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Department of Biology

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The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Arias, L. N., Sambucetti, P., Scannapieco, A. C., Loeschcke, V. & Norry, F. (2012). Survival of heat stress with and without heat hardening inDrosophila melanogaster: Interactions with larval density. Journal of Experimental Biology, 215, 2220-2225. https://doi.org/10.1242/jeb.069831

Jepsen, M., Beerens, N., Krüger, A. C., Kjems, J. & Birkedal, V. (2012). tRNA Annealing onto the HIV-1 Genome Studied by FRET Spectroscopy and Microscopy. Biophysical Journal, 102(3, Supplement 1), 278a . https://doi.org/10.1016/j.bpj.2011.11.1533

Tesauro, C., Juul, S., Arno, B., Nielsen, C. J. F., Fiorani, P., Frøhlich, R. F., Andersen, F. F., Desideri, A., Stougaard, M., Petersen, E. & Knudsen, B. R. (2012). Specific detection of topoisomerase i from the malaria causing P. falciparum parasite using isothermal Rolling Circle Amplification. Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), 2012, 2416-2419. https://doi.org/10.1109/EMBC.2012.6346451

Kjems, J. & Howard, K. (2012). Oligonucleotide delivery to the lung: waiting to inhale. Molecular Therapy - Nucleic Acids, 1, e1. https://doi.org/10.1038/mtna.2011.1

Chen, M., Le, D. Q. S., Hein, S., Li, P., Nygaard, J. V., Kassem, M., Kjems, J., Besenbacher, F. & Bünger, C. (2012). Fabrication and characterization of a rapid prototyped tissue engineering scaffold with embedded multicomponent matrix for controlled drug release. International Journal of Nanomedicine (Online), (7), 4285-97. https://doi.org/10.2147/IJN.S33083

Bringmann, K. & Larsen, K. G. (2013). Succinct Sampling from Discrete Distributions. In Proceedings of the 45th annual ACM Symposium on Theory of Computing, STOC '13 (pp. 775-782 ). Association for Computing Machinery. https://doi.org/10.1145/2488608.2488707

Bramsen, J. B. & Kjems, J. (2012). Development of Therapeutic-Grade Small Interfering RNAs by Chemical Engineering. Frontiers in Genetics, 3, 154. https://doi.org/10.3389/fgene.2012.00154

Rasch, M., Forchhammer, M. C., Rysgaard, S., Tamstorf, M. P. & Schmidt, N. M. (2012). Greenland Ecosystem Monitoring: Monitoring of Climate Change effects and feedbacks in Greenland ecosystems.

Liu, Y., Wang, S., Yin, Y., Jin, H., Zhao, S., Li, M., Wang, P., Geng, X. & Xu, F. (2012). Use of a culture independent method to analyze the diversity of soil fungi surrounding Chroogomphus rutilus in the Beijing region of China. Annals of Microbiology, 62(4), 1743-1749. https://doi.org/10.1007/s13213-012-0431-x

Garcia-Fernandez, M. (2013). TORSION-FREE GENERALIZED CONNECTIONS AND HETEROTIC SUPERGRAVITY.

Jónsdóttir, K. Ý., Rønn-Nielsen, A., Mouridsen, K. & Jensen, E. B. V. (2013). Lévy-based modelling in brain imaging. Scandinavian Journal of Statistics, 40(3), 511-529. https://doi.org/10.1002/sjos.12000

Rasmusson, A., Hahn, U., Larsen, J. O., Gundersen, H. J. G., Jensen, E. B. V. & Nyengaard, J. R. (2013). The spatial rotator. Journal of Microscopy, 250(2), 88-100. https://doi.org/10.1111/jmi.12022

Albrecher, H., Asmussen, S. & Kortschak, D. (2012). Tail asymptotics for dependent subexponential differences. Siberian Mathematical Journal, 53(6), 965-983. https://doi.org/10.1134/S003744661206002X

Anderson, J. W. J., Haas, P. A., Mathieson, L.-A., Volynkin, V., Lyngsø, R., Tataru, P. & Hein, J. (2013). Oxfold: Kinetic Folding of RNA using Stochastic Context-Free Grammars and Evolutionary Information. Bioinformatics, 29(6), 704-710. https://doi.org/10.1093/bioinformatics/btt050

Papadimitriou, S., Kennedy, H., Kennedy, P. & Thomas, D. (2013). Ikaite solubility in seawater-derived brines at 1 atm and sub-zero temperatures to 265 K. Geochimica et Cosmochimica Acta, 109, 241-253. https://doi.org/10.1016/j.gca.2013.01.044

Bjerre, D., Madsen, L. B., Mark, T., Cirera, S., Larsen, K., Jørgensen, C. B. & Fredholm, M. (2013). Potential Role of the Porcine Superoxide Dismutase 1 (SOD1) Gene in Pig Reproduction. Animal Biotechnology, 24(1), 1-9. https://doi.org/10.1080/10495398.2012.723083

Christian Johannsen, J., Ulstrup, S., Bianchi, M., Hatch, R., Guan, D., Mazzola, F., Hornekær, L., Fromm, F., Raidel, C., Seyller, T. & Hofmann, P. (2013). Electron-phonon coupling in quasi free-standing graphene. Journal of Physics: Condensed Matter, 25, 094001. https://doi.org/10.1088/0953-8984/25/9/094001

Kjærsgaard, A., Le, N., Demontis, D., Novicic, Z. K., Loeschcke, V. & Pertoldi, C. (2012). The effect of developmental temperature fluctuation on wing traits and stressed locomotor performance in Drosophila melanogaster, and its dependence on heterozygosity. Evolutionary Ecology Research, 14(7), 803-819.

Sliwinska, K. & Heilmann-Clausen, C. (2012). The Svalbardella cooksoniae interval marking the Oi1 a cooling event on the Northern Hemisphere. Abstract from International Conference on Modern and Fossil Dinoflagellates, Liverpool, United Kingdom.

Fournais, S. & Kachmar, A. (2012). The Ground State Energy of the Three Dimensional Ginzburg-Landau Functional. Part I: Bulk Regime. Communications in Partial Differential Equations, 38(2), 339-383. https://doi.org/10.1080/03605302.2012.717156

Paredi, G., Raboni, S., Bendixen, E., de Almeida, A. M. & Mozzarelli, A. (2012). “Muscle to meat” molecular events and technological transformations: The proteomics insight. Journal of Proteomics, 75(14), 4275 – 4289. https://doi.org/10.1016/j.jprot.2012.04.011

Bergfjord, C., Mannering, U., Frei, K. M., Gleba, M., Scharff, A. B., Skals, I., Heinemeier, J., Nosch, M.-L. & Holst, B. (2012). Nettle as a distinct Bronze Age textile plant. Scientific Reports, 2. https://doi.org/10.1038/srep00664

de Almeida, A. M. & Bendixen, E. (2012). Pig proteomics: A review of a species in the crossroad between biomedical and food sciences. Journal of Proteomics, 75(14), 4296–4314. https://doi.org/10.1016/j.jprot.2012.04.010

Helyar , S. J., Limborg, M., Bekkevold, D., Babbucci, M., van Houdt, J., Maes , G. E., Bargelloni , L., Nielsen, R. O., Taylor, M. I., Ogden , R., Cariani , A., Carvalho, G. R., Consortium , F. & Panitz, F. (2012). SNP Discovery Using Next Generation Transcriptomic Sequencing in Atlantic Herring (Clupea harengus). PLoS One, 7(8), e42089. https://doi.org/10.1371/journal.pone.0042089

Wang, Y., Xia, L., Xu, X., Xie, L. & Duan, Z. (2012). Lipase-catalyzed acidolysis of canola oil with caprylic acid to produce medium-, long- and medium-chain-type structured lipids. Food and Bioproducts Processing, 90(4), 707-712. https://doi.org/10.1016/j.fbp.2012.02.003

Mikkelsen, G. L., Keller, M. & Rupp, A. (2012). Efficient Threshold Zero-Knowledge with Applications to User-Centric Protocols. Lecture Notes in Computer Science, 7412, 147-166 . https://doi.org/10.1007/978-3-642-32284-6_9

Chen, S., Verbin, E. & Yu, W. (2012). Data Structure Lower Bounds on Random Access to Grammar-Compressed Strings. http://arxiv.org/abs/1203.1080

Gregersen, N., Buttenschøn, H. N., Hedemand, A., Dahl, H. A., Kristensen, A. S., Joensen, S., Woldbye, D. P. D., Kofoed, P., Erhardt, A., Kruse, T. A., Wang, A. G., Børglum, A. & Mors, O. (2012). Are TMEM genes potential candidate genes for panic disorder?. Poster session presented at XX World Congress of Psychiatric Genetics, Hamburg, Germany.

Terberger, T., Gramsch, B. & Heinemeier, J. (2012). The underestimated fish? - Early Mesolithic human remains from Northern Germany. In M. J. L. Niekus, R. N. E. Barton, M. Street & T. Terberger (Eds.), A mind set on flint: Studies in honour of Dick Stapert (Vol. 16, pp. 343-54). Groningen University Library.

Søndergaard, M., Christensen, M., Borup, K. A., Yin, H. & Iversen, B. B. (2013). Thermoelectric Properties of the Entire Composition Range in Mg₂Si_0.9925−xSn_xSb_0.0075. Journal of Electronic Materials, 42(7), 1417-1421. https://doi.org/10.1007/S11664-012-2282-4

Høyvik, I.-M., Jansik, B. & Jørgensen, P. (2012). Orbital localization using fourth central moment minimization. Journal of Chemical Physics, 137(22). https://doi.org/10.1063/1.4769866

Høyvik, I.-M., Jansik, B., Kristensen, K. & Jørgensen, P. (2013). Local Hartree-Fock orbitals using a three-level optimization strategy for the energy. Journal of Computational Chemistry, 34(15), 1311-1320. https://doi.org/10.1002/jcc.23256

Bourne, M., MacNiocaill, C., Knudsen, M. F., Thomas, A. & Henderson, G. (2012). A Comparison of two Brunhes Chron Geomagnetic Excursions Recorded by two Neighbouring North Atlantic Sites (ODP Sites 1062 and 1063). Geophysical Research Abstracts, 14, EGU2012-8145-1. http://meetingorganizer.copernicus.org/EGU2012/EGU2012-8145-1.pdf

Tuxen, A. K., Füchtbauer, H. G., Temel, B., Hinnemann, B., Topsøe, H., Knudsen, K. G., Besenbacher, F. & Lauritsen, J. V. (2012). Atomic-scale insight into adsorption of sterically hindered dibenzothiophenes on MoS₂ and Co-Mo-S hydrotreating catalysts. Journal of Catalysis, 295, 146-154. https://doi.org/10.1016/j.jcat.2012.08.004

G. Volosniev, A., V. Fedorov, D., S. Jensen, A. & Zinner, N. T. (2013). Occurrence conditions for two-dimensional Borromean systems. The European Physical Journal D: Atomic, Molecular, Optical and Plasma Physics, 67(95). https://doi.org/10.1140/epjd/e2013-30693-5

Rysgaard, S. (2012). Arctic Geomicrobiology and Climate Change. In ArcticNet Annual Progress Report (pp. 532-538) http://www.arcticnet.ulaval.ca/research/summary.php?project_id=81

Andersen, M. Ø., Howard, K. A. & Kjems, J. (2009). RNAi using a chitosan/siRNA nanoparticle system: in vitro and in vivo applications. In Methods in Molecular Biology (Vol. 555, pp. 77-86) https://doi.org/10.1007/978-1-60327-295-7_6

Piwpuan, N., Zhai, X. & Brix, H. (2013). Nitrogen nutrition of Cyperus laevigatus and Phormium tenax: Effects of ammonium versus nitrate on growth, nitrate reductase activity and N uptake kinetics. Aquatic Botany, 106, 42-51. https://doi.org/10.1016/j.aquabot.2013.01.002

Bøjesen, E. D., Søndergaard, M., Christensen, M. & Iversen, B. B. (2011). Particle size effects on the thermal conductivity of ZnO. AIP Conference Proceedings, 1449. https://doi.org/10.1063/1.4731565

Sørensen, J. G., Loeschcke, V. & Kristensen, T. N. (2013). Cellular damage as induced by high temperature is dependent on rate of temperature change - investigating consequences of ramping rates on molecular and organismal phenotypes in Drosophila melanogaster. Journal of Experimental Biology, 216(Pt 5), 809-814. https://doi.org/10.1242/jeb.076356

Feliu, E. & Wiuf, C. H. (2012). Enzyme-sharing as a cause of multi-stationarity in signalling systems. Journal of the Royal Society. Interface, 9(71), 1224-1232. https://doi.org/10.1098/rsif.2011.0664

Simonsen, M., Maetschke, S. R. & Ragan, M. A. (2012). Automatic selection of reference taxa for protein-protein interaction prediction with phylogenetic profiling. Bioinformatics, 28(6), 851-857. https://doi.org/10.1093/bioinformatics/btr720

Thomsen, P. F., Kielgast, J., Iversen, L. L., Wiuf, C. H., Rasmussen, M., Gilbert, M. T. P., Orlando, L. A. A. & Willerslev, E. (2012). Monitoring endangered freshwater biodiversity using environmental DNA. Molecular Ecology, 21(11), 2565-2573. https://doi.org/10.1111/j.1365-294X.2011.05418.x

Dalsgaard, B., Carstensen, D. W., Kirkconnell, A., Gonzalez, A. M. M., Garcia, O. M., Timmermann, A. & Sutherland, W. J. (2012). Floral traits of plants visited by the bee hummingbird (Mellisuga helenae). Ornitologia Neotropical, 23(1), 143-149.

Noreika, N. & Kotze, D. J. (2012). Forest edge contrasts have a predictable effect on the spatial distribution of carabid beetles in urban forests. Journal of Insect Conservation, 16(6), 867-881. https://doi.org/10.1007/s10841-012-9474-3

Jensen, F. (2013). Atomic orbital basis sets. Wiley Interdisciplinary Reviews: Computational Molecular Science, 3(3), 273-295. https://doi.org/10.1002/wcms.1123

Gagnaire, P.-A., Normandeau, E., Côté, C., Møller Hansen, M. & Bernatchez, L. (2012). The genetic consequences of spatially varying selection in the panmictic American eel (Anguilla rostrata). Genetics, 190(2), 725-36. https://doi.org/10.1534/genetics.111.134825

Klokmose, C. N. (2013). Visual Attributes for Face Images: A review of Describable Visual Attributes for Face Images, by Neraaj Kumar. Dissertation Reviews, (10. January). http://dissertationreviews.org/archives/2053

Álvarez-Rodríguez, R., Jensen, A. S., Garrido, E. & Fedorov, D. V. (2012). Three-particle decays of light-nuclei resonances. Physica Scripta, 2012(T150). https://doi.org/10.1088/0031-8949/2012/T150/014002

Finger, A., Kaiser-Bunbury, C. & Kettle, C. J. (2012). Development of polymorphic microsatellite markers of the Seychelles endemic tree Glionnetia sericea (Rubiaceae). Conservation Genetics Resources, 4(2), 239-241. https://doi.org/10.1007/s12686-011-9515-3

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