Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Ma, Y., Yu, Z. & Valero, J. (2024). Recent Advances on Catenanes and Rotaxanes Made of DNA. In E. M. Pérez (Ed.), Mechanically Interlocked Materials: Polymers, Nanomaterials, MOFs, and more (pp. 195-216). Wiley.

de Jonge, R. W., Xavier, C., Olenius, T., Elm, J., Svenhag, C., Hyttinen, N., Nieradzik, L., Sarnela, N., Kristensson, A., Petäjä, T., Ehn, M. & Roldin, P. (2024). Natural Marine Precursors Boost Continental New Particle Formation and Production of Cloud Condensation Nuclei. Environmental Science & Technology, 58(25), 10956-10968. https://doi.org/10.1021/acs.est.4c01891

Korsgaard, U., García-Rodríguez, J. L., Jakobsen, T., Ahmadov, U., Dietrich, K. G., Vissing, S. M., Paasch, T. P., Lindebjerg, J., Kjems, J., Hager, H. & Kristensen, L. S. (2024). The Transcriptional Landscape of Coding and Noncoding RNAs in Recurrent and Nonrecurrent Colon Cancer. American Journal of Pathology, 194(8), 1424-1442. https://doi.org/10.1016/j.ajpath.2024.04.003

Thomassen, E. E., Sigsgaard, E. E., Jensen, M. R., Olsen, K., Hansen, M. D. D. & Thomsen, P. F. (2024). Environmental DNA metabarcoding reveals temporal dynamics but functional stability of arthropod communities in cattle dung. Journal of Animal Ecology, 93(8), 1003-1021. https://doi.org/10.1111/1365-2656.14119

Barrett, M., Müller-Eberstein, M., Bassignana, E., Pauli, A. B., Zhang, M. & van der Goot, R. (2024). Can Humans Identify Domains? In N. Calzolari, M.-Y. Kan, V. Hoste, A. Lenci, S. Sakti & N. Xue (Eds.), 2024 Joint International Conference on Computational Linguistics, Language Resources and Evaluation, LREC-COLING 2024 - Main Conference Proceedings (pp. 2745-2765). European Language Resources Association (ELRA).

Meierhofer, M. B., Tena, E., Lilley, T. M., Dechmann, D. K. N., Voigt, C. C., Troitsky, T. S., de Bruyn, L., Braun de Torrez, E., Eldegard, K., Elmeros, M., Gyselings, R., Hoyt, D., Janssen, R., Jonasson, K. A., López-Baucells, A., Matlova, M., Melber, M., Perea, S., Stidsholt, L. ... Weller, T. J. (2025). Re-weighing the 5% tagging recommendation: assessing the potential impacts of tags on the behaviour and body condition of bats. Mammal Review, 55(2), Article e12369. https://doi.org/10.1111/mam.12369

Luize, B. G., Bauman, D., ter Steege, H., Palma-Silva, C., do Amaral, I. L., de Souza Coelho, L., de Almeida Matos, F. D., de Andrade Lima Filho, D., Salomão, R. P., Wittmann, F., Castilho, C. V., de Jesus Veiga Carim, M., Guevara, J. E., Phillips, O. L., Magnusson, W. E., Sabatier, D., Revilla, J. D. C., Molino, J. F., Irume, M. V. ... Dexter, K. G. (2024). Geography and ecology shape the phylogenetic composition of Amazonian tree communities. Journal of Biogeography, 51(7), 1163-1184. https://doi.org/10.1111/jbi.14816

Wang, Y., Gélinas, Y., de Vernal, A., Mucci, A. O., Allan, E., Seidenkrantz, M. S. & Douglas, P. M. J. (2024). High rates of marine organic carbon burial on the southwest Greenland margin induced by Neoglacial advances. Communications Earth and Environment, 5(1), Article 335. https://doi.org/10.1038/s43247-024-01508-2

Hansen, L. S., Laursen, S. F., Bahrndorff, S., Sørensen, J. G., Sahana, G., Kristensen, T. N. & Nielsen, H. M. (2024). The unpaved road towards efficient selective breeding in insects for food and feed. https://arxiv.org/abs/2406.16364

Pedersen, J., Labouriau, R. & Feilberg, A. (2024). Effect of separation and air-plasma technology on NH3 emissions from field applied biogas digestate and pig slurry to grassland. 53. Abstract from N Workshop, Aarhus, Denmark. https://conferences.au.dk/fileadmin/conferences/2024/nworkshop/Book_of_abstracts_NW2024.pdf

Cai, Z., Hansen, L. S., Laursen, S. F., Nielsen, H. M., Bahrndorff, S., Tomberlin, J. K., Kristensen, T. N., Sørensen, J. G. & Sahana, G. (2024). Whole-genome sequencing of two captive black soldier fly populations: Implications for commercial production. Genomics, 116(5), Article 110891. https://doi.org/10.1016/j.ygeno.2024.110891

Slik, F., Pinho, B. X., Griffith, D. M., Webb, E., Raghubanshi, A. S., Quaresma, A. C., Cuni Sanchez, A., Sultana, A., Souza, A. F., Ensslin, A., Hemp, A., Lowe, A., Marshall, A. R., Anitha, K., Lykke, A. M., Armadyanto, Mansor, A., Honam, A. K., Poulsen, A. D. ... Hemati, Z. (2024). Wind dispersed tree species have greater maximum height. Global Ecology and Biogeography, 33(9), Article e13878. https://doi.org/10.1111/geb.13878

Jia, Q. P., Li, Q., Boucetta, H., Xu, Z. P. & Zhang, L. X. (2024). Biomimetic-smart materials for osteochondral regeneration and repair. Microstructures, 4(3), Article 2024026. https://doi.org/10.20517/microstructures.2023.84

Knattrup, Y., Kubečka, J., Wu, H., Jensen, F. & Elm, J. (2024). Reparameterization of GFN1-xTB for atmospheric molecular clusters: applications to multi-acid-multi-base systems. RSC Advances, 14(28), 20048-20055. https://doi.org/10.1039/d4ra03021d

Kjærgaard, E. R., Hasager, F., Petters, S. S., Glasius, M. & Bilde, M. (2024). Bubble-mediated generation of airborne nanoplastic particles. Environmental Science: Processes & Impacts, 26(7), 1216-1226. https://doi.org/10.1039/d4em00124a

Bjerg, C. S. B., Poehlein, A., Bömeke, M., Himmelbach, A., Schramm, A. & Brüggemann, H. (2024). Increased biofilm formation in dual-strain compared to single-strain communities of Cutibacterium acnes. Scientific Reports, 14(1), Article 14547. https://doi.org/10.1038/s41598-024-65348-y

Belachew, K. Y., Skovbjerg, C. K., Andersen, S. U. & Stoddard, F. L. (2024). Phenotyping revealed tolerance traits and genotypes for acidity and aluminum toxicity in European Vicia faba L. Physiologia Plantarum, 176(3), Article e14404. https://doi.org/10.1111/ppl.14404

Lin, J., Bjørk, P. K., Kolte, M. V., Poulsen, E., Dedic, E., Drace, T., Andersen, S. U., Nadzieja, M., Liu, H., Castillo-Michel, H., Escudero, V., González-Guerrero, M., Boesen, T., Pedersen, J. S., Stougaard, J., Andersen, K. R. & Reid, D. (2024). Zinc mediates control of nitrogen fixation via transcription factor filamentation. Nature, 631(8019), 164-169. https://doi.org/10.1038/s41586-024-07607-6

Hejlesen, R., Scheffler, F. B., Byrge, C. G., Kjær-Sørensen, K., Oxvig, C., Fago, A. & Malte, H. (2024). Assessing metabolic rates in zebrafish using a 3D-printed intermittent-flow respirometer and swim tunnel system. Biology Open, 13(6), Article bio060375. https://doi.org/10.1242/bio.060375

Malte, H. & Wang, T. (2024). Climate change: The rise in atmospheric CO2 poses no risk for acid–base balance in humans. Acta Physiologica, 240(1), Article e14066. https://doi.org/10.1111/apha.14066

Schlegel, R. W., Singh, R. K., Gentili, B., Bélanger, S., Castro De La Guardia, L., Krause-Jensen, D., Miller, C. A., Sejr, M. & Gattuso, J. P. (2024). Underwater light environment in Arctic fjords. Earth System Science Data, 16(6), 2773-2788. https://doi.org/10.5194/essd-16-2773-2024

Sørensen, A. L. & Dahl, T. W. (2024). Cascading oxygen loss shoreward in the oceans: Insights from the Cambrian SPICE event. One Earth, 7(6), 1108-1120. https://doi.org/10.1016/j.oneear.2024.05.011

Thomassen, A. B., Jansen, T. L. C. & Weidner, T. (2024). The secondary structure of diatom silaffin peptide R5 determined by two-dimensional infrared spectroscopy. Physical Chemistry Chemical Physics, 26(27), 18538-18546. https://doi.org/10.1039/d4cp00970c

Caragiannis, I., Hansen, K. A. & Rathi, N. (2024). On the Complexity of Pareto-Optimal and Envy-Free Lotteries. In AAMAS '24: Proceedings of the 23rd International Conference on Autonomous Agents and Multiagent Systems (pp. 244-252). Association for Computing Machinery. https://dl.acm.org/doi/10.5555/3

Teodori, L., Omer, M. & Kjems, J. (2024). RNA nanostructures for targeted drug delivery and imaging. RNA Biology, 21(1), 1-19. https://doi.org/10.1080/15476286.2024.2328440

Guimaraes, A., Borin, E. & Aranha, D. F. (2024). MOSFHET: Optimized Software for FHE over the Torus. Journal of Cryptographic Engineering, 14(3), 577-593. https://doi.org/10.1007/s13389-024-00359-z

Fleming, S. A., Reyes, S. M., Donovan, S. M., Hernell, O., Jiang, R., Lönnerdal, B., Neu, J., Steinman, L., Sørensen, E. S., West, C. E., Kleinman, R. & Wallingford, J. C. (2024). An expert panel on the adequacy of safety data and physiological roles of dietary bovine osteopontin in infancy. Frontiers in nutrition, 11, Article 1404303. https://doi.org/10.3389/fnut.2024.1404303

Senty, P., Guzinski, R., Grogan, K., Buitenwerf, R., Ardö, J., Eklundh, L., Koukos, A., Tagesson, T. & Munk, M. (2024). Fast Fusion of Sentinel-2 and Sentinel-3 Time Series over Rangelands. Remote Sensing, 16(11), Article 1833. https://doi.org/10.3390/rs16111833

Davis, M. C., André, A. A. M. & Kjaergaard, M. (2024). Entering the Next Phase: Predicting Biological Effects of Biomolecular Condensates. Journal of Molecular Biology, 436(21), Article 168645. https://doi.org/10.1016/j.jmb.2024.168645

Kristensen, L. G., Grinderslev, J. B., Amdisen, M. B. & Jensen, T. R. (2024). Ligand substitution as a strategy to tailor cationic conductivity in all-solid-state batteries. Communications Materials, 5, Article 107. https://doi.org/10.1038/s43246-024-00527-y

Daussin, A., Vannier, P., Daboussy, L., Šantl-Temkiv, T., Cockell, C. & Marteinsson, V. Þ. (2024). Atmospheric dispersal shapes rapid bacterial colonization of Icelandic Lava Rocks. FEMS Microbes, 5, Article xtae016. https://doi.org/10.1093/femsmc/xtae016

Wang, Y., Chen, C., Xiong, X., Skaanvik, S. A., Zhang, Y., Bøjesen, E. D., Wang, Z., Liu, W. & Dong, M. (2024). In Situ Tracking of Water Oxidation Generated Nanoscale Dynamics in Layered Double Hydroxides Nanosheets. Journal of the American Chemical Society, 146(25), 17032-17040. https://doi.org/10.1021/jacs.4c01035

Demircan, N., Sonmez, M. C., Akyol, T. Y., Ozgur, R., Turkan, I., Dietz, K. J. & Uzilday, B. (2024). Alternative electron sinks in chloroplasts and mitochondria of halophytes as a safety valve for controlling ROS production during salinity. Physiologia Plantarum, 176(3), Article e14397. https://doi.org/10.1111/ppl.14397

Allen, K., Brändle, F., Botvinick, M., Fan, J. E., Gershman, S. J., Gopnik, A., Griffiths, T. L., Hartshorne, J. K., Hauser, T. U., Ho, M. K., de Leeuw, J. R., Ma, W. J., Murayama, K., Nelson, J. D., van Opheusden, B., Pouncy, T., Rafner, J., Rahwan, I., Rutledge, R. B. ... Schulz, E. (2024). Using games to understand the mind. Nature Human Behaviour, 8(6), 1035-1043. https://doi.org/10.1038/s41562-024-01878-9

iPSYCH Consortium (2024). Phenotypic and ancestry-related assortative mating in autism. Molecular Autism, 15(1), 27. Article 27. https://doi.org/10.1186/s13229-024-00605-5

Chen, L., Ma, J., Xu, W., Shen, F., Yang, Z., Sonne, C., Dietz, R., Li, L., Jie, X., Li, L., Yan, G. & Zhang, X. (2024). Comparative transcriptome and methylome of polar bears, giant and red pandas reveal diet-driven adaptive evolution. Evolutionary Applications, 17(6), Article e13731. https://doi.org/10.1111/eva.13731

Yang, S. Y. & Skibsted, J. (2024). Sodium Sites and Hydration State in C-S-H Phases Synthesized under Alkaline Conditions from ¹H and ²³Na NMR Experiments. Journal of Physical Chemistry C, 128(26), 10888-10902. https://doi.org/10.1021/acs.jpcc.4c01982

Böckendorf, T., Kirschbaum, J., Kipke, F., Bougeard, D., Hansen, J. L., Larsen, A. N., Posselt, M. & Bracht, H. (2024). Experimental and theoretical studies on self-diffusion in amorphous germanium. AIP Advances, 14(6), Article 065129. https://doi.org/10.1063/5.0183578

Massier, L., Musat, N., Stumvoll, M., Tremaroli, V., Chakaroun, R. & Kovacs, P. (2024). Tissue-resident bacteria in metabolic diseases: emerging evidence and challenges. Nature Metabolism, 6(7), 1209-1224. https://doi.org/10.1038/s42255-024-01065-0

Schou, M. F. & Cornwallis, C. K. (2024). Adaptation to fluctuating temperatures across life stages in endotherms. Trends in Ecology and Evolution, 39(9), 841-850. https://doi.org/10.1016/j.tree.2024.05.012

Thomsen, S. R. & Goesten, M. (2024). Symmetry-Shaped Singularities in High-Temperature Superconductor H₃S. Journal of the American Chemical Society, 146(27), 18298-18305. https://doi.org/10.1021/jacs.4c02038

Lutze, M. & Madsen, M. (2024). Associated Effects: Flexible Abstractions for Effectful Programming. Proceedings of the ACM on Programming Languages , 8, Article 163. https://doi.org/10.1145/3656393

Pacyna-Kuchta, A. D., Souza-Kasprzyk, J., Garbus, S. E., Eulaers, I., Sonne, C. & Jakubas, D. (2024). Exploring avian exposure to parent polycyclic aromatic hydrocarbons (PAHs): Using the common eider Somateria mollissima in a global context. Science of the Total Environment, 945, Article 173801. https://doi.org/10.1016/j.scitotenv.2024.173801

Barnes, K., Juhász, P., Nagy, M. & Molontay, R. (2024). Topicality boosts popularity: a comparative analysis of NYT articles and Reddit memes. Social Network Analysis and Mining, 14(1), Article 119. https://doi.org/10.1007/s13278-024-01272-3

Roelofs, L., Conway, S. J., van Dam, B., van Eijk, A., Merrison, J. P., Iversen, J. J., Sylvest, M., Patel, M. R., Markies, H., van Maarseveen, M., McElwaine, J., Kleinhans, M. G. & de Haas, T. (2024). The Dynamics of CO₂-Driven Granular Flows in Gullies on Mars. Journal of Geophysical Research: Planets, 129(6), Article e2024JE008319. https://doi.org/10.1029/2024JE008319

Jensen, K. T., Nielsen, N. S., Viana Almeida, A., Thøgersen, I. B., Enghild, J. J. & Harwood, S. L. (2024). Proteolytic cleavage of the TGFβ co-receptor CD109 changes its conformation, resulting in protease inhibition via activation of its thiol ester, and dissociation from the cell membrane. FEBS journal, 291(14), 3169-3190. https://doi.org/10.1111/febs.17128

Yamamoto, K., Scilabra, S. D., Bonelli, S., Jensen, A., Scavenius, C., Enghild, J. J. & Strickland, D. K. (2024). Novel insights into the multifaceted and tissue-specific roles of the endocytic receptor LRP1. The Journal of Biological Chemistry, 300(8), Article 107521. https://doi.org/10.1016/j.jbc.2024.107521, https://doi.org/10.1016/j.jbc.2024.107521

Kasikov, A., Kolka, I., Aret, A., Eenmäe, T. & Checha, V. (2024). Yellow hypergiant V509 Cas: Stable in the yellow voida. Astronomy and Astrophysics, 686, Article A270. https://doi.org/10.1051/0004-6361/202348775

Deep Drilling in the Turkana Basin (DDTB) project team (2024). ICDP workshop on the Deep Drilling in the Turkana Basin project: exploring the link between environmental factors and hominin evolution over the past 4 Myr. Scientific Drilling, 33(2), 93-108. https://doi.org/10.5194/sd-33-93-2024

Zhang, X., Li, C., Yang, B., Wang, W., Zhao, J., Zhao, W., Dong, M. & Han, X. (2024). Functional Prototissues Using Artificial Cells as Building Blocks and Their Biomedical Applications. Advanced Functional Materials, 34(40), Article 2405823. https://doi.org/10.1002/adfm.202405823

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