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Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Gronefeld, G. V., Tezkan, B., Auken, E. & Christiansen, A. V. (2005). First data of a new radiomagnetotelluric (RMT) device and a new inversion approach. Abstract from 11th meeting of environmental and engineering geophysics, EAGE, Near Surface division, Palermo, Italy.
Kristensen, M., Canning, J., Deyerl, H. J. & Sørensen, H. R. (2005). Annealing of UV-induced birefringence in hydrogen loaded germanosilicate fibres. Abstract from BGPP, Sydney, Australia.
Kristensen, M., Sørensen, H. R. & Canning, J. (2005). Hypersensitisation using 266nm laser light. Abstract from BGPP, Sydney, Australia.
Kristensen, M., Sørensen, H. R., Canning, J. & Gregersen, N. (2005). Study of Photosensitivity as a Function of Polarization for UV-Light in Optical Fibre using Blue Luminescence. Abstract from BGPP, Sydney, Australia.
Kristensen, M., Sørensen, H. R. & Canning, J. (2005). Thermal Hypersensitisation and Corresponding Grating Evolution in Ge-doped optical fibre. Poster session presented at BGPP, Sydney, Australia.
Kristensen, M., Poumellec, P., Liu, Q., Blum, R., Blaise, G., Braga, D. & Ren, Y. (2005). Display of the electronic insulating properties by Secondary Electron Emission. Poster session presented at BGPP, Sydney, Australia.
Kristensen, M., Fage-Pedersen, J. & Jakobsen, R. S. (2005). Glass Waveguides for Periodic Poling. Abstract from BGPP, Sydney, Australia.
Kristensen, M., Margulis, W., Myren, N., Fage-Pedersen, J., Pruneri, V., Belmonte, M., Kazansky, P., Corbari, C., Canagasabey, A., Deparis, O., Ferraris, M., Poumellec, B., Ortega, B., Martinelli, G., Kudlinski, A. & Quiquempois, Y. (2005). Achievements of the GLAMOROUS project on poling. Abstract from BGPP, Sydney, Australia.
Kristensen, M. (2005). Crystal waveguide components approaching maturity for applications. Abstract from Photonic Crystal Workshop, BGPP, Sydney, Australia.
Sørensen, K. I., Auken, E. & Christiansen, A. V. (2005). Large scale mapping of aquifer covering layers using geoelectrical methods. Abstract from Workshop. Hydrogeophysics - A tool for sustainable use of groundwater ressources, 11th meeting of environmental and engineering geophysics, EAGE, Near Surface division, Palermo, Italy.
Kristensen, M., Tetu, A., Frandsen, L. H., Harpøth, A., Borel, P. I., Jensen, J. S. & Sigmund, O. (2005). Low-Loss Photonic Crystal Y-Splitter for TM Polarization. Poster session presented at Photonic Crystal Workshop, BGPP, Sydney, Australia.
Kristensen, M. (2005). Bio-Applications of Nano-Photonics. Abstract from workshop on ‘Biophotonics: glasses, devices and applications, Turin, Italy.
Sørensen, K. I., Auken, E. & Halkjær, M. (2005). SkyTEM -High resolution airborne transient measurements. Abstract from KEGS Airborne Geophysics Symposium. PADC 2005 Conference, Toronto, Canada.
Jacobsen, A. R. & Currie, P. J. (2005). Significant bite traces found on dinosaur bones from Dinosaur Park Formation (Late Cretaceous), Alberta, Canada. Poster session presented at Dinosaur Park Symposium, Drumheller, Alberta, Canada.
Krüger, A., Bukowy, Z., Lutzelberger, M., Stevnsner, T., Kristensen, M., Kjems, J., Besenbacher, F. & Raarup, M. K. (2005). Single-molecule FRET microscopy on DNA telomeres. Poster session presented at Bio-image summer school at ENS, Paris, France.
Kristensen, M., Galili, M., Oxenløve, L. K., Zibar, D., Clausen, A. T., Deyerl, H. J., Plougmann, N. & Jeppesen, P. (2005). 160 Gb/s Notch-Filtered Raman-Assisted XPM Wavelength Converter. Abstract from ECOC.
Kristensen, M., Pruneri, V., Margulis, W., Myren, N., Li, J., Fage-Pedersen, J., Belmonte, M., Kazansky, P., Corbari, C., Canagasabey, A., Deparis, O., Ferraris, M., Poumellec, B., Blum, R., Liu, Q., Zhoa, S., Ortega, B., Pastor, D., Martinelli, G. ... Quiquempois, Y. (2005). Recent advances in poled optical fibres. Abstract from IEEE-LEOS WFOPC Conference.
Kristensen, M., Martelli, C., Canning, J. & Groothoff, N. (2006). Ice formation inside the holes of a photonic crystal fibre with a grating. Abstract from the 30th Annual Condensed Matter and Materials Meeting - Australian and New Zealand Institutes of Physics, Charles Sturt University, Wagga-wagga, Australia.
Kristensen, M., Volkov, V. S., Bozhevolnyi, S. I., Borel, P. I. & Frandsen, L. H. (2005). Near-Field Characterization of Photonic Crystal Y-Splitters. Abstract from OSI-VI special issue of Physica Status Solidi 2, (12), 4087-4092 (2005); Presented at the OSI-6 Conference on ‘Optics of Surfaces and Interfaces´, Aalborg, Denmark.
Kristensen, M. & Tetu, A. (2005). Broadband planar PBG components. Abstract from The annual meeting of the Danish Optical Society (DOPS), Risø, Denmark.
Kristensen, M., Volkov, V. S., Bozhevolnyi, S. I., Borel, P. I. & Frandsen, L. H. (2005). Near-field characterization of photonic crystal components. Abstract from The annual meeting of the Danish Optical Society (DOPS), Risø, Denmark.
Kristensen, M. (2005). Biological nano-chips using PBG effects for optical sensing. Abstract from BIOP meeting, Risø, Denmark.
Ringbom, Å., Bartholin, T., Klein, P., Lindroos, A., Sveinbjörnsdóttir, Á. E. & Heinemeier, J. (2005). Naturvetenskaplig datering. In Ålands Kyrkor vol. 3 Sund och Vårdö (Vol. 3, pp. 3: 100-110). Ringbom, Å. editor., Ålands Landskapsstyrelsens Museibyrå.
Westergaard, M. & Lassen, K. B. (2006). Building and Deploying Visualizations of Coloured Petri Net Models Using BRITNeY Animation and CPN Tools. In Proceedings of Sixth Workshop and Tutorial on Practical Use of Coloured Petri Nets and the CPN Tools, volume PB-576 of DAIMI (pp. 119-136)
Machado, R. J., Lassen, K. B., Oliveira, S., Couto, M. & Pinto, P. (2005). Execution of UML Models with CPN Tools for Workflow Requirements Validation. In Proceedings of Sixth Workshop and Tutorial on Practical Use of Coloured Petri Nets and the CPN Tools, volume PB-576 of DAIMI (pp. 231-250). DAIMI PB-576.
Brunak, S. & Andersen, E. S. (2006). Virtuelle immunsystemer. Aktuel Naturvidenskab, (1), 20-23.
Bruntt, H., Kjeldsen, H., Buzasi, D. L. & Bedding, T. R. (2005). Evidence for Granulation and Oscillations in Procyon from Photometry with the WIRE Satellite. Astrophysical Journal, 633, 440-446.
O'Toole, S. J., Heber, U., Jeffery, C. S., Dreizler, S., Schuh, S. L., Woolf, V. M., Falter, S., Green, E. M., For, B. Q., Hyde, E. A., Kjeldsen, H., Mauch, T. & White, B. A. (2005). The MultiSite Spectroscopic Telescope campaign: 2m spectroscopy of the V361 Hya variable PG 1605+072. Astronomy & Astrophysics (A&A), 440, 667-674.
Jónsdóttir, K. Ý. & Jensen, E. B. V. (2005). Gaussian radial growth. Image Anal. Stereol., 24, 117-126.
Dindler, C., Eriksson, E., Iversen, O. S., Ludvigsen, M. & Lykke-Olesen, A. (2005). Mission from Mars: a method for exploring user requirements for children in a narrative space. In Proceeding of the 2005 conference on Interaction design and children (pp. 40-47). Association for Computing Machinery.
Westergaard, J., Auken, E., Foged, N. & Sørensen, K. I. (2005). SkyTEM kortlægning Give - Datarapport . Geofysisk afdeling, Geologisk Institut, Aarhus Universitet.
Westergaard, J., Foged, N., Auken, E. & Sørensen, K. I. (2005). SkyTEM survey Bording - Data report. Geofysisk afdeling, Geologisk Institut, Aarhus Universitet.
Westergaard, J., Auken, E. & Sørensen, K. I. (2005). SkyTEM Survey Aabenraa-Rødekro - Data report. Geofysisk afdeling, Geologisk Institut, Aarhus Universitet.
Westergaard, J., Auken, E., Foged, N. & Sørensen, K. I. (2005). SkyTEM kortlægning Jydske Aas - Datarapport. Geofysisk afdeling, Geologisk Institut, Aarhus Universitet.
Westergaard, J., Auken, E., Foged, N. & Sørensen, K. I. (2005). SkyTEM kortlægning Stenløse - Datarapport. Geofysisk afdeling, Geologisk Institut, Aarhus Universitet.

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Litt, T., Anselmetti, F., Baumgarten, H., Beer, J., Cagatay, N., Cukur, D., Damci, E., Glombitza, C., Haug, G., Heumann, G., Kallmeyer, J., Kipfer, R., Krastel, S., Kwiecien, O., Meydan, F., Orcen, S., Pickarski, N., Randlett, M.-E., Schmincke, H.-U. ... the PALEOVAN Scientific Team (2012). 500.000 years of environmental history in Eastern Anatolia: The PALEOVAN drilling project. Scientific Drilling, 14, 18-29. https://doi.org/10.2204/iodp.sd.14.02.2012
Petersen, D. G., Blazewicz, S., Waldrop, M., Herman, D. & Firestone, M. (2012). Abundance of functional groups of microorganisms as predictors for potential biogeochemical process rates. Abstract from 14th International Symposium on Microbial Ecology, Copenhagen, Denmark.
Petersen, D. G., Blazewicz, S. J., Firestone, M., Herman, D. J., Turetsky, M. & Waldrop, M. (2012). Abundance of microbial genes associated with nitrogen cycling as indices of biogeochemical process rates across a vegetation gradient in Alaska. Environmental Microbiology, 14(4), 993-1008.
Røy, H., Kallmeyer, J., Adhikari, R. R., Pockalny, R., Jørgensen, B. B. & D'Hondt, S. (2012). Aerobic microbial respiration in 86-million-year-old deep-sea red clay. Science, 336(6083), 922-925. https://doi.org/10.1126/science.1219424
Tilleman, L., Germani, F., De Hau, S., Helbo, S., Desmet, F., Van Doorslaer, S., Schoofs, L., Braeckman, B. B., Fago, A., Moens, L. & Dewilde, S. (2012). A globin domain in a neuronal transmembrane receptor in Caenorhabditis elegans. Abstract from XVII International Conference on Oxygen Binding and Sensing Proteins, Parma, Italy.
Haug, C., Van Roy, P., Leipner, A., Funch, P., Rudkin, D. M., Schöllmann, L. & Haug, J. T. (2012). A holomorph approach to xiphosuran evolution : a case study on the ontogeny of Euproops. Development, Genes and Evolution, 222(5), 253-268. https://doi.org/10.1007/s00427-012-0407-7
Seltmann, K. C., Yoder, M. J., Mikó, I., Forshage, M., Bertone, M. A., Agosti, D., Austin, A. D., Balhoff, J. P., Borowiec, M. L., Brady, S. G., Broad, G. R., Brothers, D. J., Burks, R. A., Buffington, M. L., Campbell, H. M., Dew, K. J., Ernst, A. F., Fernández-Triana, J. L., Gates, M. W. ... Deans, A. R. (2012). A hymenopterist’s guide to the Hymenoptera Anatomy Ontology utility, clarification, and future directions. Journal of Hymenoptera Research, 27, 67-88.
Wang, T. & Malte, H. (2012). A JEB classic on fish exercise. Journal of Experimental Biology, 4052-4054.
Stephansen, D. A., Nielsen, A. H., Hvitved-Jacobsen, T., Arias, C. A., Brix, H. & Vollertsen, J. (2012). Allocation of metal concentrations in sediments and biota from stormwater ponds and rural, shallow lakes. Abstract from Proceedings from the 7th SWS 2012 European Chapter Meeting, Aarhus, Denmark.
Fago, A. & Helbo, S. (2012). Allosteric effects and enzymatic functions of fish myoglobins in the protection against hypoxia. Abstract from XVII International Conference on Oxygen Binding and Sensing Proteins, Parma, Italy.
Weber, R. E., Fago, A., Malte, H., Storz, J. & Gorr, T. A. (2012). Allosteric Modulation of Oxygen Affinity in Dwarf Caiman Hemoglobin that Lacks Conventional Proton and Anion Binding Sites. Abstract from XVII International Conference on Oxygen Binding and Sensing Proteins, Parma, Italy.
Damsgaard, C., Fago, A., Hagner-Holler, S., Malte, H., Burmester, T. & Weber, R. E. (2012). Allosteric regulation of O2 binding in hemocyanin of the millipede, Archispirostreptus gigas, and its molecular underpinnings. Abstract from XVII International Conference on Oxygen Binding and Sensing Proteins, Parma, Italy.
Montross, S. N., Skidmore, M., Tranter, M., Kivimaki, A.-L. & Parkes, R. (2012). A microbial driver of chemical weathering in glaciated systems. Geology, 41(2), 215-218. https://doi.org/10.1130/G33572.1
Biddle, J., Cardman, Z., Mendlovitz, H., Albert, D., Lloyd, K., Boetius, A. & Teske, A. (2012). Anaerobic oxidation of methane at different temperature regimes in Guaymas Basin hydrothermal sediments. I S M E Journal, 6, 1018-1031.
Blazewicz, S., Petersen, D. G., Waldrop, M. & Firestone, M. (2012). Anaerobic oxidation of methane in tropical and boreal soils: ecological significance in terrestrial methane cycling. Journal of Geophysical Research: Biogeosciences, 117(G2).
Groenen, M. A. M., Archibald, A. L., Uenishi, H., Tuggle, C. K., Takeuchi, Y., Rothschild, M. F., Rogel-Gaillard, C., Park, C., Milan, D., Megens, H.-J., Li, S., Larkin, D. M., Kim, H., Frantz, L. A. F., Caccamo, M., Ahn, H., Aken, B. L., Anselmo, A., Anthon, C. ... Schook, L. B. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491(7424), 393-398. https://doi.org/10.1038/nature11622
Jin, X., He, M., Ferguson, B., Meng, Y., Ouyang, L., Ren, J., Mailund, T., Sun, F., Sun, L., Shen, J., Zhuo, M., Song, L., Wang, J., Ling, F., Zhu, Y., Hvilsom, C., Siegismund, H., Liu, X., Gong, Z. ... Wang, X. (2012). An effort to use human-based exome capture methods to analyze chimpanzee and macaque exomes. PLoS One, 7(7), e40637. https://doi.org/10.1371/journal.pone.0040637
Arias, C. A., Istenic, D., Nielsen, A. H., Wium-Andersen, T. & Vollertsen, J. (2012). A new Approach to Run Off pollution treatment: Planted wetponds. Abstract from Proceedings from the 7th SWS 2012 European Chapter Meeting, Aarhus, Denmark.
Guareschi, S., Gutiérrez-Cánovas, C., Picazo, F., Sánchez-Fernández, D., Rodenas, P. A., Velasco, J. & Millán, A. (2012). Aquatic macroinvertebrate biodiversity: patterns and surrogates in mountainous Spanish national parks. Aquatic Conservation, 22(5), 598-615. https://doi.org/10.1002/aqc.2256
Kubo, K., Lloyd, K., Biddle, J., Amann, R., Teske, A. & Knittel, K. (2012). Archaea of the Miscellaneous Crenarchaeotal Group are abundant, diverse and widespread in marine sediments. I S M E Journal, 6(10), 1949-1965.
Cámara-Leret, R., Paniagua-Zambrana, N. & Macia, M. J. (2012). A standard protocol for gathering palm ethnobotanical data and socioeconomic variables across the tropics. In B. Ponman & R. Busmann (Eds.), Medicinal Plants and the Legacy of R.E. Schultes (pp. 41-71). Missouri Botanical Garden Press.
C. Koblitz, J., Wahlberg, M., Stilz, P., Madsen, P. P. T., Beedholm, K. & Schnitzler, H.-U. (2012). Asymmetry and dynamics of a narrow sonar beam in an echolocating harbor porpoise. Acoustical Society of America. Journal, 131(3), 2315-2324. https://doi.org/10.1121/1.3683254
Temkiv, T. S., Finster, K., Hansen, B. M., Pasic, L. & Karlson, U. G. (2012). Atmospheric methane oxidation by airborne methanotrophic bacteria at cloudlike conditions. Abstract from ISME Conference 2012, København, Denmark.
Waldrop, M. P., Harden, J. W., Turetsky, M. R., Petersen, D. G., McGuire, A. D., Briones, M. J. I., Churchill, A. D., Doctor, D. H. & Pruett, L. E. (2012). Bacterial and enchytraeid abundance accelerate soil carbon turnover along a lowland vegetation gradient in interior Alaska. Soil Biology & Biochemistry.
Mitsunobu, S., Shiraishi, F., Makita, H., Orcutt, B., Kikuchi, S., Jørgensen, B. B. & Takahashi, Y. (2012). Bacteriogenic Fe(III) (Oxyhydr)oxides Characterized by Synchrotron Microprobe Coupled with Spatially Resolved Phylogenetic Analysis. Environmental Science & Technology, 46(6), 3304-3311.
Winther, G., Wang, T., Lund, S. & Wegener, G. (2012). Betydning af magnesium i psykisk sygdom. Poster session presented at Psykiatriens 7. Forskningsdag, Risskov, Denmark.
Hagen, M., Kissling, W. D., Rasmussen, C., De Aguiar, M. A. M., Brown, L. E., Carstensen, D. W., Alves-Dos-Santos, I., Dupont, Y., Edwards, F. K., Genini, J., Guimarães Jr., P. R., Jenkins, G. B., Jordano, P., Kaiser-Bunbury, C., Ledger, M. E., Maia, K. P., Marquitti, F. M. D., Mclaughlin, Ó., Morellato, L. P. ... Olesen, J. M. (2012). Biodiversity, Species Interactions and Ecological Networks in a Fragmented World. Advances in Ecological Research, 46(2012), 89-120. https://doi.org/10.1016/B978-0-12-396992-7.00002-2
Markfoged, R., Nielsen, L. P. & Revsbech, N. P. (2012). Biofilm formation at the oxic-anoxic interface of liquid manure. Abstract from ISME 14 - The power of the small , Copenhagen, Denmark.
Markfoged, R., Nielsen, L. P. & Revsbech, N. P. (2012). Biofilm formation at the oxic‐anoxic interface of liquid manure. Poster session presented at ISME 14 - The power of the small , Copenhagen, Denmark.