Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Juul-Pedersen, T., Arendt, K. E., Mortensen, J., Retzel, A., Nygaard, R., Burmeister, A., Sejr, M. K., Blicher, M. E., Krause-Jensen, D., Olesen, B., Labansen, A. L., Rasmussen, L. M., Witting, L., Boye, T., Simon, M. & Rysgaard, S. (2012). NUUK BASIC: The MarineBasis programme. In L. M. Jensen (Ed.), Nuuk Ecological Research Operations: 5th Annual Report 2011 (pp. 47-68). Aarhus University, DCE - Danish Centre for Environment and Energy. http://dce.au.dk/fileadmin/dce.au.dk/Udgivelser/NERO_2012.pdf

Pedersen, G. K., Pedersen, S. A. S., Bonde, N., Heilmann-Clausen, C., Larsen, L. M., Lindow, B., Madsen, H., Pedersen, A. K., Rust, J., Schultz, B. P., Storey, M. & Willumsen, P. S. (2011). Molerområdets geologi - sedimenter, fossiler, askelag og glacialtektonik. Geologisk Tidsskrift, 2011, 41-135.

Toker, J., Svendsen, A., Bochenkova, A. & Andersen, L. H. (2012). Probing the Barrier for Internal Rotation of the Retinal Chromophore†. Angewandte Chemie, 51(35), 8757-8761. https://doi.org/10.1002/anie.201203746

Regina, V. R., Søhoel, H., Lokanathan, A. R., Bischoff, C., Kingshott, P., Revsbech, N. P. & Meyer, R. L. (2012). Entrapment of Subtilisin in Ceramic Sol-Gel Coating for Antifouling Applications. A C S Applied Materials and Interfaces, 4, 5915-5921. https://doi.org/10.1021/am301554m

Christoffersen, C., Hansen, D. C., Poulsen, P. R. & Sørensen, T. S. (2013). Registration-based Reconstruction of Four-dimensional Cone Beam Computed Tomography. IEEE Transactions on Medical Imaging, 32(11), 2064 - 2077 . https://doi.org/10.1109/TMI.2013.2272882

Viteau, M., Huillery, P., Bason, M. G., Malossi, N., Ciampini, D., Morsch, O. & Arimondo, E. (2012). Cooperative Excitation and Many-Body Interactions in a Cold Rydberg Gas. Physical Review Letters, 109(5), 053002. https://doi.org/10.1103/PhysRevLett.109.053002

Masson-Delmotte, V., Swingedouw, D., Landais, A., Seidenkrantz, M.-S., Gauthier, E., Bichet, V., Massa, C., Perren, B., Jomelli, V., Adalgeirsdottir, G., Hesselbjerg Christensen, J., Pedersen, J. A., Bhatt, U., Walker, D. A., Elberling, B., Gillet-Chaulet, F., Ritz, C., Gallée, H., van den Broeke, M. ... Vinther, B. M. (2012). Greenland climate change: From the past to the future. Wiley Interdisciplinary Reviews: Climate Change, 3(5), 427-449. https://doi.org/10.1002/wcc.186

Li, D., Knudsen, M. F., Jiang, H., Olsen, J., Zhao, M., Li, T., Knudsen, K. L., Seidenkrantz, M.-S. & Sha, L. (2012). A diatom-based reconstruction of summer sea-surface salinity in the Southern Okinawa Trough, East China Sea, over the last millennium. Journal of Quaternary Science, 27(8), 771-779. https://doi.org/10.1002/jqs.2562

Sand, A., Pedersen, C. N. S., Mailund, T., Brodal, G. S. & Fagerberg, R. (2013). A practical O(n log² n) time algorithm for computing the triplet distance on binary trees. BMC Bioinformatics, 14(Suppl 2), S18. https://doi.org/10.1186/1471-2105-14-S2-S18

Brodal, G. S., Fagerberg, R., Mailund, T., Pedersen, C. N. S. & Sand, A. (2013). Efficient Algorithms for Computing the Triplet and Quartet Distance Between Trees of Arbitrary Degree. The Annual A C M - S I A M Symposium on Discrete Algorithms. Proceedings, 24, 1814-1832. http://knowledgecenter.siam.org/0236-000098/0236-000098/1

Faust, S., Hazay, C., Nielsen, J. B., Nordholt, P. S. & Zottarel, A. (2012). Signature Schemes Secure against Hard-to-Invert Leakage. Lecture Notes in Computer Science, 7658, 98-115. https://doi.org/10.1007/978-3-642-34961-4_8

Iversen, N. K., Nielsen, ARU., Wang, T. & Baatrup, E. (2013). Intravascular infusion of PEGylated Au nanoparticles affects cardiovascular function in healthy mice. Human & Experimental Toxicology, 32(2), 216-221.

Pearce, C., Seidenkrantz, M.-S., Massé, G. & Kuijpers, A. (2012). A succession of events at the Younger Dryas termination offshore Newfoundland. Abstract from Cell 50k meeting, Budapest, Hungary.

Zhu, G., Wang, S., Wang, W., Wang, Y., Zhou, L., Jiang, B., Op den Camp, H., Risgaard-Petersen, N., Schwark, L., Peng, Y., Hefting, M., Jetten, M. & Yin, C. (2013). Hotspots of anaerobic ammonia oxidation in land - freshwater interfaces. Nature Geoscience, 6, 103-107. https://doi.org/10.1038/ngeo1683

Risgaard-Petersen, N., Larsen, S., Pfeffer, C., Meyer, R. L., Schramm, A., Dong, M., Song, J., Revil, A., Meister, P. & Nielsen, L. P. (2013). Long distance electron transport in marine sediments: Microbial and geochemical implications. Abstract from Isme14, Copenhagen, Denmark.

Safi, K., Hawes, I. & Sorrell, B. K. (2012). Microbial population responses in three stratified Antarctic meltwater ponds during the autumn freeze. Antarctic Science, 24, 571-588. https://doi.org/10.1017/S0954102012000636

Grinsted, L. & Bilde, T. (2013). Effects of within-colony competition on body size asymmetries and reproductive skew in a social spider. Journal of Evolutionary Biology, 26(3), 553-561. https://doi.org/10.1111/jeb.12072

Grinsted, L., Agnarsson, I. & Bilde, T. (2012). Subsocial behaviour and brood adoption in mixed-species colonies of two theridiid spiders. Naturwissenschaften, 99(12), 1021-1030.

Settepani, V., Grinsted, L., Pedersen, J. G., Jensen, J. L. & Bilde, T. (2013). Task specialization in two social spiders, Stegodyphus sarasinorum (Eresidae) and Anelosimus eximius (Theridiidae). Journal of Evolutionary Biology, 26(1), 51-62. https://doi.org/10.1111/jeb.12024

Midtgaard, J. & Might, M. (Eds.) (2012). Proceedings of the Fourth International Workshop on Numerical and Symbolic Abstract Domains, NSAD 2012. Elsevier. https://doi.org/10.1016/j.entcs.2012.09.001

Hyldgaard, B., Sorrell, B. K., Olesen, B., Riis, T. & Brix, H. (2012). Geographically distinct Ceratophyllum demersum populations differ in growth, photosynthetic responses and phenotypic plasticity to nitrogen availability. Functional Plant Biology, 39(774-783). https://doi.org/10.1071/FP12068

Jensen, F. (2012). Polarization Consistent Basis Sets. VII. The Elements K, Ca, Ga, Ge, As, Se, Br and Kr. Journal of Chemical Physics, 136(11). https://doi.org/10.1063/1.3690460

Halskov, K. S., Johansen, T. K., Davis, R., Hoff Steurer, M. M., Jensen, F. & Jørgensen, K. A. (2012). Cross-trienamines in Asymmetric Organocatalysis. Journal of the American Chemical Society, 134(31), 12943-12946. https://doi.org/10.1021/ja3068269

Hedegård, E. D., Jensen, F. & Kongsted, J. (2012). Basis Set Recommendations for DFT Calculations of Gas-Phase Optical Rotation at Different Wavelengths. Journal of Chemical Theory and Computation, 8(11), 4425–4433. https://doi.org/10.1021/ct300359s

List, N. H., Olsen, J. M. H., Rocha-Rinza, T., Christiansen, O. & Kongsted, J. (2012). Performance of Popular XC-Functionals for the Description of Excitation Energies in GFP-Like Chromophore Models. International Journal of Quantum Chemistry, 112(3), 789-800. https://doi.org/10.1002/qua.23059

Coriani, S., Fransson, T., Christiansen, O. & Norman, P. (2012). Asymmetric-Lanczos-Chain-Driven Implementation of Electronic Resonance Convergent Coupled-Cluster Linear Response Theory. Journal of Chemical Theory and Computation, 8(5), 1616-1628. https://doi.org/10.1021/ct200919e

Christiansen, O. (2012). Selected new developments in vibrational structure theory: potential construction and vibrational wave function calculations. Physical Chemistry Chemical Physics, 14(19), 6672-6687. https://doi.org/10.1039/C2CP40090A

Tamstorf, M. P., Citterio, M., Schmidt, N. M., Sejr, M. K. & Jensen, L. M. (2012). Executive summary. In L. M. Jensen (Ed.), Zackenberg Ecological Research Operations: 17th Annual Report 2011 (pp. 6-9). Aarhus University, DCE - Danish Centre for Environment and Energy. http://dce.au.dk/fileadmin/dce.au.dk/Udgivelser/ZERO_2012.pdf

Sejr, M. K., Juul-Pedersen, T., Frandsen, E. R., Blicher, M. & Lennart, I. (2012). Zackenberg Basic: The MarineBasis programme. In L. M. Jensen (Ed.), Zackenberg Ecological Research Operations: 17th Annual Report 2011 (pp. 65-74). Aarhus University, DCE - Danish Centre for Environment and Energy. http://dce.au.dk/fileadmin/dce.au.dk/Udgivelser/ZERO_2012.pdf

Sejr, M. K., Juul-Pedersen, T., Bruhn, A., Stedmon, C., Blicher, M., Dalsgaard, T., Petersen, N. F., McGinnis, D. F. & Krawczyk, D. (2012). Pelagic carbon cycling under influence of a melting ice cap. In L. M. Jensen (Ed.), Zackenberg Ecological Research Operations: 17th Annual Report 2011 (pp. 86-88). Aarhus University, DCE - Danish Centre for Environment and Energy. http://dce.au.dk/fileadmin/dce.au.dk/Udgivelser/ZERO_2012.pdf

Wang, H., Andersen, K. K., Vad, B. S. & Otzen, D. E. (2013). OmpA can form folded and unfolded oligomers. Biochimica et Biophysica Acta - Proteins and Proteomics, 1834(1), 127-136. https://doi.org/10.1016/j.bbapap.2012.09.002

Albrecht, A., Morana, F., Fraile Carrasco, A. & Jørgensen, K. A. (2012). Organophosphorus Reagents in Organocatalysis: Synthesis of Optically Active α-Methylene-δ-lactones and δ-Lactams. Chemistry: A European Journal, 18(33), 10348–10354. https://doi.org/10.1002/chem.201201325

Pedersen, V. K. & Egholm, D. L. (2013). Glaciations in response to climate variations preconditioned by evolving topography. Nature, 493(7431), 206-210. https://doi.org/10.1038/nature11786

Wang, H., Andersen, K. K., Sehgal, P., Hagedorn, J., Westh, P., Borch, K. & Otzen, D. E. (2013). pH regulation of the kinetic stability of the lipase from Thermomyces lanuginosus. Biochemistry, 52(1), 264-276. https://doi.org/10.1021/bi301258e

Jiang, H., Rodríguez-Escrich, C., Johansen, T. K., Davis, R. & Jørgensen, K. A. (2012). Organocatalytic Activation of Polycyclic Aromatic Compounds for Asymmetric Diels-Alder Reactions. Angewandte Chemie International Edition, 51(41), 10271–10274. https://doi.org/10.1002/anie.201205836

Jensen, K. L., Weise, C. F., Dickmeiss, G., Morana, F., Davis, R. & Jørgensen, K. A. (2012). Selective Access to Both Diastereoisomers in an Enantioselective Intramolecular Michael Reaction by Using a Single Chiral Organocatalyst and Application in the Formal Total Synthesis of (-)-Epibatidine. Chemistry: A European Journal, 18(38), 11913–11918. https://doi.org/10.1002/chem.201202353

Albrecht, L. K., Cruz Acosta, F., Fraile Carrasco, A., Albrecht, A., Christensen, J. & Jørgensen, K. A. (2012). Enantioselective H-Bond-Directing Approach for Trienamine-mediated Reactions in Asymmetric Synthesis. Angewandte Chemie International Edition, 51(36), 9088–9092. https://doi.org/10.1002/anie.201204790

Castagnini, A., Foldager, L. & Bertelsen, A. (2013). Excess mortality of acute and transient psychotic disorders: comparison with bipolar affective disorder and schizophrenia. Acta Psychiatrica Scandinavica, 128(5), 370-375. https://doi.org/10.1111/acps.12077

Hansen, R. B., Olsen, J., Jeppesen, E., Buchardt, B., Heinemeier, J., McGowan, S., Leavitt, P. R., Enevold, R. & Odgaard, B. V. (2013). Climate-driven changes in water level: a decadal scale multiproxy study recording the 8.2-ka event and ecosystem responses in Lake Sarup (Denmark). Journal of Paleolimnology, 49(2), 267-285. https://doi.org/10.1007/s10933-012-9673-7

Bason, M. G., Viteau, M., Malossi, N., Huillery, P., Arimondo, E., Ciampini, D., Fazio, R., Giovanetti, V., Mannella, R. & Morsch, O. (2011). High-fidelity quantum driving. Nature Physics, 8, 147-152. https://doi.org/10.1038/nphys2170

Gonzalez-Tizon, A. M., Rojo, V., Vierna, J., Jensen, K. T., Egea, E. & Martínez-Lage, M. (2012). Cytogenetics of the razor shells Ensis directus (Conrad, 1843) and E. minor (Chenu, 1843) (Mollusca: Bivalvia). Chromosome Research, 20(6), 806-807.

Skyt, P. S., Wahlstedt, I., Muren, L., Petersen, J. B. B. & Balling, P. (2012). Temperature and temporal dependence of the optical response for a radiochromic dosimeter. Medical Physics, 39(12), 7232. https://doi.org/10.1118/1.4764486

Moeslund, J. E., Arge, L., Bøcher, P. K., Dalgaard, T. & Svenning, J.-C. (2013). Topography as a driver of local terrestrial vascular plant diversity patterns. Nordic Journal of Botany, 31(2), 129-144. https://doi.org/10.1111/j.1756-1051.2013.00082.x

Nieto-Lugilde, D., Lenoir, J., Abdulhak, S., Aeschimann, D., Dullinger, S., Gégout, J.-C., Guisan, A., Pauli, H., Renaud, J., Theurillat, J.-P., Thuiller, W., Van Es, J., Vittoz, P., Willner, W., Wohlgemuth, T., Zimmermann, N. E. & Svenning, J.-C. (2012). Large-scale biotic interaction effects - tree cover interacts with shade toler-ance to affect distribution patterns of herb and shrub species across the Alps.

Madsen, L. B., Jensen, F., Tolstikhin, O. I. & Morishita, T. (2013). Structure factors for tunneling ionization rates of molecules. Physical Review A, 87(1), 013406. https://doi.org/10.1103/PhysRevA.87.013406

Svane, A., C. Albers, R., E. Christensen, N., van Schilfgaarde, M., N. Chantis, A. & Zhu, J.-X. (2013). Electronic Correlation Strength of Pu. Physical Review B, 87(4). https://doi.org/10.1103/PhysRevB.87.045109

Jensen, N. S. & Olson, K. R. (2012). Hydrogen sulfide mediates hypoxic vasoconstriction through a production of mitochondrial ROS in trout gills. American Journal of Physiology: Regulatory, Integrative and Comparative Physiology, 303, R487-R494. https://doi.org/10.1152/ajpregu.00151.2012

Taylor, E. W., Jensen, N. S., Leite, C. A. C., Sartori, M., de Paula, G. S. & Abe, A. S. (2012). Autonomic control of heart rate is virtually independent of temperature but seems related to the neuroanatomy of the efferent vagal supply to the heart in the bullfrog, Lithobathes catesbeianus. Journal of Thermal Biology, 37(3), 243-247. https://doi.org/10.1016/j.jtherbio.2012.01.007

Overgaard, J. & Wang, T. (2012). Metabolic Transitions During Feast and Famine in Spiders. In M. D. McCue (Ed.), Comparative Physiology of Fasting, Starvation and Food Limitation (pp. 53-68). Springer. https://doi.org/10.1007/978-3-642-29056-5_5

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