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Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Corry, A. V., Gjerlufsen, T. & Olsen, J. W. (2005). The Stone: Digital Support for (Un)common Pregnancies. In 3rd Scandinavian conference on Health Informatics (3 ed., pp. 37-41). Aalborg University.
Danvy, O. & Goldberg, M. (2005). There and Back Again. Fundamenta Informaticae, 66(4), 397-413.
Richardson, K. (2005). Om statistik og orkaner. Jyllands-Posten.
Avgustinov, P., Christensen, A. S., Hendren, L., Kuzins, S., Lhot´ak, J., Lhot´ak, O., de Moor, O., Sereni, D., Sittampalam, G. & Tibble, J. (2005). Optimising AspectJ. In PLDI 2005 (pp. 117-128). Association for Computing Machinery.
Ernst, E., Ostermann, K. & Cook, W. R. (2005). A Virtual Class Calculus. Daimi Report Series (DAIMI PB), 577.
Allan, C., Avgustinov, P., Christensen, A. S., Hendren, L., Kuzins, S., Lhot´ak, O., de Moor, O., Sereni, D., Sittampalam, G. & Tibble, J. (2005). Adding Trace Matching with Free Variables to AspectJ. In Proc. 20th International Conference on Object-Oriented Programming Systems, Languages and Applications, OOPSLA 2005 (pp. 345-364)
Biernacki, D. P., Danvy, O. & Shan, C. (2006). On the Static and Dynamic Extents of Delimited Continuations. Science of Computer Programming, 60(3), 274-297.
Miltersen, P. B. & Sørensen, T. B. (2006). Computing Sequential Equilibria for Two-Player Games. In Proceedings of the Seventeenth Annual ACM-SIAM Symposium on Discrete Algorithms (1 ed., pp. 107-116). Association for Computing Machinery.
Danvy, O. & Nielsen, L. (2005). CPS Transformation of Beta-Redexes. Information Processing Letters, 94(5), 217-224. https://doi.org/10.1016/j.ipl.2005.02.002
Biernacki, D. & Danvy, O. (2006). A Simple Proof of a Folklore Theorem about Delimited Control. Journal of Functional Programming, 16(3), 269-280.
Zimmer, P. (2005). A Calculus for Context-Awareness. BRICS Report Series, (RS-05-27).
Biernacka, M. & Danvy, O. (2007). A Concrete Framework for Environment Machines. A C M Transactions on Computational Logic, 9(1), 1-30.
Ernst, E. (2005). Method Mixins. In NODe 2005 - GSEM 2005 (pp. 145-161). Stollfuß Medien.
Torgersen, M., Ernst, E. & Hansen, C. P. (2005). Wild FJ. In Proceedings of FOOL 12 http://homepages.inf.ed.ac.uk/wadler/fool/program/14.html
Ernst, E. (2005). The Hardship of Software. In Proceedings of the workshop 'Software Engineering Properties of Languages and Aspect Technologies 2005' The Aspect-Oriented Software Association.
Mosses, P. D. (2005). Modular Structural Operational Semantics. BRICS Report Series, (RS-05-7).
Møller-Nielsen, P. & Gejl, J. (2005). Room #2 (Guirlanden, Aarhus Kunstbygning). Poster session presented at Room #2 (Guirlanden, Aarhus Kunstbygning), Aarhus, Denmark.
Møller-Nielsen, P. & Gejl, J. (2006). Room #2 (Den gyldne, Charlottenborg Udstillingsbygning). Poster session presented at Room #2 (Den gyldne, Charlottenborg Udstillingsbygning), København, Denmark.
Møller-Nielsen, P. & Gejl, J. (2006). Room #2 (Kunsthallen Brænderigården). Poster session presented at Room #2 (Kunsthallen Brænderigården), Viborg, Denmark.
Selstø, S., McCann, J. F., Førre, M., Hansen, J. P. & Madsen, L. B. (2006). Geometrical dependence in photoionization of H2+ in high-intensity, high-frequency, ultrashortlaserpulses. Physical Review A, 73, 033407.
Donaldson, J. D. (2005). Naturvidenskab, matematik og matematiske modeller. In Almanak (pp. 97-107). Museum Tusculanum.
Saguez, C., Olesen, J. R. & Jensen, T. H. (2005). Formation of export competent mRNP: Escaping nuclear desctruction. Current Opinion in Cell Biology, 17, 287-293.
Madsen, B. A., Byskov, J. M. & Skjernaa, B. (2005). New Algorithms for Exact Satisfiability. Theoretical Computer Science, 332(1-3), 515-541.
Byskov, J. M., Madsen, B. A. & Skjernaa, B. (2005). On the Number of Maximal Bipartite Subgraphs of a Graph. Journal of Graph Theory, 48(2), 127-132.
Iversen, J. (2005). An Action Compiler Targeting Standard ML. In J. Boyland & G. Hedin (Eds.), Electronic Notes in Theoretical Computer Science (Vol. 141/4, pp. 167-188). Pergamon Press.
Lassen, M. F., Nielsen, K. D., Richardson, K., Ayala, M. D. P. C. D. A., Petersen, S. V., Buss, I. & Mogensen, H. (2005). Effekten af små temperaturændringer på vinterphytoplanktonets produktion on fysiologi (Bergen). Poster session presented at Dansk Havforskermøde, København, Denmark.
Bruhn, A., LaRoche, L. & Richardson, K. (2006). Emiliana huxleyi: genekspression ved nitratbegrænsning. Poster session presented at Dansk Havforskermøde, København, Denmark.
Kepp, R., Struve, A., Christiansen, C., Vang, T., Nielsen, M. H., Lund-Hansen, L. C., Pedersen, E., Bruhn, A., Richardson, K., Lassen, M. F., Casado, P. & Santaloria, L. (2005). Hydrografiens betydning for næringsstoftransport i Lillebælt. Poster session presented at Dansk Havforskermøde, København, Denmark.
Theut, M. L. U., Richardson, K. & Middelboe, M. (2005). Marint bakterieplankton. Et samfunds respons på en lille temperatur stigning. Poster session presented at Dansk Havforskermøde, København, Denmark.
Lassen, M. F., Richardson, K., Buss, I., Damm, V., Flensborg, L. & Nielsen, M. S. (2005). Mesocosmos undersøgelser af klimaændringers effekt og vinterphytoplankton. Poster session presented at Dansk Havforskermøde, København, Denmark.
Bisgaard, C. & Madsen, L. B. (2004). Tunneling ionization of atoms. American Journal of Physics, 72, 249.
Thomsen, J. & Husemann, D. (2006). Evaluating the Use of Motes and TinyOS for a Mobile Sensor Platform. In T. Fahringer (Ed.), Proceedings of the IASTED International Conference on Parallel and Distributed Computing and Networks (pp. 95-100). ACTA Press.
Thomsen, J. (2006). OSGi-based Gateway Replication. In N. Guimarães, P. Isaías & A. Goikoetxea (Eds.), Proceedings of the IADIS Applied Computing Conference 2006 (pp. 123-129). International Association for Development, IADIS.

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Normand, S., Forchhammer, M. C., Høye, T. T., Jeppesen, E. & Svenning, J.-C. (2012). Grønlands biodiversitet: klimaets betydning i fortid, nutid og fremtid. In M. Akhøj Nielsen (Ed.), Grønlands fascinationskraft: Fortællinger om polarforskningen (pp. 148-162). Det Kongelige Danske Videnskabernes Selskab.
Temkiv, T. S., Finster, K., Dittmar, T., Hansen, B. M., Thyrhaug, R., Nielsen, N. W. & Karlson, U. G. (2012). Hailstones: a window into microbial life in storm clouds. Abstract from ISME Conference 2012, København, Denmark.
Temkiv, T. S., Finster, K., Dittmar, T., Hansen, B. M., Thyrhaug, R., Nielsen, N. W. & Gosewinkel, U. B. (2012). Hailstones: a window into microbial life in storm clouds. Poster session presented at ISME Conference 2012, København, Denmark.
Dalsgaard, B., Timmermann, A., Martín, A. M. G., Olesen, J. M., Ollerton, J. & Andersen, L. H. (2012). Heliconia-hummingbird interactions in the Lesser Antilles: a geographic mosaic? Caribbean Journal of Science, 46.
Revsbech, I. G., Weber, R. E., Storz, J. F. & Fago, A. (2012). Hibernating golden mantled ground squirrel Spermophilus lateralis: Temperature rather than 2,3-DPG underlies increased hemoglobin O2 affinity. Abstract from XVII International Conference on Oxygen Binding and Sensing Proteins, Parma, Italy.
Tervo, O. M., Christoffersen, M. F., Simon, M., Miller, L. A., Jensen, F. H., Parks, S. E. & Madsen, P. P. T. (2012). High Source Levels and Small Active Space of High-Pitched Song in Bowhead Whales (Balaena mysticetus). PLoS One, 7(12), e52072. https://doi.org/10.1371/journal.pone.0052072
Baisner, A. J., Riis, T. & Baattrup-Pedersen, A. (2012). How do macrophytes affect stream function?. Abstract from International Symposium on Aquatic Plants, Poznan, Poland.
Schurr, F. M., Pagel, J., Cabral, J. S., Groeneveld, J., Bykova, O., O'Hara, R. B., Hartig, F., Kissling, W. D., Linder, H. P., Midgley, G. F., Schröder, B., Singer, A. & Zimmermann, N. E. (2012). How to understand species' niches and range dynamics: a demographic research agenda for biogeography. Journal of Biogeography, 39(12), 2146-2162. https://doi.org/10.1111/j.1365-2699.2012.02737.x
Calabria, G., Dolgova, O., Rego, C., Castañeda, L. E., Rezende, E. L., Balanya, J., Pascual, M., Sørensen, J. G., Loeschcke, V. & Santos, M. (2012). Hsp70 protein levels and thermotolerance in Drosophila subobscura: a reassessment of the thermal co-adaptation hypothesis. Journal of Evolutionary Biology, 25(4), 691-700. https://doi.org/10.1111/j.1420-9101.2012.02463.x
Høye, T. T., Ejrnæs, R., Dalgaard, T., Svenning, J.-C. & Topping, C. J. (2012). Hvordan sikrer vi agerlandets biodiversitet? In H. Meltofte (Ed.), Danmarks Natur frem mod 2020 (pp. 49-53). Danmarks Naturfredningsforening.
Skov, F., Svenning, J.-C. & Rahbek, C. (2012). Hvordan sikrer vi biodiversiteten under fremtidens klimaforandringer? In H. Meltofte (Ed.), Danmarks Natur frem mod 2020 (pp. 71-76). Danmarks Naturfredningsforening.
Jensen, N. S. & Olson, K. R. (2012). Hydrogen sulfide mediates hypoxic vasoconstriction through a production of mitochondrial ROS in trout gills. American Journal of Physiology: Regulatory, Integrative and Comparative Physiology, 303, R487-R494. https://doi.org/10.1152/ajpregu.00151.2012
Jensen, B., Boukens, B. J. D., Postma, A. V., Gunst, Q. D., van den Hoff, M. J. B., Moorman, A. F. M., Wang, T. & Christoffels, V. M. (2012). Identifying the Evolutionary Building Blocks of the Cardiac Conduction System. PLoS One, 7. https://doi.org/10.1371/journal.pone.0044231
Hartmann, S., Temkiv, T. S., Pummer, B., Augustin, S., Clauss, T., Niedermeier, D., Wex, H., Voigtländer, J., Gosewinkel, U. B., Grothe, H. & Stratmann, F. (2012). Immersion freezing of biological particles. Poster session presented at European Aerosol Conference 2012, Malaga, Spain.
Hartmann, S., Augustin, S., Temkiv, T. S., Gosewinkel, U. B., Clauss, T., Niedermeier, D., Wex, H., Voigtländer, J. & Stratmann, F. (2012). Immersion freezing of biological particles investigated at LACIS. Poster session presented at 16th International Conference on Clouds and Precipitation, Leipzig, Germany.
Cockell, C. S., Voytek, M. A., Gronstal, A. L., Finster, K., Kirshtein, J. D., Howard, K., Reitner, J., Gohn, G. S., Sanford, W. E., Horton, Jr., J. W., Kallmeyer, J., Kelly, L. & Powars, D. S. (2012). Impact disruption and recovery of the deep subsurface biosphere. Astrobiology, 12(3). https://doi.org/10.1089/ast.2011.0722
Istenic, D., Arias, C. A., Vollertsen, J., Nielsen, A. H., Wium-Andersen, T., Hvitved-Jacobsen, T. & Brix, H. (2012). Improved urban stormwater treatment and pollutant removal pathways in amended wet detention ponds. Journal of Environmental Science and Health. Part A: Toxic Hazardous Substances and Environmental Engineering, 47(10), 1466-1477. https://doi.org/10.1080/10934529.2012.673306
Holmstrup, M., Sørensen, J. G., Maraldo, K., Schmidt, I. K., Mason, S., Tietema, A., Smith, A. R., Emmett, B., Schmelz, R., Bataillon, T., Beier, C. & Ehlers, B. K. (2012). Increased frequency of drought reduces species richness of enchytraeid communities in both wet and dry heathland soils. Soil Biology & Biochemistry, 53, 43-49. https://doi.org/10.1016/j.soilbio.2012.05.001
Steinbauer, M., Otto, R., Naranjo-Cigala, A., Beierkuhnlein, C. & Fernandez-Palacios, J.-M. (2012). Increase of island endemism with altitude - speciation processes on oceanic islands. Ecography, 35(1), 23-32. https://doi.org/10.1111/j.1600-0587.2011.07064.x
Thirstrup, J. P., Nielsen, V. H., Larsen, P. F. & Pertoldi, C. (2012). Indavl, krydsning og kuldstørrelse i en 7-generationers minkpopulation. In S. W. Hansen & B. M. Damgaard (Eds.), Temadag om aktuel minkforskning (Vol. 010, pp. 38-42). DCA - Nationalt Center for Fødevarer og Jordbrug.
Scally, A., Dutheil, J. Y., Hillier, L. W., Jordan, G. E., Goodhead, I., Herrero, J., Hobolth, A., Lappalainen, T., Mailund, T., Marques-Bonet, T., McCarthy, S., Montgomery, S. H., Schwalie, P. C., Tang, Y. A., Ward, M. C., Xue, Y., Yngvadottir, B., Alkan, C., Andersen, L. N. ... Durbin, R. (2012). Insights into hominid evolution from the gorilla genome sequence. Nature, 483(7388), 169-75. https://doi.org/10.1038/nature10842
Wasmund, K., Algora, C., Cooper, M., Schreiber, L., Lloyd, K., Petersen, D. G., Reinhardt, R., Jørgensen, B. B., Schramm, A. & Adrian, L. (2012). Insights into the ecological distributions and genomes of the enigmatic and widely distributed marine subsurface "Dehalococcoidetes" (phylum Chloroflexi). Abstract from 14th International Symposium on Microbial Ecology, Copenhagen, Denmark.
Wangpraseurt, D., Weber, M., Røy, H., Polerecky, L., DeBeer, D., Suharsono & Nugues, M. (2012). In Situ Oxygen Dynamics in Coral-Algal Interactions. PLoS One, 7/2(e31192), 1-8. https://doi.org/10.1371
Fago, A., B. Jensen, F., Tota, B., Feelisch, M., R. Olsen, K., Helbo, S., Lefevre, S., Mancardi, D., Palumbo, A., K. Sandvik, G. & Skovgaard, N. (2012). Integrating nitric oxide, nitrite and hydrogen sulfide signaling in the physiological adaptions to hypoxia: A comparative approach. Comparative Biochemistry and Physiology - Part A: Molecular & Integrative Physiology, 162(1), 1-6. https://doi.org/10.1016/j.cbpa.2012.01.011
Kissling, W. D., Eiserhardt, W. L., Baker, W. J., Borchsenius, F., Couvreur, T. L. P., Balslev, H. & Svenning, J.-C. (2012). Integrating paleo-reconstructions, phylogenies and species distribution data to elucidate deep-time imprints on species assemblages worldwide. Abstract from 42nd annual meeting "From Basic Ecology to the Challenges of Modern Society", Lüneburg, Germany.
Andrén, T., Jørgensen, B. B., Cotterill, C. & Morgan, S. (2012). IODP Expedition 347: Paleoenvironmental evolution of the Baltic Sea Basin through the last glacial cycle. ECORD Newsletter European Consortium for Ocean Research Drilling, (19), 14,15,23.