Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Gonzalez-Bergonzoni, I., Kristensen, P. B., Baattrup-Pedersen, A., Astrup Kristensen, E. A., Alnøe, A. B. & Riis, T. (2018). Riparian forest modifies fuelling sources for stream food webs but not food-chain length in lowland streams of Denmark. Hydrobiologia, 805(1), 291-310. https://doi.org/10.1007/s10750-017-3313-1

Kejlberg-Rasmussen, C., Kopelowitz, T., Pettie, S. & Porat, E. (2014). Word-packing Algorithms for Dynamic Connectivity and Dynamic Sets. (1407.6755v1 ed.) arxiv.org. http://arxiv.org/abs/1407.6755v1

Elkin , M., Pettie, S. & Su, H.-H. (2015). (2Δ − 1)-edge-coloring is much easier than maximal matching in the distributed setting. In P. Indyk (Ed.), Proceedings of the Twenty-Sixth Annual ACM-SIAM Symposium on Discrete Algorithms, SODA '15 (pp. 355-370 ). Society for Industrial and Applied Mathematics. http://dl.acm.org/citation.cfm?id=2722155

Pettie, S. (2015). Sharp Bounds on Formation-free Sequences. In P. Indyk (Ed.), Proceedings of the Twenty-Sixth Annual ACM-SIAM Symposium on Discrete Algorithms, SODA '15 (pp. 592-604 ). Society for Industrial and Applied Mathematics. http://dl.acm.org/citation.cfm?id=2722155

Chung, K. M., Pettie, S. & Su, H. H. (2014). Distributed algorithms for the Lovász Local Lemma and graph coloring. In Proceedings of the Annual ACM Symposium on Principles of Distributed Computing (pp. 134-143). Association for Computing Machinery. https://doi.org/10.1145/2611462.2611465

Pettie, S. (2014). Sensitivity analysis of minimum spanning trees in sub-inverse-ackermann time. (arXiv:1407.1910v1 ed.) arxiv.org. http://arxiv.org/abs/1407.1910

Elkin , M. & Pettie, S. (2015). A linear-size logarithmic stretch path-reporting distance oracle for general graphs. In P. Indyk (Ed.), SODA '15 Proceedings of the Twenty-Sixth Annual ACM-SIAM Symposium on Discrete Algorithms (pp. 805-821 ). Society for Industrial and Applied Mathematics. http://dl.acm.org/citation.cfm?id=2722129.2722184&coll=DL&dl=ACM&CFID=630471957&CFTOKEN=95259129

Gilbert, S., Porat, E., King, V., Saia, J., Pettie, S. & Young, M. (2014). (Near) optimal resource-competitive broadcast with jamming. In G. Blelloch & P. Sanders (Eds.), Annual ACM Symposium on Parallelism in Algorithms and Architectures, SPAA '14 (pp. 257-266). Association for Computing Machinery. https://doi.org/10.1145/2612669.2612679

Jacobsen, A. R., Lauridsen, H., Fiirgaard, B., Boel, L. W. T. & Hansen, K. (2015). Healed or non-healed? computed tomography (CT) visualisation of morphology of bite trace ichnotaxa on a dinosaur bone. Societatis Geologorum Poloniae. Annales, 85, 457-464. http://www.asgp.pl/sites/default/files/volumes/85_3_457_464.pdf

Alonso, R. E., Errico, L., Taylor, M., Svane, A. & Christensen, N. E. (2015). Structural, electronic and hyperfine characterization of pure and Ta-doped ZrSiO₄. Physical Review B, 91, Article 085129. https://doi.org/10.1103/PhysRevB.91.085129

Skottfelt, J., Bramich, D. M., Hundertmark, M., Jørgensen, U. G., Michaelsen, N., Kjærgaard, P., Southworth, J., Sørensen, A. N., Andersen, M. F., Andersen, M. I., Christensen-Dalsgaard, J., Frandsen, S., Grundahl, F., Harpsøe, K. B. W., Kjeldsen, H. & Pallé, P. L. (2015). The two-colour EMCCD instrument for the Danish 1.54 m telescope and SONG. Astronomy & Astrophysics (A&A), 574, Article A54. https://doi.org/10.1051/0004-6361/201425260

Campante, T. L., Barclay, T., Swift, J. J., Huber, D., Adibekyan, V. Z., Cochran, W., Burke, C. J., Isaacson, H., Quintana, E. V., Davies, G. R., Aguirre, V. S., Ragozzine, D., Riddle, R., Baranec, C., Basu, S., Chaplin, W. J., Christensen-Dalsgaard, J., Metcalfe, T. S., Bedding, T. R. ... White, T. R. (2015). An ancient extrasolar system with five sub-earth-size planets. Astrophysical Journal, 799(2), Article 170. https://doi.org/10.1088/0004-637X/799/2/170

Bjerring, R., Johansson, L. S., Søndergaard, M., Lauridsen, T. L., Kjeldgaard, A., Sortkjær, L., Windolf, J. & Bøgestrand, J. (2015). Søer 2013: NOVANA. Aarhus University, DCE - Danish Centre for Environment and Energy. Videnskabelig rapport fra DCE - Nationalt Center for Miljø og Energi No. 122 http://dce2.au.dk/pub/SR122.pdf

Søndergaard, M. & Lauridsen, T. L. (2015). Anvendelsen af kvalitetselementer i ikke-interkalibrerede danske søtyper. Videnskabelig rapport fra DCE - Nationalt Center for Miljø og Energi No. 139 http://dce2.au.dk/pub/SR139.pdf

Boutrup, S., Holm, A. G., Bjerring, R., Johansson, L. S., Strand, J., Thorling, L., Brüsch, W., Erntsen, V., Ellermann, T. & Bossi, R. (2015). Miljøfremmede stoffer og metaller i vandmiljøet: NOVANA. Tilstand og udvikling 2004-2012. Aarhus University, DCE - Danish Centre for Environment and Energy. Videnskabelig rapport fra DCE - Nationalt Center for Miljø og Energi No. 142 http://dce2.au.dk/pub/SR142.pdf

Jessen, C. A., Pedersen, K. B., Christensen, C., Olsen, J., Mortensen, M. F. & Hansen, K. M. (2015). Early Maglemosian culture in the Preboreal landscape: Archaeology and vegetation from the earliest Mesolithic site in Denmark at Lundby Mose, Sjælland. Quaternary International, 378, 73-87. https://doi.org/10.1016/j.quaint.2014.03.056

Weegman, M., Fox, A. D., Bearhop, S., Hilton, G., Walsh, A. J., Cleasby, I. R. & Hodgson, D. J. (2015). No evidence for sex bias in winter inter-site movements in an Arctic nesting goose population. Ibis, 157(2), 401-405. https://doi.org/10.1111/ibi.12246

Pen, A. E., Nyegaard, M., Fang, M., Jiang, H., Christensen, R., Mølgaard, H., Andersen, H., Ulhøi, B. P., Østergaard, J. R., Væth, S., Sommerlund, M., de Brouwer, A. P. M., Zhang, X. & Jensen, U. B. (2015). A novel single nucleotide splice site mutation in FHL1 confirms an Emery-Dreifuss plus phenotype with pulmonary artery hypoplasia and facial dysmorphology. European Journal of Medical Genetics, 58(4), 222-229. https://doi.org/10.1016/j.ejmg.2015.02.003

Monika, K., Saag, L., Vicente, M., A. Wilson Sayres, M., Järve, M., Talas, U. G., Rootsi, S., Ilumäe, A.-M., Mägi, R., Pagani, L., Puurand, T., Faltyskova, Z., Clemente, F., Cardona, A., Metspalu, E., Sahakyan, H., Yunusbayev, B., Hudjashov, G., DeGiorgio, M. ... Kivisild, T. (2015). A recent bottleneck of Y chromosome diversity coincides with a global change in culture. Genome Research, 25, 459-466. https://doi.org/10.1101/gr.186684.114

Vorkamp, K., Riget, F. F. & Dietz, R. (2015). Toxaphene in the aquatic environment of Greenland. Environmental Pollution, 200, 140-148. https://doi.org/10.1016/j.envpol.2015.02.014

Høgslund, S., Risgaard-Petersen, N. & Cedhagen, T. (2015). Nitrate metabolism in the gromiid microbial universe. Abstract from 2015 Aquatic Sciences Meeting, Granada, Spain.

Kozlova, N., Jensen, J. K., Chi, T. F., Samoylenko, A. & Kietzmann, T. (2015). PAI-1 modulates cell migration in a LRP1-dependent manner via β-catenin and ERK1/2. Thrombosis and Haemostasis, 113(5), 988-998. https://doi.org/10.1160/TH14-08-0678

Rao, W., Ning, J., Zhong, P., Jeppesen, E. & Liu, Z. (2015). Size-dependent feeding of omnivorous Nile tilapia in a macrophyte-dominated lake: implications for lake management. Hydrobiologia, 749(1), 125-134. https://doi.org/10.1007/s10750-014-2155-3

Bækhøj, J. E. (2015). Nuclear-Motion Effects in ATAS. Poster session presented at Nanocontrol Network: Toward Energy-efficient Electronics with Ultrafast Control of Novel Nanomaterials, Aarhus, Denmark.

Svensmark, J. S. S. (2015). Effects of nuclear motion in tunneling ionization. Poster session presented at Nanocontrol Network: Toward Energy-efficient Electronics with Ultrafast Control of Novel Nanomaterials, Aarhus, Denmark.

Hansen, J. P. (2015). Riemann-Roch Spaces and Linear Network Codes. (http://arxiv.org/abs/1503.02386 ed.) arxiv.org. http://arxiv.org/abs/1503.02386

Westberg, M., Holmegaard, L., Pimenta, F. M., Etzerodt, M. & Ogilby, P. R. (2015). Rational design of an efficient, genetically encodable, protein-encased singlet oxygen photosensitizer. Journal of the American Chemical Society, 137(4), 1632-42. https://doi.org/10.1021/ja511940j

Selnihhin, D. & Andersen, E. S. (2015). Computer-aided design of DNA origami structures. In M. A. Marchisio (Ed.), Computational Methods in Synthetic Biology (pp. 23-44). Humana Press.

Kajhøj, T. Q., Duch, M. R., Pedersen, F. S., Lovschall, H. & Füchtbauer, E.-M. (2015). Test of critical steps towards a combined cell and gene therapy approach for the treatment of Duchenne muscular dystrophy. Journal of Molecular and Genetic Medicine, 9(1), 1-5. Article 1000160. https://doi.org/10.4172/1747-0862.1000160

Murray, C., Stedmon, C. A. & Markager, S. (2015). Predicting Spectral and PAR Light Attenuation in Greenlandic Coastal Waters. Abstract from ASLO Aquatic Sciences Meeting, Granada, Spain.

Andersen, J., Borja, A., Berg, T., Carstensen, J., Cochrane, S., Murray, C. & Uyarra, M. C. (2015). Development of an indicator-based Tool for assessment of marine biodiversity status. Abstract from ASLO Aquatic Sciences Meeting, Granada, Spain.

Nass, K., Foucar, L., Barends, T. R. M., Hartmann, E., Botha, S., Shoeman, R. L., Doak, R. B., Alonso-Mori, R., Aquila, A., Bajt, S., Barty, A., Bean, R., Beyerlein, K. R., Bublitz, M., Drachmann, N., Gregersen, J., Jönsson, H. O., Kabsch, W., Kassemeyer, S. ... Schlichting, I. (2015). Indications of radiation damage in ferredoxin microcrystals using high-intensity X-FEL beams. Journal of Synchrotron Radiation, 22(2), 225-238. https://doi.org/10.1107/S1600577515002349

Gorgel, M., Bøggild, A., Ulstrup, J., Weiss, M. S., Müller, U., Nissen, P. & Boesen, T. (2015). Against the odds? De novo structure determination of a pilin with two cysteine residues by sulfur SAD. Acta crystallographica Section D: Structural biology , 71(5), 1095-1101. https://doi.org/10.1107/S1399004715003272

Zinner, N. T. & Nygaard, N. G. (2015). Efimov states in Li-Cs mixtures within a minimal model. Few-Body Systems, 56(2-3), 125-131. https://doi.org/10.1007/s00601-015-0959-y

Hansen, J., Ek, M., Roslin, T., Moreau, J., Teixeira, M., Gilg, O. & Schmidt, N. M. (2015). First Observation of a Four-egg Clutch of Long-tailed Jaeger (Stercorarius longicaudus). Wilson Journal of Ornithology, 127(1), 5-8. https://doi.org/10.1676/14-072.1

Hjorth, J., Vreeswijk, P. M., Gall, C. & Watson, D. (2013). On inferring extinction laws in z ∼ 6 quasars as signatures of supernova dust. Astrophysical Journal, 768(2), Article 173. https://doi.org/10.1088/0004-637X/768/2/173

Temim, T., Dwek, E., Tchernyshyov, K., Boyer, M. L., Meixner, M., Gall, C. & Roman-Duval, J. (2015). Dust destruction rates and lifetimes in the magellanic clouds. Astrophysical Journal, 799(2), Article 158. https://doi.org/10.1088/0004-637X/799/2/158

Tan, D., Weber, S. J., Siddiqi, I., Mølmer, K. & Murch, K. W. (2015). Prediction and retrodiction for a continuously monitored superconducting qubit. Physical Review Letters, 114, Article 090403. https://doi.org/10.1103/PhysRevLett.114.090403

Wolf, G., Yang, P., Füchtbauer, A. C., Füchtbauer, E.-M., Silva, A. M., Park, C., Wu, W., Nielsen, A. L., Pedersen, F. S. & Macfarlan, T. S. (2015). The KRAB zinc finger protein ZFP809 is required to initiate epigenetic silencing of endogenous retroviruses. Genes & Development, 29(5), 538-54. https://doi.org/10.1101/gad.252767.114

Esmann, M., Fedosova, N. U. & Olesen, C. (2015). Na,K-ATPase structure/function relationships probed by the denaturant urea. B B A - Biomembranes, 1848(5), 1212-1223. https://doi.org/10.1016/j.bbamem.2015.02.006

Schaetz, F. & Arias Abad, C. (2015). Higher holonomies: comparing two constructions. Differential Geometry and Its Applications, 40, 14-42. https://doi.org/10.1016/j.difgeo.2015.02.003

Jiang, H., Muscheler, R., Björck, S., Seidenkrantz, M.-S., Olsen, J., Sha, L., Sjolte, J., Eiríksson, J., Ran, L., Knudsen, K. L. & Knudsen, M. F. (2015). Solar forcing of Holocene summer sea-surface temperatures in the northern North Atlantic. Geology, 43(3), 203-206. https://doi.org/10.1130/G36377.1

Holm, C., Junghanns, A., Overgaard, J., Uhl, G. & Bilde, T. (2014). How to trigger your motherly instinct? Investigating the evolution of social behaviour during maternal care from a physiological and behavioural point of view. Abstract from European Congress of Arachnology, Torino, Italy. http://www.european-arachnology.org/collo/images/28abstracts.pdf

Olesen, J. M. (2015). Det globaliserede dyreliv. Weekendavisen.

Hansen, M. C., Nyvold, C. G., Roug, A. S., Kjeldsen, E., Villesen, P., Nederby, L. & Hokland, P. (2015). Nature and nurture: a case of transcending haematological pre-malignancies in a pair of monozygotic twins adding possible clues on the pathogenesis of B-cell proliferations. British Journal of Haematology, 169(3), 391–400. https://doi.org/10.1111/bjh.13305

Jiang, L., Zhao, B., Xu, P., Sørensen, H. P., Jensen, J. K., Christensen, A., Hosseini, M., Nielsen, N. C., Jensen, K. J., Andreasen, P. A. & Huang, M. (2015). Distinctive binding modes and inhibitory mechanisms of two peptidic inhibitors of urokinase-type plasminogen activator with isomeric P1 residues. International Journal of Biochemistry & Cell Biology, 62, 88-92. https://doi.org/10.1016/j.biocel.2015.02.016

Høyer, A. S., Jørgensen, F. V., Foged, N., He, X. & Christiansen, A. V. (2015). Three-dimensional geological modelling of AEM resistivity data - A comparison of three methods. Journal of Applied Geophysics, 115, 65-78. https://doi.org/10.1016/j.jappgeo.2015.02.005

Hubacek, P. & Wichs, D. (2015). On the Communication Complexity of Secure Function Evaluation with Long Output. In T. Roughgarden (Ed.), Proceedings of the 2015 Conference on Innovations in Theoretical Computer Science, ITCS '15 (pp. 163-172 ). Association for Computing Machinery. https://doi.org/10.1145/2688073.2688105

Loft, N. J., Salami Dehkharghani, A., Mehta, N. P., Volosniev, A. G. & Zinner, N. T. (2015). A variational approach to repulsively interacting three-fermion systems in a one-dimensional harmonic trap. The European Physical Journal D: Atomic, Molecular, Optical and Plasma Physics, 69(3), Article 65. https://doi.org/10.1140/epjd/e2015-50845-9

Jeppesen, E. (2015). Brazilian limnologists: “tear down this wall”. Boletim ABLimno, 41, 30-31.

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