Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Asmussen, J. D., Ben Ltaief, L., Sishodia, K., Abid, A. R., Bastian, B., Krishnan, S., Pedersen, H. B. & Mudrich, M. (2023). Dopant ionization and efficiency of ion and electron ejection from helium nanodroplets. Journal of Chemical Physics, 159(3), Article 034301. https://doi.org/10.1063/5.0160171

Lamhauge, J. N., McLeod, D., Barløse, C., Oliver, G., Viborg, L., Warburg, T. & Jørgensen, K. A. (2023). Enantioselective Synthesis of Tropane Scaffolds by an Organocatalyzed 1,3-Dipolar Cycloaddition of 3-Oxidopyridinium Betaines and Dienamines. Chemistry - A European Journal, 29(49), Article e202301830. https://doi.org/10.1002/chem.202301830

Bavnhøj, L., Driller, J. H., Zuzic, L., Stange, A. D., Schiøtt, B. & Pedersen, B. P. (2023). Structure and sucrose binding mechanism of the plant SUC1 sucrose transporter. Nature Plants, 9(6), 938-950. https://doi.org/10.1038/s41477-023-01421-0

Ung, K. L., Schulz, L., Kleine-Vehn, J., Pedersen, B. P. & Hammes, U. Z. (2023). Auxin transport at the endoplasmic reticulum: Roles and structural similarity of PIN-FORMED and PIN-LIKES. Journal of Experimental Botany, 74(22), 6893-6903. https://doi.org/10.1093/jxb/erad192

Ramos Docampo, M. A. (2023). On Nanomachines and Their Future Perspectives in Biomedicine. Advanced Biology, 7(4), Article 2200308. https://doi.org/10.1002/adbi.202200308

Jensen, B. B., Rosenberg, L., Tsitonaki, A., Tuxen, N., Bjerg, P. L., Nielsen, L., Hansen, T. M. & Looms, M. C. (2023). High-Resolution Geological Information from Crosshole Ground Penetrating Radar in Clayey Tills. Groundwater Monitoring and Remediation, 43(4), 55-66. https://doi.org/10.1111/gwmr.12588

Madsen, R. B., Høyer, A.-S., Sandersen, P. B. E., Møller, I. & Hansen, T. M. (2023). A method to construct statistical prior models of geology for probabilistic inversion of geophysical data. Engineering Geology, 324, Article 107252. https://doi.org/10.1016/j.enggeo.2023.107252

Lorentzen, J., Olesen, H. G., Hansen, A. G., Thiel, S., Birkelund, S., Andersen, C. B. F. & Andersen, G. R. (2023). Trypanosoma brucei Invariant Surface gp65 Inhibits the Alternative Pathway of Complement by Accelerating C3b Degradation. Journal of Immunology, 211(5), 862-873. https://doi.org/10.4049/jimmunol.2300128

Ingman, E. R., Laurinavicius, D., Zhang, J., Schrauwen, J. G. M., Redlich, B., Noble, J. A., Ioppolo, S., McCoustra, M. R. S. & Brown, W. A. (2023). Infrared photodesorption of CO from astrophysically relevant ices studied with a free-electron laser. Faraday Discussions, 245, 446-466 . https://doi.org/10.1039/d3fd00024a

Chen, Y., Gelder, M. L. V., Nazari, P., Brogan, C. L., Dishoeck, E. F. V., Linnartz, H., Jørgensen, J. K., Hunter, T. R., Wilkins, O. H., Blake, G. A., Caselli, P., Chuang, K. .-J., Codella, C., Cooke, I., Drozdovskaya, M. N., Garrod, R. T., Ioppolo, S., Jin, M., Kulterer, B. M. ... McGuire, B. A. (2023). CoCCoA: Complex Chemistry in hot Cores with ALMA. Selected oxygen-bearing species.

Shaik, I., Heisinger, M., Seidl, M. & Pol, J. V. D. (2023). Validation of QBF Encodings with Winning Strategies. Leibniz International Proceedings in Informatics, 271. https://doi.org/10.4230/LIPIcs.SAT.2023.24

Larsen, C. A., Schmidt, S. M., Steensgaard, J., Jakobsen, A. B., Pol, J. V. D. & Pavlogiannis, A. (2023). A Truly Symbolic Linear-Time Algorithm for SCC Decomposition. In S. Sankaranarayanan & N. Sharygina (Eds.), Tools and Algorithms for the Construction and Analysis of Systems: 29th International Conference, TACAS 2023, Held as Part of the European Joint Conferences on Theory and Practice of Software, ETAPS 2023, Paris, France, April 22–27, 2023, Proceedings, Part II (pp. 353-371). Springer. https://doi.org/10.1007/978-3-031-30820-8_22

Madsen, M. & Pol, J. V. D. (2023). Programming with Purity Reflection: Peaceful Coexistence of Effects, Laziness, and Parallelism. In K. Ali & G. Salvaneschi (Eds.), 37th European Conference on Object-Oriented Programming (ECOOP 2023) Article 18 Dagstuhl Publishing. https://doi.org/10.4230/LIPIcs.ECOOP.2023.18

Bennike, O., Odgaard, B., Wiberg-Larsen, P. & Nørgaard-Pedersen, N. (2023). Submarine lateglacial lake deposits from jutland bank, the north sea. Quaternary International, 669, 12-19. https://doi.org/10.1016/j.quaint.2023.05.021

Ulmer, A., Heilrath, A., Senfftleben, B., O'Connell-Lopez, S. M. O., Kruse, B., Seiffert, L., Kolatzki, K., Langbehn, B., Hoffmann, A., Baumann, T. M., Boll, R., Chatterley, A. S., De Fanis, A., Erk, B., Erukala, S., Feinberg, A. J., Fennel, T., Grychtol, P., Hartmann, R. ... Tanyag, R. M. P. (2023). Generation of Large Vortex-Free Superfluid Helium Nanodroplets. Physical Review Letters, 131(7), Article 076002. https://doi.org/10.1103/PhysRevLett.131.076002

Andresen, J.-B. R. & Kristiansen, S. M. (2023). Historic maps as source for hydrological reconstruction of pre-industrial landscape wetness in Denmark: a methodological study. Aarhus Universitet. https://doi.org/10.7146/aul.491

Johansen, M. B., Donslund, B. S., Larsen, E., Olsen, M. B., Pedersen, J. A. L., Boye, M., Smedsgård, J. K. C., Heck, R., Kristensen, S. K. & Skrydstrup, T. (2023). Closed-Loop Recycling of Polyols from Thermoset Polyurethanes by tert-Amyl Alcohol-Mediated Depolymerization of Flexible Foams. ACS Sustainable Chemistry and Engineering, 11(29), 10737–10745. https://doi.org/10.1021/acssuschemeng.3c01469

Zhao, R., Wittig, N. K., De Angelis, G., Yuan, T., Hirsch, M., Birkedal, H. & Amstad, E. (2023). Additive Manufacturing of Porous Biominerals. Advanced Functional Materials, 33(37), Article 2300950. https://doi.org/10.1002/adfm.202300950

Jafarzadeh, M. & Daasbjerg, K. (2023). Rational Design of Heterogeneous Dual-Atom Catalysts for CO₂ Electroreduction Reactions. ACS Applied Energy Materials, 6(13), 6851–6882. https://doi.org/10.1021/acsaem.3c00781

Fomete, S. K. W., Kubečka, J., Elm, J. & Jen, C. N. (2023). Limited Role of Malonic Acid in Sulfuric Acid-Dimethylamine New Particle Formation. ACS Omega, 8(22), 19807-19815. https://doi.org/10.1021/acsomega.3c01643

Greve, R. D. & Jensen, H. H. (2023). Lewis Acid Promoted Deprotection of Benzylidene Acetals and p-Methoxybenzyl Ethers with Mercaptoacid Acid as Scavenger. Organic Letters, 25(20), 3628-3632. https://doi.org/10.1021/acs.orglett.3c00958

Zhou, C., Yan, Y. & Jensen, T. R. (2023). Enhanced Electrochemical Performance of the Li₂B₁₂H₁₂-Li₂B₁₀H₁₀-LiBH₄ Electrolyte. ACS Applied Energy Materials, 6(14), 7346–7352. https://doi.org/10.1021/acsaem.3c00411

Drejer, A. Ø., Pedersen, M. S., Johansen, M. & Ravnsbæk, D. B. (2023). Local and Global Structures in the Phase Evolution of P2-Na_xFe_yMn_1-yO₂ Electrodes for Na-Ion Batteries. ACS Applied Energy Materials, 6(9), 4909-4921. https://doi.org/10.1021/acsaem.3c00387

Sinha, V., Rezai, F., Sahin, N. E., Catalano, J., Bøjesen, E. D., Sotoodeh, F. & Dražević, E. (2022). Electrochemical nitrogen reduction reaction over gallium - a computational and experimental study. Faraday Discussions, 243, 307-320 . https://doi.org/10.1039/d2fd00169a

Bregnhøj, M., Jensen, S. J. K., Strunge, K., Nielsen, A. B., Thøgersen, J., Nørnberg, P., Skibsted, J. & Finster, K. (2023). Carbon Dioxide Sequestration by Triboelectric Charging of Tumbling Quartz Sand. Journal of Physical Chemistry C, 127(25), 12008-12015. https://doi.org/10.1021/acs.jpcc.3c02008

Tesson, S. V. M., Barbato, M. & Rosati, B. (2023). Aerosolization flux, bio-products, and dispersal capacities in the freshwater microalga Limnomonas gaiensis (Chlorophyceae). Communications Biology, 6(1), Article 809. https://doi.org/10.1038/s42003-023-05183-5

Wu, Y., Walker, J. R., Westberg, M., Ning, L., Monje, M., Kirkland, T. A., Lin, M. Z. & Su, Y. (2023). Kinase-Modulated Bioluminescent Indicators Enable Noninvasive Imaging of Drug Activity in the Brain. ACS Central Science, 9(4), 719-732. https://doi.org/10.1021/acscentsci.3c00074

Schneider, R., Noordujin, S., Mahmood, H., Stisen, S. & Hojberg, A. L. (2023). Improving drain flow simulations in a national hydrological model with machine learning estimates of drain fraction. Abstract from EGU General Assembly 2023, Vienna , Austria.

Ciobotaru, C.-G., Kramer, L. & Schwer, P. (2023). Polyhedral compactifications, I. Advances in Geometry, 23(3), 413-436. https://doi.org/10.1515/advgeom-2023-0018

Xu, T., Tang, X., Qiu, M., Lv, X., Shi, Y., Zhou, Y., Xie, Y., Naushad, M., Lam, S. S., Ng, H. S., Sonne, C. & Ge, S. (2023). Degradation of levofloxacin from antibiotic wastewater by pulse electrochemical oxidation with BDD electrode. Journal of Environmental Management, 344, Article 118718. https://doi.org/10.1016/j.jenvman.2023.118718

Grønbæk, J. E., Borowski, M., Hoggan, E., Mackay, W., Beaudouin-Lafon, M. & Klokmose, C. N. (2023). Mirrorverse: Live Tailoring of Video Conferencing Interfaces. In S. Follmer, J. Han, J. Steimle & N. Henry Riche (Eds.), UIST '23: Proceedings of the 36th Annual ACM Symposium on User Interface Software and Technology Article 14 Association for Computing Machinery. https://doi.org/10.1145/3586183.3606767

Dahl, M. B. (2023). MathiasBusk/HYDROsim-paper: Github Repository. Dataset, Zenodo. https://doi.org/10.5281/zenodo.7711227

Newton, A., Andresen, K. J., Blacker, K., Harding, R. & Lebas, E. (2024). Seismic Geomorphology: Subsurface Analyses, Data Integration and Palaeoenvironment Reconstructions – an Introduction. In A. M. W. Newton, K. J. Andresen, K. J. Blacker, R. Harding & E. Lebas (Eds.), Seismic Geomorphology: Subsurface Analyses, Data Integration and Palaeoenvironment Reconstructions (1 ed., Vol. 525, pp. 1-11). Geological Society. https://doi.org/10.1144/SP525-2023-108

Aznarez, C., Svenning, J.-C., Pacheco Esnal, J. P., Kallesøe, F. H., Baró, F. & Pascual, U. (2023). Luxury and legacy effects on urban biodiversity, vegetation cover and ecosystem services. npj Urban Sustainability, 3(1), Article 47. https://doi.org/10.1038/s42949-023-00128-7

Fehér, B., Wacha, A., Jezsó, B., Bóta, A., Pedersen, J. S. & Varga, I. (2023). The evolution of equilibrium poly(styrene sulfonate) and dodecyl trimethylammonium bromide supramolecular structure in dilute aqueous solution with increasing surfactant binding. Journal of Colloid and Interface Science, 651, 992-1007. https://doi.org/10.1016/j.jcis.2023.08.002

Martin, M., Nilsson, S. C., Eikrem, D., Fromell, K., Scavenius, C., Vogt, L. M., Bielecka, E., Potempa, J., Enghild, J. J., Nilsson, B., Ekdahl, K. N., Kapetanovic, M. C. & Blom, A. M. (2023). Citrullination of C1-inhibitor as a mechanism of impaired complement regulation in rheumatoid arthritis. Frontiers in Immunology, 14, Article 1203506. https://doi.org/10.3389/fimmu.2023.1203506

Desai, D. D., Ashall, C., Shappee, B. J., Morrell, N., Galbany, L., Burns, C. R., Derkacy, J. M., Hinkle, J. T., Hsiao, E., Kumar, S., Lu, J., Phillips, M. M., Shahbandeh, M., Stritzinger, M. D., Baron, E., Bersten, M. C., Brown, P. J., De Jaeger, T., Elias-Rosa, N. ... Young, D. R. (2023). Fast and not-so-furious: Case study of the fast and faint Type IIb SN 2021bxu. Monthly Notices of the Royal Astronomical Society, 524(1), 767-785. https://doi.org/10.1093/mnras/stad1932

Larsen, K. E. (2023). Monodon monoceros rhodopsin (RHO) mRNA, complete cds. GenBank Accession No. OQ632457. Dataset

Larsen, K. E. (2023). Balaena mysticetus rhodopsin (RHO) mRNA, complete cds. GenBank Accession No. OQ632458. Dataset

Kelly, S., Hansen, S. B., Rübsam, H., Saake, P., Pedersen, E. B., Gysel, K., Madland, E., Wu, S., Wawra, S., Reid, D., Sullivan, J. T., Blahovska, Z., Vinther, M., Muszynski, A., Azadi, P., Thygesen, M. B., Aachmann, F. L., Ronson, C. W., Zuccaro, A. ... Stougaard, J. (2023). A glycan receptor kinase facilitates intracellular accommodation of arbuscular mycorrhiza and symbiotic rhizobia in the legume Lotus japonicus. PLoS Biology, 21(5), Article e3002127. https://doi.org/10.1371/journal.pbio.3002127

Bjerge, K., Alison, J., Dyrmann, M., Frigaard, C. E., Mann, H. M. R. & Høye, T. T. (2023). Accurate detection and identification of insects from camera trap images with deep learning. PLOS Sustainability and Transformation, 2(3), Article e0000051. https://doi.org/10.1371/journal.pstr.0000051

Lauritzen, N. & Thomsen, J. F. (2023). Finitely generated bimodules over Weyl algebras. https://arxiv.org/abs/2308.09384

Reiß, M., Strauch, C. & Trottner, L. (2023). Change point estimation for a stochastic heat equation.

Trottner, L. (2024). Covariate shift in nonparametric regression with Markovian design. Information and Inference, 13(2), Article iaae011. https://doi.org/10.1093/imaiai/iaae011

Döring, L., Trottner, L. & Watson, A. R. (2024). Markov additive friendships. Transactions of the American Mathematical Society, 377(11), 7699-7752. https://doi.org/10.1090/tran/9266

Marandi, A., Alves, P. G. M. R., Aranha, D. F. & Jacobsen, R. H. (2024). Lattice-based Homomorphic Encryption for Privacy-Preserving Smart Meter Data Analytics. The Computer Journal, 67(5), 1687-1698. https://doi.org/10.1093/comjnl/bxad093