Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Dam, S., Dyrlund, T. F., Ussatjuk, A., Jochimsen, B., Nielsen, K., Goffard, N., Ventosa, M. A. L., Lorentzen, A. M., Gupta, V., Andersen, S. U., Enghild, J. J., Ronson, C. W., Roepstorff, P. & Stougaard, J. (2014). Proteome reference maps of the Lotus japonicus nodule and root. Proteomics, 14(2-3), 230-240. https://doi.org/10.1002/pmic.201300353

Hahn, U. (2013). plutils: an R package for plotting with style. Computer programme, R-Forge. https://r-forge.r-project.org/R/?group_id=1763

Poulsen, E. T., Runager, K., Risør, M. W., Dyrlund, T. F., Scavenius, C., Karring, H., Praetorius, J., Vorum, H., Otzen, D. E., Klintworth, G. K. & Enghild, J. J. (2014). Comparison of two phenotypically distinct lattice corneal dystrophies caused by mutations in the transforming growth factor beta induced (TGFBI) gene. Proteomics - Clinical Applications, 8(3-4), 168-177. https://doi.org/10.1002/prca.201300058

Hahn, U. (2013). fdnonpar: an R package for statistical analysis of multivariate or functional data.. Computer programme, R-Forge. https://r-forge.r-project.org/R/?group_id=1763

Hahn, U. (2013). sostatpp: an R-package for analysis of hidden second-order stationary point processes. Computer programme, R-Forge. https://r-forge.r-project.org/R/?group_id=1763

Laustsen, P. G., Rasmussen, T. E., Petersen, K., Moestrup, S., Gliemann, J., Sottrup-Jensen, L. & Kristensen, T. (1996). Molecular cloning of a novel human placental aminopeptidase. Abstract from 24th Meeting of the Federation of European Biochemical Societies, Barcelona, Spain.

Rasmussen, T., Laustsen, P. G. & Kristensen, T. (1996). Localization of the gene for a novel human aminopeptidase to chromosome 5q21. Abstract from 24th Meeting of the Federation of European Biochemical Societies, Barcelona, Spain.

Kristensen, T., Rasmussen, T. E., Pedraza, S. & Laustsen, P. G. (1997). The Complete Amino Acid Sequence of Human Placental Aminopeptidase. Abstract from 17th International Congress of Biochemistry and Molecular Biology, San Francisco, CA, United States.

Rasmussen, T. E., Kristensen, T., Pedraza-Díaz, S., Hadré, R., Laustsen, P. G. & Carrion, A. G. (1998). Molecular Cloning of the Human Oxytocinase/Insulin-Responsive Aminopeptidase Gene. The FASEB Journal, 12(4), Article A360.

Laustsen, P. G. & Kristensen, T. (1998). Identification of a new conserved motif important for activity of human oxytocinase/insulin responsive aminopeptidase. Experimental Biology 98, San Francisco, CA, April 18-22, 1998. FASEB J. 12(4), A441.

Haagerup, A., Kristensen, T. & Kruse, T. A. (1991). Polymorphism and genetic mapping of the gene encoding human beta-2-glycoprotein I to chromosome 17. Cytogenetics and Cell Genetics, 58, 58.

Hansen, D. C., Bassler, N., Petersen, J. B. B. & Sørensen, T. S. (2014). Improved proton computed tomography by dual modality image reconstruction. Medical Physics, 41(3), Article 031904 . https://doi.org/10.1118/1.4864239

Hackenberg, T., Juul, T., Auzina, A., Gwizdz, S., Malolepszy, A., Van Der Kelen, K., Dam, S., Bressendorff, S., Lorentzen, A. M., Roepstorff, P., Lehmann Nielsen, K., Jørgensen, J.-E., Hofius, D., Van Breusegem, F., Petersen, M. & Andersen, S. U. (2013). Catalase and NO CATALASE ACTIVITY1 Promote Autophagy-Dependent Cell Death in Arabidopsis. Plant Cell, 25(11), 4616-4626. https://doi.org/10.1105/tpc.113.117192

Dam, S. S., Thaysen-Andersen, M., Stenkjær, E., Lorentzen, A. M., Roepstorff, P., Packer, N. H. & Stougaard, J. (2013). Combined N-glycome and N-glycoproteome analysis of the Lotus japonicus seed globulin fraction shows conservation of protein structure and glycosylation in legumes. Journal of Proteome Research, 12(7), 3383-3392. https://doi.org/10.1021/pr400224s

Svane, A. & Christensen, N. E. (2013). Quasi particle self-consistent GW calculations for Actinides and Hg semiconductors. Abstract from Electronic Structure Approaches to Atoms, Molecules, Clusters and Solids, Hyderabad, India.

Svane, A. & Christensen, N. E. (2013). Electronic quasiparticle states of PbX (X=S, Se, Te) and SnTe. Abstract from Electronic Structure Approaches to Atoms, Molecules, Clusters and Solids, Hyderabad, India.

Xuereb, A., Genes, C., Pupillo, G., Paternostro, M. & Dantan, A. R. (2014). Reconfigurable long-range phonon dynamics in optomechanical arrays. Physical Review Letters, 112, 133604. https://doi.org/10.1103/PhysRevLett.112.133604

Frederiksen, M., Bochenkov, V., Ogaki, R. & Sutherland, D. S. (2013). Onset of Bonding Plasmon Hybridization Preceded by Gap Modes in Dielectric Splitting of Metal Disks. Nano Letters, 13(12), 6033-6039. https://doi.org/10.1021/nl4032567

Frederiksen, M. & Sutherland, D. S. (2014). Direct modification of colloidal hole-masks for locally ordered hetero-assemblies of nanostructures over large areas. Nanoscale, 6(2), 731-735. https://doi.org/10.1039/C3NR03871H

Paszota, P., Escalante-Perez, M., Thomsen, L. R., Risør, M. W., Dembski, A., Sanglas, L., Nielsen, T. A., Karring, H., Thøgersen, I. B., Hedrich, R., Enghild, J. J., Kreuzer, I. & Sanggaard, K. W. (2014). Secreted major Venus flytrap chitinase enables digestion of Arthropod prey. BBA General Subjects, 1844(2), 374–383. https://doi.org/10.1016/j.bbapap.2013.11.009

Jensen, R. L., Holmegaard, L. & Ogilby, P. R. (2013). Temperature Effect on Radiative Lifetimes: The Case of Singlet Oxygen in Liquid Solvents. Journal of Physical Chemistry Part B: Condensed Matter, Materials, Surfaces, Interfaces & Biophysical, 117(50), 16227-16235. https://doi.org/10.1021/jp410185n

Nielsen, K. H. (2014). ‘What things mean in our daily lives’: a history of museum curating and visiting in the Science Museum's Children's Gallery from c.1929 to 1969. British Journal for the History of Science, 47(3), 505-538. https://doi.org/10.1017/S0007087413000940

Thorgeirsson, T. E., Gudbjartsson, D. F., Sulem, P., Besenbacher, S., Styrkarsdottir, U., Thorleifsson, G., Walters, G. B., Furberg, H., Sullivan, P. F., Marchini, J., McCarthy, M. I., Steinthorsdottir, V., Thorsteinsdottir, U., Stefansson, K. & TAG Consortium (2013). A common biological basis of obesity and nicotine addiction. Translational Psychiatry, 3, e308. https://doi.org/10.1038/tp.2013.81

Andersson, M., Mattle, D., Sitsel, O., Klymchuk, T., Nielsen, A. M., Møller, L. B., White, S. H., Nissen, P. & Gourdon, P. (2014). Copper-transporting P-type ATPases use a unique ion-release pathway. Nature Structural and Molecular Biology, 21, 43-48. https://doi.org/10.1038/nsmb.2721

Greve, M., Reyers, B., Lykke, A. M. & Svenning, J.-C. (2013). Spatial optimization of carbon-stocking projects across Africa integrating stocking potential with co-benefits and feasibility. Nature Communications, 4, Article 2975. https://doi.org/10.1038/ncomms3975

Høyer, A.-S., Jørgensen, F., Piotrowski, J. A. & Jakobsen, P. R. (2013). Deeply rooted glaciotectonism in western Denmark: Geological composition, structural characteristics and the rigin of Varde hill-island. Journal of Quaternary Science, 28(7), 683-696. https://doi.org/10.1002/jqs.2667

Damsgaard, A., Egholm, D. L., Piotrowski, J. A., Tulaczyk, S., Larsen, N. K. & Tylmann, K. (2013). Discrete element modeling of subglacial sediment deformation. Journal of Geophysical Research: Earth Surface, 118, 2230-2242. https://doi.org/10.1002/2013JF002830

Narloch, W. & Piotrowski, J. A. (2013). Mikromorfologia glin lodowcowych jako narzędzie w rekonstrukcji procesów subglacjalnych (Micromorphology of tills as a tool in reconstructing subglacial processes). Przeglad Geologiczny, 61(5), 294-303. http://www.pgi.gov.pl/en/dokumenty-in/doc_view/1785-mikromorfologia-glin-lodowcowych.html

Narloch, W., Wysota, W. & Piotrowski, J. A. (2013). Sedimentological record of subglacial conditions and ice sheet dynamics of the Vistula Ice Stream (north-central Poland) during the Last Glaciation. Sedimentary Geology, 293, 30-44. https://doi.org/10.1016/j.sedgeo.2013.05.001

Menzies, J. & Piotrowski, J. A. (2013). Subglacial environments: Introduction. Boreas, 42(2), 374-375. https://doi.org/10.1111/bor.12011

Tylmann, K., Piotrowski, J. A. & Wysota, W. (2013). The ice/bed interface mosaic: deforming spots intervening with stable areas under the fringe of the Scandinavian Ice Sheet at Sampława, Poland. Boreas, 42(2), 428-441. https://doi.org/10.1111/j.1502-3885.2012.00294.x

Damsgaard, A., Egholm, D. L., Piotrowski, J. A., Tulaczyk, S. & Larsen, N. K. (2013). Discrete element modeling of subglacial sediment deformation. Abstract from American Geophysical Union Fall Meeting, San Francisco, United States.

Favaro, F. P., Alvizi, L., Zechi-Ceide, R. M., Bertola, D., Felix, T. M., de Souza, J., Raskin, S., Twigg, S. R. F., Weiner, A. M. J., Armas, P., Margarit, E., Calcaterra, N. B., Andersen, G. R., McGowan, S. J., Wilkie, A. O. M., Richieri-Costa, A., de Almeida, M. L. G. & Passos-Bueno, M. R. (2013). A Noncoding Expansion in EIF4A3 Causes Richieri-Costa-Pereira Syndrome, a Craniofacial Disorder Associated with Limb Defects. American Journal of Human Genetics, 94(1), 120-128. https://doi.org/10.1016/j.ajhg.2013.11.020

Høyer, A.-S., Jørgensen, F., Lykke-Andersen, H., Møller, I.-L., Christiansen, A. V. & Piotrowski, J. A. (2013). Mapping and modelling of complex geological large-scale structures (”KOMPLEKS”). Abstract from The GEOCENTER Day, Copenhagen, Denmark.

Piotrowski, J. A., Tylmann, K., Narloch, W., Wysota, W., Damsgaard, A., Egholm, D. L., Larsen, N. K. & Lesemann, J. (2013). Subglacial mosaic of stable and deforming spots under the Scandinavian Ice Sheet: field, laboratory and numerical data. Abstract from CANQUA-CGRG, Edmonton, Canada.

Piotrowski, J. A., Hermanowski, P., Lesemann, J., Piechota, A. & Kristensen, T. (2013). Meltwater under the Scandinavian Ice Sheet: volumes, drainage mechanisms and consequences for ice sheet behavior. Abstract from Peribaltic Group (INQUA) International Symposium, Vilnius, Lithuania.

Tylmann, K., Wysota, W. & Piotrowski, J. A. (2013). Zastosowanie pomiarów anizotropii podatności magnetycznej (AMS) w badaniach glin subglacjalnych. Abstract from XX Conference “Stratigraphy of the Pleistocene in Poland", Lasocin, Poland.

Nielsen, D. U., Lescot, C., Gøgsig, T. M., Lindhardt, A. T. & Skrydstrup, T. (2013). Pd-Catalyzed Carbonylative α-Arylation of Aryl Bromides: Scope and Mechanistic Studies. Chemistry: A European Journal, 19(52), 17926-17938. https://doi.org/10.1002/chem.201303384

Geilfus, N.-X., Galley, R., Cooper, M., Halden, N., Hare, A., Wang, F., Søgaard, D. & Rysgaard, S. (2013). Gypsum crystals observed in experimental and natural sea ice. Geophysical Research Letters, 40(24), 6362–6367. https://doi.org/10.1002/2013GL058479, https://doi.org/10.1002/2013GL058479

Mammen, J., Kjeldgaard, M. & Kvorning, J. (2013). Vildledende og fordækt: Helmuth Nyborg. Begge punkter, han kritiseres for, udgør videnskabelig uredelighed, både ifølge UVVU's bekendtgørelse og de internationale protokoller, Danmark har tilsluttet sig. Weekendavisen, 10.

Nielsen, K. H. (2013). Bohr-atomet i populær indbinding. Kvant: Tidsskrift for Fysik og Astronomi, 24(December), 22-24.

Larsen, K. E. & Bendixen, C. (2013). Sus scrofa domesticus deleted in bladder cancer 1 mRNA, complete cds. GenBank Accession No. KF733442. Dataset

Odgaard, M. V., Moeslund, J. E., Dalgaard, T., Bøcher, P. K. & Svenning, J.-C. (2014). Human-driven topographic effects on the distribution of forest in a flat, lowland agricultural region. Journal of Geographical Sciences, 24(1), 76-92. https://doi.org/10.1007/s11442-014-1074-6

Nielsen, K. H. (2013). Da hippierne indtog kvantefysikken. Videnskab.dk. http://videnskab.dk/blog/da-hippierne-indtog-kvantefysikken

Stougaard, M. & Ho, Y.-P. (2014). DNA-based nanosensors for next-generation clinical diagnostics via detection of enzyme activity. Expert Review of Molecular Diagnostics, 14(1), 1-3. https://doi.org/10.1586/14737159.2014.863151

Turner, K. G., Bøcher, P. K., Kjeldsen, C., Svenning, J.-C. & Dalgaard, T. (2013). The socio-ecological scales of ecosystem service bundles in Denmark. In Proceedings from the 2nd International Conference: Science for the Environment (pp. 91). Aarhus University, DCE - Danish Centre for Environment and Energy.

Levi, P. S., Riis, T., Baisner, A. J., Peipoch, M. & Baattrup-Pedersen, A. (2013). Macrophyte biomass and heterogeneity influence nitrogen uptake in lowland streams. Abstract from Society for Freshwater Science, Jacksonville, United States.

Levi, P. S., Riis, T. & Baattrup-Pedersen, A. (2012). Macrophytes influence transient storage of managed lowland streams. Abstract from Society for Freshwater Science, Louisville, Kentucky, United States.

Wong, J. E. M. M., Alsarraf, H. M. A. B., Kaspersen, J. D., Pedersen, J. S., Stougaard, J., Thirup, S. S. & Blaise, M. (2014). Cooperative binding of LysM domains determines the carbohydrate affinity of a bacterial endopeptidase protein. FEBS journal, 281(4), 1196-1208. https://doi.org/10.1111/febs.12698

Schrøder, T. J., Christensen, S., Lindberg, S., Langgård, M., David, L., Maltas, P. J., Eskildsen, J., Jacobsen, J., Tagmose, L., Simonsen, K. B., Biilmann Rønn, L. C., de Jong, I. E. M., Malik, I. J., Karlsson, J.-J., Bundgaard, C., Egebjerg, J., Stavenhagen, J. B., Strandbygård, D., Thirup, S. S. ... Watson, S. P. (2014). The identification of AF38469: An orally bioavailable inhibitor of the VPS10P family sorting receptor Sortilin: An orally bioavailable inhibitor of the VPS10P family sorting receptor Sortilin. Bioorganic & Medicinal Chemistry Letters, 24(1), 177-180. https://doi.org/10.1016/j.bmcl.2013.11.046

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Anne Kirstine Mehlsen