Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Cadiz Escobar, M. I., Tengstedt, A. N. B., Sørensen, I. H., Pedersen, E. S., Fox, A. D. & Hansen, M. M. (2024). Demographic history and inbreeding in two declining sea duck species inferred from whole genome sequence data. Evolutionary Applications, 17(9), Article e70008. https://doi.org/10.1111/eva.70008

Tengstedt, A. N. B. & Hansen, M. M. (2024). Snæblen lever kun i Danmark. Nu har forskerne opdaget afgørende nyt om den truede fisk. Videnskab.dk. https://videnskab.dk/naturvidenskab/snaeblen-lever-kun-i-danmark-nu-har-forskerne-opdaget-afgoerende-nyt-om-den-truede-fisk/

Vera-Puerto, I., Valdés, H., Laurens-Arredondo, L., López-Cortés, X., Quiroz, M., Hernández-Crespo, C., Belmonte, M., Campos, J. L., Martín-Monerris, M., Miglio, R., Molle, P. & Arias, C. A. (2024). Educating Professionals to Develop Nature-Based Solutions (NBS) as Infrastructure for Water Pollution Control: A Course Proposal. Sustainability, 16(16), Article 7199. https://doi.org/10.3390/su16167199

Wu, W., Guo, F., Elze, S., Knopp, J. & Banzhaf, E. (2024). Deciphering the effects of 2D/3D urban morphology on diurnal cooling efficiency of urban green space. Building and Environment, 266, Article 112047. https://doi.org/10.1016/j.buildenv.2024.112047

Boegholm, N., Petriman, N. A., Tanvir, N. M. & Lorentzen, E. (2024). Architecture of RabL2-associated complexes at the ciliary base: A structural modeling perspective: Deciphering the structural organization of ciliary RabL2 complexes. BioEssays, 46(9), Article 2300222. https://doi.org/10.1002/bies.202300222

Dahl, L., Jensen, T. H., Gottschalck, E., Karlskov-Mortensen, P., Jensen, T. D., Nielsen, L., Andersen, M. K., Buckland, R., Wild, T. F. & Blixenkrone-Møller, M. (2004). Immunization with plasmid DNA encoding the hemagglutinin and the nucleoprotein confers robust protection against a lethal canine distemper virus challenge. Vaccine, 22(27-28), 3642-3648. https://doi.org/10.1016/j.vaccine.2004.03.016

Andersen, L. H., Pertoldi, C., Loeschcke, V., Laursen, J. T., Jensen, T. H. & Kristensen, T. N. (2013). Kan Kirkeuglen (ATHENE NOCTUA) reddes i Danmark? Flora og Fauna, 119(1+2), 1-9.

Hasselholt, S., Stephensen, H. J. T., Janssen, D., Molnar, K., Andersen, A. H., Dubois, A., Hahn, U., Wang, Y., Sporring, J., Xu, Z. & Nyengaard, J. R. (2024). Investigating the Role of ADGRV1 in ALS Using a Novel Mouse Model. Abstract from The 7th Danish Bioimaging Scientific Symposium, Copenhagen, Denmark.

Barnes, C. J., Bünner, M. S., Ramírez-Flores, M. R., Nielsen, I. B., Ramos-Madrigal, J., Zharikova, D., McLaughlin, C. M., Gilbert, M. T. & Sawers, R. J. H. (2024). The ancestral environment of teosinte populations shapes their root microbiome. Environmental Microbiome, 19(1), Article 64. https://doi.org/10.1186/s40793-024-00606-0

Pedersen, K. B., Borges-Araújo, L., Stange, A. D., Souza, P. C. T., Marrink, S. J. & Schiøtt, B. (2024). Olives: A Go̅-like Model for Stabilizing Protein Structure via Hydrogen Bonding Native Contacts in the Martini 3 Coarse-Grained Force Field. Journal of Chemical Theory and Computation, 20(18), 8049–8070. https://doi.org/10.1021/acs.jctc.4c00553

Suteau, V., Zuzic, L., Hansen, D. H., Kjølbye, L. R., Sibilia, P., Gourdin, L., Briet, C., Thomas, M., Bourdeaud, E., Tricoire-Leignel, H., Schiøtt, B., Carato, P., Rodien, P. & Munier, M. (2024). Effects and risk assessment of halogenated bisphenol A derivatives on human follicle stimulating hormone receptor: An interdisciplinary study. Journal of Hazardous Materials, 479, Article 135619. https://doi.org/10.1016/j.jhazmat.2024.135619

Crossley, D. A., Crossley, J. L., Conner, J. L., Smith, B., Elsey, R., Nelson, D. & Wang, T. (2024). Temperature effects on blood gases in embryonic American alligators (Alligator mississippiensis). Comparative Biochemistry and Physiology -Part A : Molecular and Integrative Physiology, 297, Article 111733. https://doi.org/10.1016/j.cbpa.2024.111733

Ruiz, P. A., Baudoin, F., Chen, L., Rogers, L., Shanmugalingam, N. & Teplyaev, A. (2023). BV functions and fractional Laplacians on Dirichlet spaces. Asian Journal of Mathematics, 27(4), 441-466. Article 001. https://doi.org/10.4310/ajm.2023.v27.n4.a1

Pagh, S., Pertoldi, C., Petersen, H. H., Jensen, T. H., Hansen, M. S. & Chriél, M. (2019). Mink in Danish nature. (1 ed.)

Wang, X., Hao, D. & Kadarmideen, H. N. (2021). GeneDMRs: An R Package for Gene-Based Differentially Methylated Regions Analysis. Journal of Computational Biology, 28(3), 304-316. https://doi.org/10.1089/cmb.2020.0081

Helou, B., Ritchie, M. W., MacMillan, H. A. & Andersen, M. K. (2024). Dietary potassium and cold acclimation additively increase cold tolerance in Drosophila melanogaster. Journal of Insect Physiology, 159, Article 104701. https://doi.org/10.1016/j.jinsphys.2024.104701

Bregnhøj, M., Thorning, F. & Ogilby, P. R. (2024). Singlet Oxygen Photophysics: From Liquid Solvents to Mammalian Cells. Chemical Reviews, 124(17), 9949-10051. https://doi.org/10.1021/acs.chemrev.4c00105

Truelsen, C. G., Rønde, H. S., Kallehauge, J. F., Poulsen, L., Havelund, B. M., Pedersen, B. G., Iversen, L. H., Spindler, K. G. & Kronborg, C. S. (2024). Inter-fraction motion robustness in a prospective phase II trial on dose-escalated proton reirradiation for locally recurrent rectal cancer. Physics and Imaging in Radiation Oncology, 31, Article 100634. https://doi.org/10.1016/j.phro.2024.100634

Jensen, K., Thormose, S. F., Noer, N. K., Schou, T. M., Kargo, M., Gligorescu, A., Nørgaard, J. V., Hansen, L. S., Zaalberg, R. M., Nielsen, H. M. & Kristensen, T. N. (2024). Controlled and polygynous mating in the black soldier fly: advancing breeding programs through quantitative genetic designs. https://doi.org/10.1101/2024.09.09.611978

Georgalas, M. D., Hansen, L. S., Laursen, S. F., Bahrndorff, S., Sørensen, J. G., Kargo, M., Kristensen, T. N., Guldbrandtsen, B. & Nielsen, H. M. (2024). Genetic parameters for house fly larval performance in two dietary environments. In Book of Abstracts of the 75th Annual Meeting of the European Federation of Animal Science (pp. 634-634). EAAP. https://docs.eaap.org/boa/2024_Florence_EAAP_Book_Abstracts.pdf

Thomsen, D., Iversen, E. M., Skønager, J. T., Luo, Y., Li, L., Roldin, P., Priestley, M., Pedersen, H. B., Hallquist, M., Ehn, M., Bilde, M. & Glasius, M. (2024). The effect of temperature and relative humidity on secondary organic aerosol formation from ozonolysis of Δ³-carene. Environmental Science: Atmospheres, 4(1), 88-103. https://doi.org/10.1039/D3EA00128H

Pedersen, A. N., Knattrup, Y. & Elm, J. (2024). A cluster-of-functional-groups approach for studying organic enhanced atmospheric cluster formation. Aerosol Research, 2(1), 123-134. https://doi.org/10.5194/ar-2-123-2024

Baaner, L. & Pedersen, P. B. M. (2020). Beskyttelsen af urørt skov i Danmark. Tidskrift for Miljø , Oktober(2020), 385-396. https://www.jurabibliotek.dk/view/journals/tfm/2020/10/article-p385.xml

Wang, L., Pedersen, P. B. M. & Svenning, J.-C. (2023). Rewilding abandoned farmland has greater sustainability benefits than afforestation. npj biodiversity, 2, Article 5. https://doi.org/10.1038/s44185-022-00009-9

Normand, S., Assmann, J. J., Pedersen, P. B. M. & Treier, U. (2020). Pilotprojekt: LiDAR og satellit-baseret kortlægning af naturmæssigt særligt værdifulde skove og deres forstyrrelseshistorik.

Ejrnæs, R. & Pedersen, P. B. M. (2021). Vurdering af arealet med vild natur i Danmark. http://dce2.au.dk/pub/komm/N2021_32_komm.pdf

Pedersen, P. B. M. & Kristensen, J. A. (2023). Sammenspil mellem naturgenopretning og klimaafbødning og –tilpasning. https://bio.au.dk/fileadmin/aar.au.dk/Billeder/Forskning/Forskningscentre/SustainScapes/Sammenspil_mellem_naturgenopretning_og_klimaafboedning_og_-_tilpasning.pdf

Larsen, S. T., Dannersø, J. K., Nielsen, C. J. F., Poulsen, L. R., Palmgren, M. & Nissen, P. (2024). Conserved N-terminal Regulation of the ACA8 Calcium Pump with Two Calmodulin Binding Sites. Journal of Molecular Biology, 436(20), Article 168747. https://doi.org/10.1016/j.jmb.2024.168747

Knudsen, L. J., Rauh, V., Pedersen, J. N., Dekker, P., Otzen, D. E., Larsen, L. B. & Nielsen, S. D. H. (2024). Insight into protein crosslinking and casein polymerization in pre- and posthydrolyzed lactose-free ultra-high-temperature milk during long-term storage. Journal of Dairy Science, 107(12), 10497-10511. https://doi.org/10.3168/jds.2024-25103

Stamness, A., Cuenca-García, C., Gustavson, L., Horsley, T., Jónasson, Ó. V., Koivisto, S., Kristiansen, S. M., Perttola, W., Schneidhofer, P., Stott, D., Tonning, C., Traustadóttir, R., Trinks, I., Viberg, A. & Westergaard, B. (2024). A Review on the Development and Current Role of Ground-Based Geophysical Methods for Archaeological Prospection in Scandinavia: A Review on the Development and Current Role of Ground-Based Geophysical Methods for Archaeological Prospection in Scandinavia. In C. Cuenca-Garcia, A. Asăndulesei & K. M. Lowe (Eds.), World Archaeo-Geophysics: Integrated minimally invasive approaches using country-based examples (pp. 141-184). Springer. https://doi.org/10.1007/978-3-031-57900-4_6

Kristiansen, S. M. (2024). Manden der kender de hvide pletter på kortet. In J. Berthold (Ed.), 70 år med arkæologi på Bornholm. Festskrift tilegnet Finn Ole Nielsen, Bornholms Museums mangeårige chefarkæolog i anledning af hans 70-års fødselsdag (pp. 83-84).

Kaur, G. & Rattan, S. (Eds.) (2024). Brain and Mental Health in Ageing. Springer, Cham. Healthy Ageing and Longevity Vol. 21 https://doi.org/10.1007/978-3-031-68513-2

Kaur, G. & Rattan, S. (2024). Defining, Re-defining, and Understanding the Brain and Mental Health During Ageing. In G. Kaur & S. I. S. Rattan (Eds.), Brain and Mental Health in Ageing (pp. 3-16). Springer, Cham. https://doi.org/10.1007/978-3-031-68513-2_1

Thorsøe, R., Locher, P., Rathish, H. & Schulz, H.-J. (2024). A Framework for Axis Breaks in Charts. In Proceedings of the International Symposium on Vision, Modeling, and Visualization (VMV'24) (pp. 1-8). The Eurographics Association. https://doi.org/10.2312/vmv.20241198

Digel, L., Bonné, R. & Aiyer, K. (2024). Are all microbes electroactive? Cell Reports Physical Science, 5(9), Article 102200. https://doi.org/10.1016/j.xcrp.2024.102200

Svennevig, K., Hicks, S. P., Forbriger, T., Lecocq, T., Widmer-Schnidrig, R., Mangeney, A., Hibert, C., Korsgaard, N. J., Lucas, A., Satriano, C., Anthony, R. E., Mordret, A., Schippkus, S., Rysgaard, S., Boone, W., Gibbons, S. J., Cook, K. L., Glimsdal, S., Løvholt, F. ... Wirtz, B. (2024). A rockslide-generated tsunami in a Greenland fjord rang Earth for 9 days. Science, 385(6714), 1196-1205. https://doi.org/10.1126/science.adm9247

Harboe, M., Kjaer-Sorensen, K., Füchtbauer, E. M., Fenton, R. A., Thomsen, J. S., Brüel, A. & Oxvig, C. (2024). The metalloproteinase PAPP-A is required for IGF-dependent chondrocyte differentiation and organization. Scientific Reports, 14, Article 20161. https://doi.org/10.1038/s41598-024-71062-6

Sanchez-Roman, I., Ferrando, B., Myrup Holst, C., Mengel-From, J., Hoei Rasmussen, S., Thinggaard, M., Bohr, V. A., Christensen, K. & Stevnsner, T. (2024). Markers of Mitochondrial Function and DNA Repair Associated with Physical Function in Centenarians. Biomolecules, 14(8), Article 909. https://doi.org/10.3390/biom14080909

Luo, Y., Thomsen, D., Iversen, E. M., Roldin, P., Skønager, J. T., Li, L., Priestley, M., Pedersen, H. B., Hallquist, M., Bilde, M., Glasius, M. & Ehn, M. (2024). Formation and temperature dependence of highly oxygenated organic molecules (HOMs) from δ3-carene ozonolysis. Atmospheric Chemistry and Physics, 24(16), 9459-9473. https://doi.org/10.5194/acp-24-9459-2024

Tataka, R., Sharma, A., Shinozaki, M., Johmen, T., Kumasaka, T., Chen, Y. P. & Otsuka, T. (2024). Surface Gate-Defined Quantum Dots in MoS₂ with Bi Contacts. Journal of the Physical Society of Japan, 93(9), Article 094601. https://doi.org/10.7566/JPSJ.93.094601

Stetkær, H. (2024). The equation f(xy)=f(x)h(y)+g(x)f(y) and representations on C². Aequationes Mathematicae, 98(5), 1419-1438. https://doi.org/10.1007/s00010-023-01014-4

Korstgård, J. A., Mengel, F. C., Glassley, W. E. & Sørensen, K. (2024). The Kangâmiut dykes in West Greenland: markers of the tectono-metamorphic evolution of the southern Nagssugtoqidian orogen and its foreland. GEUS Bulletin, 58, Article 8312. https://doi.org/10.34194/geusb.v58.8312

Li, Y., Svenning, J. C., Zhou, W., Zhu, K., Abrams, J. F., Lenton, T. M., Ripple, W. J., Yu, Z., Teng, S. N., Dunn, R. R. & Xu, C. (2024). Green spaces provide substantial but unequal urban cooling globally. Nature Communications, 15, Article 7108. https://doi.org/10.1038/s41467-024-51355-0

Khorsand, R. S., Sancier-Barbosa, F., May, J. L., Høye, T. T. & Oberbauer, S. F. (2024). Effects of short-and long-term experimental warming on plant–pollinator interactions and floral rewards in the Low Arctic. Arctic Science, 10(3), 424-442. https://doi.org/10.1139/as-2022-0034

E, S., Login, F. H., Riishede, A., Dam, V. S., Jensen, T. K. & Nejsum, L. N. (2024). The water channels Aquaporin-1 and Aquaporin-3 interact with and affect the cell polarity protein Scribble in 3D in vitro models of breast cancer. American Journal of Physiology: Cell Physiology, 327(5), C1323-C1334. https://doi.org/10.1152/ajpcell.00094.2024

Spence, M. A., Martindale, J. A., Alliji, K., Bannister, H. J., Thorpe, R. B., Walker, N. D., Mitchell, P. J., Kerr, M. R. & Dolder, P. J. (2024). Assessing the effect of multispecies interactions on precautionary reference points using an ensemble modelling approach: A North Sea case study. Fisheries Research, 280, Article 107160. https://doi.org/10.1016/j.fishres.2024.107160

Mckenzie, M., Monty, S., Yong, D., Kobayashi, C., Karakas, A. I., Nissen, P. E., Norris, J. E., Rains, A., Mura-Guzmán, A., Wang, E. X. & Martell, S. (2024). Magnesium isotope ratios in Milky Way and dwarf galaxy stars. Monthly Notices of the Royal Astronomical Society: Letters, 534(1), L35-L41. https://doi.org/10.1093/mnrasl/slae077

Zonno, M., Michiardi, M., Boschini, F., Levy, G., Volckaert, K., Curcio, D., Bianchi, M., Rosa, P. F. S., Fisk, Z., Hofmann, P., Elfimov, I. S., Green, R. J., Sawatzky, G. A. & Damascelli, A. (2024). Mixed-valence state in the dilute-impurity regime of La-substituted SmB₆. Nature Communications, 15, Article 7621. https://doi.org/10.1038/s41467-024-51569-2

Shaik, I. & Van de Pol, J. (2024). Optimal Layout Synthesis for Deep Quantum Circuits on NISQ Processors with 100+ Qubits. In S. Chakraborty & J.-H. R. Jiang (Eds.), 27th International Conference on Theory and Applications of Satisfiability Testing, SAT 2024 Article 26 Dagstuhl Publishing. https://doi.org/10.4230/LIPIcs.SAT.2024.26

Rasulov, U., Wang, H. K., Viennet, T., Droemer, M. A., Matosin, S., Schindler, S., Sun, Z. Y. J., Mureddu, L., Vuister, G. W., Robson, S. A., Arthanari, H. & Kuprov, I. (2024). Protein NMR assignment by isotope pattern recognition. Science Advances, 10(36), Article eado0403. https://doi.org/10.1126/sciadv.ado0403

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