Hansen, L. S. (2025). Multi-trait pedigree-based selective breeding to optimise farmed insects: Evidence from a house fly population. Journal of Insects as Food and Feed, 11(16), 3017-3032. https://doi.org/10.1163/23524588-bja10247

Chen, M., Wang, G., Ma, B., Musat, N., Shen, P., Wei, Z., Wei, Y., Richnow, H. H. & Zhang, J. (2025). Deciphering the transfer of antimicrobial resistance genes in the urban water cycle from water source to reuse: a review. Environment International, 201, Article 109584. https://doi.org/10.1016/j.envint.2025.109584

Johansen, M. B., Juncker von Buchwald, T., Iuel Lunøe Dünweber, P. G., Olsen, L. H., Hillers-Bendtsen, A. E., Kjeldal, F. I., Olsen, J., Jørgensen, P. & Mikkelsen, K. V. (2025). Cluster perturbation theory: XII. Parallel implementation of variational excitation energy series for the coupled cluster singles and doubles model. Journal of Chemical Physics, 162(21), Article 214110. https://doi.org/10.1063/5.0271032

Ho, T. A. T., Pedersen, J. B., Aagaard, A., Schou, M. F., Bechsgaard, J., Corcoran, D., Jørgensen, T. H., Normand, S. & Bilde, T. (2025). Gene Flow Disruption and Population Declines in a Soil Arthropod in Fragmented Habitats. Molecular Ecology, 34(23), Article e17820. https://doi.org/10.1111/mec.17820

Out, W., Olsen, J. & Andersen, N. H. (2025). Wood exploitation in northern Europe during the Early Neolithic: The case study of the Funnel Beaker site of Frydenlund, ca. 3600 BCE. Journal of Archaeological Science: Reports, 66, Article 105255. https://doi.org/10.1016/j.jasrep.2025.105255

Zhang, C., Reid, K., Schierup, M. H., Wang, H., Candolin, U. & Merilä, J. (2025). Rate of de novo mutations in the three-spined stickleback. Heredity, 134(7), 387-395. https://doi.org/10.1038/s41437-025-00767-9

Tang, A. A., Gobry, M. V., Li, S., Andersen, E. S. & Franco, E. (2025). Switchable RNA motifs for dynamic transcriptional control of RNA condensates. Nucleic Acids Research, 53(12), Article gkaf497. https://doi.org/10.1093/nar/gkaf497

Ogutu, J. O., Stabach, J. A., Hopcraft, G. C., Boone, R. B., Dublin, H. T., Dutton, C. L., Gichira, A., Guthmann, A., Herrik, A. L., Holekamp, K. E., Karimi, R. R., Kifugo, S. C., Leimgruber, P., Mogensen, N., Moiko, S. S., Mukeka, J. M., Nabaala, H., Ndambuki, S., Njino, L. M. ... Buitenwerf, R. (2025). Short-term study fails to capture negative impacts of livestock intensification on wildlife. Proceedings of the National Academy of Sciences of the United States of America, 122(23), Article e2502418122. https://doi.org/10.1073/pnas.2502418122

Konda, S. R., Barik, P., Singh, S., Mottamchetty, V., Srivasthava, A., Ganeev, R. A., Soma, V. R., Guo, C. & Li, W. (2025). Third-Order Nonlinear Optical Modulation in MoS₂ Nanosheets in the Presence of CdSe and CdSe/V₂O₅ Quantum Dots. Advanced Optical Materials, 13(18), Article 2402416. https://doi.org/10.1002/adom.202402416

Gravgaard, M. B. & Lee, Y. W. (2025). Decomposition of real numbers into sums of Lüroth sets. https://arxiv.org/abs/2506.12513

Rummel, P. S., Englert, P., Beule, L. & Pausch, J. (2025). N₂O flux dynamics and production pathways modulated by soil organic matter and litter turnover. Biology and Fertility of Soils, 61(7), 1235-1251. https://doi.org/10.1007/s00374-025-01925-1

Palmer, M. H., Hoffmann, S. V., Jones, N. C., Coreno, M., De Simone, M., Grazioli, C., Aitken, R. A. & Patterson, I. L. J. (2025). The singlet excited states of fulvene and of its 6,6-dimethyl derivative; a combined study of their energy levels by absorption spectroscopy, configuration interaction and density functional calculations. The Journal of Chemical Physics, 163(2), Article 024323. https://doi.org/10.1063/5.0278573

Borup, A. B., Phan, N. Q. T., Kløve, M., Bertelsen, A. D., Støckler, L. J. & Iversen, B. B. (2025). In situ X-ray diffraction guided synthesis of Ni₂P nanoparticles for the oxygen evolution reaction. Journal of Materials Chemistry A, 13(27), 21876-21887. https://doi.org/10.1039/d5ta02072g

Cheula, R. & Andersen, M. (2025). Transition States Energies from Machine Learning: An Application to Reverse Water-Gas Shift on Single-Atom Alloys. ACS Catalysis, 15(13), 11377-11388. https://doi.org/10.1021/acscatal.5c02818

Fierro-Minda, A., Tribble, C. M., Guerrero-Molina, T., Tobar, F. & Pérez, Á. J. (2025). A new species of Bomarea (Alstroemeriaceae) from an historically documented location in Ecuador. Phytotaxa, 705(2), 227-234. https://doi.org/10.11646/phytotaxa.705.2.10

Li, M. T., Shiao, J. C., Lin, C. H., Kao, L. L., Hsiao, H. C., Hsieh, C. Y., Wang, P. L., Grønkjær, P. & Chung, M. T. (2025). Age-based δ¹⁵N and δ¹³C values of otolith organic matter reveal trophic ecology in marine fishes. Limnology and Oceanography Letters, 10(5), 734-744. https://doi.org/10.1002/lol2.70041

Kobek-Kjeldager, C., Jensen, L. D., Foldager, L., Kaiser, M., Thodberg, K. & Herskin, M. S. (2025). Deck height did not affect behavioural measures of ‘natural movements’ and ‘adequate ventilation’ during 8 h and 23 h transport of weaner pigs. Applied Animal Behaviour Science, 290, Article 106714. https://doi.org/10.1016/j.applanim.2025.106714

Garland, W. & Jensen, T. H. (2025). Integrator: A guardian against RNA-induced chaos. Cell Chemical Biology, 32(6), 780-782. https://doi.org/10.1016/j.chembiol.2025.05.009

Stetkær, H. (2025). On a sine addition/subtraction law on semigroups. Aequationes Mathematicae, 99(6), 2699-2711. https://doi.org/10.1007/s00010-025-01179-0

Engsvang, M. & Elm, J. (2025). Iodine Clusters in the Atmosphere II: Cluster Formation Potential of Iodine Oxyacids and Iodine Oxides. ACS Omega, 10(23), 24887-24896. https://doi.org/10.1021/acsomega.5c02147

Kretsch, R. C., Albrecht, R., Andersen, E. S., Chen, H.-A., Chiu, W., Das, R., Gezelle, J. G., Hartmann, M. D., Höbartner, C., Hu, Y., Jadhav, S., Johnson, P. E., Jones, C. P., Koirala, D., Kristoffersen, E. L., Largy, E., Lewicka, A., Mackereth, C. D., Marcia, M. ... Kryshtafovych, A. (2026). Functional relevance of CASP16 nucleic acid predictions as evaluated by structure providers. Proteins: Structure, Function and Bioinformatics, 94(1), 51-78. https://doi.org/10.1002/prot.70043

Elworth, M. L. (2024). Multiple representations in mathematical practice: Cluster algebras as a case study. https://diagrams-2024.diagrams-conference.org/wp-content/uploads/sites/2/2024/09/D-24_paper_68.pdf