Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Winckelmann, A. A., Munk-Petersen, L. V., Rasmussen, T. A., Melchjorsen, J., Hjelholt, T. J., Montefiori, D., Ostergaard, L., Søgaard, O. S. & Tolstrup, M. (2013). Administration of a Toll-Like Receptor 9 Agonist Decreases the Proviral Reservoir in Virologically Suppressed HIV-Infected Patients. P L o S One, 8(4), e62074. https://doi.org/10.1371/journal.pone.0062074

Farajzadeh, L., Hornshøj, H., Momeni, J., Thomsen, B., Larsen, K. E., Hedegaard, J., Bendixen, C. & Madsen, L. B. (2013). Pairwise comparisons of ten porcine tissues identify differential transcriptional regulation at the gene, isoform, promoter and transcription start site level. Biochemical and Biophysical Research Communications, 438(2), 346-352. https://doi.org/10.1016/j.bbrc.2013.07.074

Hedegaard, C., Kjaer-Sorensen, K., Madsen, L. B., Henriksen, C., Momeni, J., Bendixen, C., Oxvig, C. & Larsen, K. E. (2013). Porcine synapsin 1: SYN1 gene analysis and functional characterization of the promoter. F E B S Open Bio, 3, 411–420. https://doi.org/10.1016/j.fob.2013.10.002

Poulsen, N. A., Bertelsen, H. P., Jensen, H. B., Gustavsson, F., Glantz, M., Månsson, H. L., Andrén, A., Paulsson, M., Bendixen, C., Buitenhuis, A. J. & Larsen, L. B. (2013). The occurrence of noncoagulating milk and the association of bovine milk coagulation properties with genetic variants of the caseins in 3 Scandinavian dairy breeds. Journal of Dairy Science, 96(8), 4830-4842. https://doi.org/10.3168/jds.2012-6422

Urazimbetova, S. & Kyng, M. (2012). Bridging the Patient Empowerment Gap of National Healthcare Services with Quick Response Code. Global Telemedicine and eHealth Updates : Knowledge Resources, 5, 444-448. http://www.medetel.lu/download/2012/Med-e-Tel_2012_Global_Telemedicine_and_eHealth_Updates_Volume_5_Contents.pdf

Jensen, C. S., Prasad, M. R. & Møller, A. (2013). Automated Testing with Targeted Event Sequence Generation. In M. Pezzè & M. Harman (Eds.), International Symposium on Software Testing and Analysis (ISSTA), 2013: Proceedings (pp. 67-77). Association for Computing Machinery. https://doi.org/10.1145/2483760.2483777

Evans, A. C., Meinert, C., Bredehoft, J. H., Giri, C., Jones, N. C., Hoffmann, S. V. & Meierhenrich, U. J. (2013). Anisotropy Spectra for Enantiomeric Differentiation of Biomolecular Building Blocks. In V. Schurig (Ed.), Differentiation of Enantiomers II (Vol. 341, pp. 271-300). Springer. https://doi.org/10.1007/128_2013_442

Sonne, C., Leifsson, P. S. & Dietz, R. (2013). Liver and renal lesions in mercury-contaminated narwhals (Monodon monoceros) from North West Greenland. Toxicological and Environmental Chemistry, 95(3), 515–528. https://doi.org/10.1080/02772248.2013.783666

Greaves, A. K., Letcher, R. J., Sonne, C. & Dietz, R. (2013). Brain region distribution and patterns of bioaccumulative perfluoroalkyl carboxylates and sulfonates in east greenland polar bears (Ursus maritimus). Environmental Toxicology and Chemistry, 32(3), 713-722. https://doi.org/10.1002/etc.2107

Andersen, K., Brock, S., Esberg, J., Thomsen, H. D. & Uggerhøj, U. I. (2013). Radiation emission as a virtually exact realization of Heisenbergs microscope. Nuclear Instruments and Methods in Physics Research Section B: Beam Interactions with Materials and Atoms, 315, 278-282. https://doi.org/10.1016/j.nimb.2013.03.041

Barndorff-Nielsen, O. E., Pakkanen, M. & Schmiegel, J. (2013). Assessing Relative Volatility/Intermittency/Energy Dissipation. Institut for Økonomi, Aarhus Universitet. CREATES Research Paper No. 2013-15

Mikkelsen, L., Mouritsen, K. N., Dahl, K., Teilmann, J. & Tougaard, J. (2013). Re-established stony reef attracts harbour porpoises Phocoena phocoena. Marine Ecology Progress Series, 481, 239-248. https://doi.org/10.3354/meps10260

Lassen, L. B., Füchtbauer, A., Schmitz, A., Sørensen, A. B., Pedersen, F. S. & Füchtbauer, E.-M. (2013). Septin9 is involved in T-cell development and CD8(+) T-cell homeostasis. Cell and Tissue Research, 352(3), 695-705. https://doi.org/10.1007/s00441-013-1618-6

Dalgaard, L. G., Grönvall, E. & Verdezoto, N. (2013). MediFrame: A Tablet Application to Plan, Inform, Remind and Sustain Older Adults Medication Intake. In IEEE International Conference on Healthcare Informatics, IEEE ICHI 2013 (pp. 36-45). IEEE. https://doi.org/10.1109/ICHI.2013.12

Bødker, S. & Grönvall, E. (2013). Calendars: Time coordination and overview in families and beyond. In O. W. Bertelsen, L. Ciolfi, M. A. Grasso & G. A. Papadopoulos (Eds.), ECSCW 2013 : Proceedings of the 13th European Conference on Computer Supported Cooperative Work, 2013 (pp. 63-81). Springer VS. https://doi.org/10.1007/978-1-4471-5346-7_4

Palmer, M. H., Hoffmann, S. V., Jones, N. C., Smith, E. R. & Lichtenberger, D. L. (2013). The electronic states of pyridine-N-oxide studied by VUV photoabsorption and ab initio configuration interaction computations. Journal of Chemical Physics, 138, Article 214317. https://doi.org/10.1063/1.4807841

Cheong, L.-Z., Widzisz, K. M., Wang, Y., Jensen, H. H., Theil, P. K., Guo, Z. & Xu, X. (2013). Chemo-enzymatic Synthesis of Novel b-Hydroxy-b-methylbutryric Acid (HMB)–Medium Chain Triacylglycerol (MCT) Complexes. Journal of the American Oil Chemists' Society, 90(6), 919-922. https://doi.org/10.1007/s11746-013-2220-5

Anderson, J. W., Novák, A., Sükösd, Z., Golden, M., Arunapuram, P., Edvardsson, I. & Hein, J. (2013). Quantifying variances in comparative RNA secondary structure prediction. B M C Bioinformatics, 14, Article 149. https://doi.org/10.1186/1471-2105-14-149

Schou, U. K., Peters, C. D., Wan Kim, S., Frøkiær, J. & Nielsen, S. (2007). Characterization of a rat model of right-sided heart failure induced by pulmonary trunk banding. Journal of Experimental Animal Science, 43(4), 237-254. https://doi.org/10.1016/j.jeas.2006.10.004

Damsgaard, C., Fago, A., Hagner-Holler, S., Malte, H., Burmester, T. & Weber, R. E. (2013). Molecular and Functional Characterisation of Hemocyanin of the Giant African Millipede Archispirostreptus gigas. Journal of Experimental Biology, 216, 1616-1623. https://doi.org/10.1242/jeb.080861

Leite, C. A. C., Taylor , E. W., Wang, T., Abe, A. S. & de Andrade, D. O. V. (2013). Ablation of the Ability to Control the right-to-left cardiac Shunt does not Affect Oxygen Uptake Specific Dynamic Action or Growth in the Rattlesnake Crotalus durissus. Journal of Experimental Biology, 216, 1881-1889. https://doi.org/10.1242/jeb.083840

Oliveira, C., Wahlberg, M., Johnson, M., J. O. Miller, P. & Madsen, P. P. T. (2013). The function of male sperm whale slow clicks in a high latitude habitat: Communication, echolocation, or prey debriliation? Acoustical Society of America. Journal, 135(5), 3135-3144. https://doi.org/10.1121/1.4795798

Andersen, C. K. & Mølmer, K. (2013). Effective description of tunneling in a time-dependent potential with applications to voltage switching in Josephson junctions. Physical Review A, 87(5), 052119. https://doi.org/10.1103/PhysRevA.87.052119

Song, J., Zhang, Z., Zhang, S., Liu, L., Li, Q., Xie, E., Gothelf, K. V., Besenbacher, F. & Dong, M. (2013). Isothermal Hybridization Kinetics of DNA Assembly of Two-Dimensional DNA Origami. Small, 9(17). https://doi.org/10.1002/smll.201202861

Zhang, Y., Wang, W., Chen, J., Zhang, K., Gao, F., Gao, B., Zhang, S., Dong, M., Besenbacher, F., Gong, W., Zhang, M., Sun, F. & Feng, W. (2013). Structural Insights into the Intrinsic Self-Assembly of Par-3 N-Terminal Domain. Structure, 21(6), 997-1006. https://doi.org/10.1016/j.str.2013.04.004

Ciliberto, S., Imparato, A., Naert, A. & Tanase, M. (2013). Heat Flux and Entropy Produced by Thermal Fluctuations. Physical Review Letters, 110(18), 180601. https://doi.org/10.1103/PhysRevLett.110.180601

Chernyy, S., Jensen, B. E. B., Shimizu, K., Ceccato, M., Pedersen, S. U., Zelikin, A. N., Daasbjerg, K. & Iruthayaraj, J. (2013). Surface Grafted Glycopolymer Brushes to Enhance Selective Adhesion of HepG2 Cells. Journal of Colloid and Interface Science, 404, 207–214. https://doi.org/10.1016/j.jcis.2013.04.025

Jensen, B., Wang, T., Christoffels, V. M. & Moorman, A. F. M. (2013). Evolution and Development of the building plan of the vertebrate heart. B B A - Molecular Cell Research, 1833(4), 783-794. https://doi.org/10.1016/j.bbamcr.2012.10.004

Lloyd, K., Schreiber, L., Petersen, D. G., Kjeldsen, K. U., Lever, M. A., Steen, A. D., Stepanauskas, R., Richter, M., Kleindienst, S., Lenk, S., Schramm, A. & Jorgensen, B. B. (2013). Predominant archaea in marine sediments degrade detrital proteins. Nature, 496(7444), 215-218. https://doi.org/10.1038/nature12033

Gammelmark, S. (2013). Efficient Bayesian Parameter Estimation from Continuously Monitered Quantum Systems.

Wædegaard, K. J., Frislev, M. T. & Balling, P. (2013). Femtosecond laser excitation of dielectric materials: experiments and modeling of optical properties and ablation depths. Applied Physics A: Materials Science & Processing, 110(3), 601-605. https://doi.org/10.1007/s00339-012-7136-7

Wædegaard, K. J., Hansen, H. D. & Balling, P. (2013). Optimizing the efficiency of femtosecond-laser-written holograms. Applied Physics B, 113(3), 345-349. https://doi.org/10.1007/s00340-013-5496-0

Kragh, H. (2013). Ørsted, naturvidenskaben og den danske guldalder. In K. Lykke Grand (Ed.), Guld: Skatte fra den Danske Guldalder (pp. 150-165). Systime Academic.

Grönvall, E. & Verdezoto, N. (2013). Understanding Challenges and Opportunities of Preventive Blood Pressure Self-Monitoring at Home. In P. Palanque , F. Détienne & A. Tricot (Eds.), Proceedings of the 31st European Conference on Cognitive Ergonomics (ACM ECCE 2013) Association for Computing Machinery. https://doi.org/10.1145/2501907.2501962

Rasmussen, C. (2013). Ny scanner afslører undergrundens hemmeligheder. Laboranten, 57(6), 12-13. http://www.e-pages.dk/hk/1257/2

Kaul, M., Yang, B. & Jensen, C. S. (2013). Building Accurate 3D Spatial Networks to Enable Next Generation Intelligent Transportation Systems. In IEEE 14th International Conference on Mobile Data Management (MDM), 2013 (Volume:1 ) (pp. 137 - 146 ). IEEE. https://doi.org/10.1109/MDM.2013.24

Andersen, O., Jensen, C. S., Torp, K. & Yang, B. (2013). EcoTour: Reducing the Environmental Footprint of Vehicles Using Eco-Routes. In IEEE 14th International Conference on Mobile Data Management (MDM), 2013 (Volume:1) (pp. 338 - 340 ). IEEE. https://doi.org/10.1109/MDM.2013.50

Balakrishnan, V. S., Vad, B. S. & Otzen, D. (2013). Novicidin's membrane permeabilizing activity is driven by membrane partitioning but not by helicity: A biophysical study of the impact of lipid charge and cholesterol. BBA General Subjects, 1834(6), 996-1002. https://doi.org/10.1016/j.bbapap.2013.03.025

Pigolotti, S., Lizana, L., Otzen, D. & Sneppen, K. (2013). Quality control system response to stochastic growth of amyloid fibrils. FEBS Letters, 587(9), 1405-1410. https://doi.org/10.1016/j.febslet.2013.03.018

Dueholm, M. S., Søndergaard, M., Nilsson, M., Christiansen, G., Stensballe, A., Overgaard, M. T., Givskov, M. C., Tolker-Nielsen, T., Otzen, D. & Nielsen, P. H. (2013). Expression of Fap amyloids in Pseudomonas aeruginosa, P. fluorescens, and P. putida results in aggregation and increased biofilm formation. MicrobiologyOpen, 2(3), 365-382. https://doi.org/10.1002/mbo3.81

Arndt, S., Jørgensen, B. B., LaRowe, D. E., Middelburg, J. J., Pancost, R. D. & Regnier, P. (2013). Quantifying the degradation of organic matter in marine sediments: A review and synthesis. Earth-Science Reviews, 123, 53-86. https://doi.org/10.1016/j.earscirev.2013.02.008

Søndergaard, M., Bøjesen, E. D., Borup, K. A., Christensen, S., Christensen, M. & Iversen, B. B. (2013). Sintering and annealing effects on ZnO microstructure and thermoelectric properties. Acta Materialia, 61(9), 3314-3323. https://doi.org/10.1016/j.actamat.2013.02.021

Gorczyca, I., Suski, T., Staszczak, G., Christensen, N. E., Svane, A., Wang, X., Dimakis, E. & Moustakas, T. (2013). InN/GaN Superlattices: Band Structures and Their Pressure Dependence. Japanese Journal of Applied Physics, 52(8), 08JL06. https://doi.org/10.7567/JJAP.52.08JL06

Hayashi, Y., Miclaus, T., Scavenius, C., Engelmann, P., Autrup, H., Enghild, J. J., Sutherland, D. S. & Scott-Fordsmand, J. J. (2013). Nanoparticle-protein corona in invertebrate in vitro testing.

Lenoir, J., Graae, B. J., Aarrestad, P. A., Alsos, I. G., Armbruster, W. S., Austrheim, G., Bergendorff, C., Birks, H. J. B., Bråthen, K. A., Brunet, J., Bruun, H. H., Dahlberg, C. J., Decocq, G., Diekmann, M., Dynesius, M., Ejrnaes, R., Grytnes, J.-A., Hylander, K., Klanderud, K. ... Svenning, J.-C. (2013). Local temperatures inferred from plant communities suggest strong spatial buffering of climate warming across Northern Europe. Global Change Biology, 19(5), 1470-1481. https://doi.org/10.1111/gcb.12129

Malmendal, A., Sørensen, J. G., Overgaard, J., Holmstrup, M., Nielsen, N. C. & Loeschcke, V. (2013). Metabolomic analysis of the selection response of Drosophila melanogaster to environmental stress: are there links to gene expression and phenotypic traits? Naturwissenschaften, 100, 417–427.

Waagner, D., Holmstrup, M., Bayley, M. & Sørensen, J. G. (2013). Induced cold-tolerance mechanisms depend on duration of acclimation in the chillsensitive Folsomia candida (Collembola). Journal of Experimental Biology, 216, 1991-2000.

Kahveci, D., Guo, Z., Cheong, L.-Z., Falkeborg, M., Panpipat, W. & Xu, X. (2013). Oxidative stability of enzymatically processed oils and fats. In A. Logan, U. Nienaber & X. Pan (Eds.), Lipid oxidation: Challenges in food systems (pp. 211-242). AOCS press, Urbana IL. http://www.aocs.org/Store/ProductDetail.cfm?ItemNumber=18702

Zhai, X., Piwpuan, N., Arias, C. A., Headley, T. & Brix, H. (2013). Can root exudates from emergent wetland plants fuel denitrification in subsurface flow constructed wetland systems? Ecological Engineering, 61, 555-563. https://doi.org/10.1016/j.ecoleng.2013.02.014, https://doi.org/10.1016/j.ecoleng.2013.02.014

Nivala, J., Brix, H., Bernhard, K., van Afferden, M., Müller, R. A., Headley, T. & Wallace, S. (2013). Comparative analysis of constructed wetlands: The design and construction of the ecotechnology research facility in Langenreichenbach, Germany. Ecological Engineering, 61, 527–543. https://doi.org/10.1016/j.ecoleng.2013.01.035

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