Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Benito, J., Fraile, L. M., Korgul, A., Piersa-Siłkowska, M., Jaries, A., Stryjczyk, M., Adamska, E., Álvarez-Rodríguez, R., Andreyev, A. N., Barzakh, A. E., Benzoni, G., Berry, T., Borge, M. J. G., Carmona, M., Chrysalidis, K., Costache, C., Cubiss, J. G., Day Goodacre, T., De Witte, H. ... IDS and IGISOL Collaboration (2024). Detailed structure of ¹³¹Sn populated in the β decay of isomerically purified ¹³¹In states. Physical Review C, 110(1), Article 014328. https://doi.org/10.1103/PhysRevC.110.014328

Malle, M. G., Song, P., Löffler, P. M. G., Kalisi, N., Yan, Y., Valero, J., Vogel, S. & Kjems, J. (2024). Programmable RNA Loading of Extracellular Vesicles with Toehold-Release Purification. Journal of the American Chemical Society, 146(18), 12410-12422. https://doi.org/10.1021/JACS.3C13123

Aticho, A., Beyene, A., Aynalem Zelelew, S., Puok, C., Mekonnen Gutema, T., Christian Svenning, J. & Chala, D. (2024). A neglected wetland in human-dominated landscape shields avifauna from seasonal harsh conditions in Gambella, western Ethiopia. Journal for Nature Conservation, 81, Article 126694. https://doi.org/10.1016/j.jnc.2024.126694

Smidt, J. M., Märcher, A., Skaanning, M. K., El-Chami, K., Teodori, L., Omer, M., Kjems, J. & Gothelf, K. V. (2024). Dual-Targeting of the HER2 Cancer Receptor with an Antibody-Directed Enzyme and a Nanobody-Guided MMAE Prodrug Scaffold. ChemBioChem, 25(18), Article e202400437. https://doi.org/10.1002/cbic.202400437

Hordijk, I., Bialic-Murphy, L., Lauber, T., Routh, D., Poorter, L., Rivers, M. C., ter Steege, H., Liang, J., Reich, P. B., de-Miguel, S., Nabuurs, G. J., Gamarra, J. G. P., Chen, H. Y. H., Zhou, M., Wiser, S. K., Pretzsch, H., Paquette, A., Picard, N., Hérault, B. ... Crowther, T. W. (2024). Dominance and rarity in tree communities across the globe: Patterns, predictors and threats. Global Ecology and Biogeography, 33(10), Article e13889. https://doi.org/10.1111/geb.13889

Schweiger, A. H. & Svenning, J. C. (2024). Climatic disequilibrium in tree cover is frequent in protected areas worldwide — implications for conservation and restoration. Journal of Vegetation Science, 35(4), Article e13298. https://doi.org/10.1111/jvs.13298

Christensen, H. B. (2024). Flexible, Reliable Software, 2nd Edition, Part VI: A Design Pattern Catalogue.

Aagaard, A., Bechsgaard, J., Sørensen, J. G., Sandfeld, T., Settepani, V., Bird, T. L., Lund, M. B., Malmos, K. G., Falck-Rasmussen, K., Darolti, I., Nielsen, K. L., Johannsen, M., Vosegaard, T., Tregenza, T., Verhoeven, K. J. F., Mank, J. E., Schramm, A. & Bilde, T. (2024). Molecular Mechanisms of Temperature Tolerance Plasticity in an Arthropod. Genome Biology and Evolution, 16(8), Article evae165. https://doi.org/10.1093/gbe/evae165

Tariq, M., Saqib, M., Rahim, A. & Sutherland, D. S. (2024). The substantial role of TiO₂ in bimetallic alloy nanoparticle arrangement: electrocatalytic determination of glucose at Ni-Co@TiO₂@GCE. Journal of Materials Science: Materials in Electronics, 35(22), Article 1525. https://doi.org/10.1007/s10854-024-13272-2

Keller, H., Möllering, H., Schneider, T., Tkachenko, O. & Zhao, L. (2024). Secure Noise Sampling for DP in MPC with Finite Precision. In ARES '24: Proceedings of the 19th International Conference on Availability, Reliability and Security Article 25 Association for Computing Machinery. https://doi.org/10.1145/3664476.3664490

Rattan, S., Bartke, A., Rose, M. R., Lim, L. W., Caruso, C., Ulfhake, B. & Olovnikov, A. (2024). Holistic approaches to healthy longevity. In A. Trukhanov & M. Chan (Eds.), Handbook on Longevity Medicine: The Road Map (pp. 247-286). European Wellness Academy. https://doi.org/10.69669/wn5724

Almpanis, A., Slater, L. & Power, C. (2024). Monitoring carbon-based remediation of DNAPL-contaminated groundwater via spectral induced polarization. Journal of Environmental Management, 368, Article 122111. https://doi.org/10.1016/j.jenvman.2024.122111

Wong, E., Grønbæk, J. E. & Velloso, E. (2024). The Jamais Vu Efect: Understanding the Fragile Illusion of Co-presence in Mixed Reality. In A. Vallgarda, L. Jonsson, J. Fritsch, S. F. Alaoui & C. A. Le Dantec (Eds.), DIS '24: Proceedings of the 2024 ACM Designing Interactive Systems Conference (pp. 2227-2246). Association for Computing Machinery, Inc.. https://doi.org/10.1145/3643834.3661574

Zhang, W., Wang, J., Chen, M. & Dong, M. (2024). Sustainable synthesis: Unlocking potential with plasma-assisted conversion. Matter, 7(8), 2764-2765. https://doi.org/10.1016/j.matt.2024.06.033

Cancel Vazquez, S. M., Rooney, T. O., Brown, E. L., Bollinger, A., Bastow, I. D., Steiner, R. A. & Kappelman, J. (2024). Basaltic Pulses and Lithospheric Thinning—Plio-Pleistocene Magmatism and Rifting in the Turkana Depression (East African Rift System). Journal of Geophysical Research: Solid Earth, 129(8), Article e2024JB029166. https://doi.org/10.1029/2024JB029166

Jacobs, E. R., Gero, S., Malinka, C. E., Tønnesen, P. H., Beedholm, K., DeRuiter, S. L. & Madsen, P. T. (2024). Response to 'The active space of sperm whale codas allows for communication within and between social units'. Journal of Experimental Biology, 227(15), Article 227. https://doi.org/10.1242/jeb.247896

Wang, C., Liu, L., Yin, M., Liu, B., Wu, Y., Eller, F., Gao, Y., Brix, H., Wang, T., Guo, W. & Salojärvi, J. (2024). Chromosome-level genome assemblies reveal genome evolution of an invasive plant Phragmites australis. Communications Biology, 7(1), Article 1007. https://doi.org/10.1038/s42003-024-06660-1

Pedersen, C. N., Yang, F., Ita, S., Xu, Y., Akunuri, R., Trampari, S., Neumann, C. M. T., Desdorf, L. M., Schiøtt, B., Salvino, J. M., Mortensen, O. V., Nissen, P. & Shahsavar, A. (2024). Cryo-EM structure of the dopamine transporter with a novel atypical non-competitive inhibitor bound to the orthosteric site. Journal of Neurochemistry, 168(9), 2043-2055. https://doi.org/10.1111/jnc.16179

Lund, M. N., Basu, S., Bieryla, A., Casagrande, L., Huber, D., Hekker, S., Viani, L., Davies, G. R., Campante, T. L., Chaplin, W. J., Serenelli, A. M., Joel Ong, J. M., Ball, W. H., Stokholm, A., Bellinger, E. P., Bazot, M., Stello, D., Latham, D. W., White, T. R. ... Chontos, A. (2024). The K2 Asteroseismic KEYSTONE sample of Dwarf and Subgiant Solar-Like Oscillators: I. Data and Asteroseismic parameters. Astronomy and Astrophysics, 688, Article A13. https://doi.org/10.1051/0004-6361/202450055

Ge, J., Slotsbo, S., Sørensen, J. G. & Holmstrup, M. (2024). Does copper contamination change thermotaxis of the soil arthropod Folsomia candida (Collembola)? Journal of Thermal Biology, 124, Article 103950. https://doi.org/10.1016/j.jtherbio.2024.103950

Yang, Y., Zhao, R. & Chen, Y. P. (2024). Expanded graphite with boron-doping for cathode materials of high-capacity and stable aluminum ion batteries. RSC Advances, 14(33), 23902-23909. https://doi.org/10.1039/d4ra03161j

Simões, R. V., Henriques, R. N., Olesen, J. L., Cardoso, B. M., Fernandes, F. F., Monteiro, M. AV., Jespersen, S. N., Carvalho, T. & Shemesh, N. (2024). Deuterium Metabolic Imaging Phenotypes Mouse Glioblastoma Heterogeneity Through Glucose Turnover Kinetics. eLife Sciences Publications Ltd. https://doi.org/10.7554/elife.100570.1

Lee, S. F. H., Chapman, S. K., Mozdzer, T. J., Eller, F. & Langley, J. A. (2024). Does introduced European Phragmites australis experience belowground microbial enemy release in North America? Ecosphere, 15(8), Article e4952. https://doi.org/10.1002/ecs2.4952

Mehmood, S., Thirup, S. S., Ahmed, S., Bashir, N., Saeed, A., Rafiq, M., Saeed, Q., Najam-ul-Haq, M., Khaliq, B., Ibrahim, M., Alonazi, W. B. & Akrem, A. (2024). Crystal structure of Kunitz-type trypsin inhibitor: Entomotoxic effect of native and encapsulated protein targeting gut trypsin of Tribolium castaneum Herbst. Computational and Structural Biotechnology Journal, 23, 3132-3142. https://doi.org/10.1016/j.csbj.2024.07.023

Takahashi, K., Lee, Y., Fago, A., Bautista, N. M., Storz, J. F., Kawamoto, A., Kurisu, G., Nishizawa, T. & Tame, J. R. H. (2024). The unique allosteric property of crocodilian haemoglobin elucidated by cryo-EM. Nature Communications, 15(1), Article 6505. https://doi.org/10.1038/s41467-024-49947-x

Søgaard, I. & Barfod, G. H. (2024). Compositions and Raw Materials of Jewellery from the Northwest Quarter. In A. Lichtenberger & R. Raja (Eds.), Miscellaneous Objects: Final Publications from the Danish-German Jerash Northwest Quarter Project VI (pp. 159-170). Brepols Publishers. https://doi.org/10.1484/M.JP-EB.5.136437

Hudert, M., Lindemann, D., Mangliár, L. & Swann, A. (2024). Computing irregular hypar-based quad-mesh patterns for segmented timber shells. Computer-Aided Design, 177, Article 103772. https://doi.org/10.1016/j.cad.2024.103772

Marshall, I. P. G. (2024). Electromicrobiological concentration cells are an overlooked potential energy conservation mechanism for subsurface microorganisms. Frontiers in Microbiology, 15, Article 1407868. https://doi.org/10.3389/fmicb.2024.1407868

Grønbech, T. B. E., Kasai, H., Zhang, J., Nishibori, E. & Iversen, B. B. (2024). Weak Bonding and Anharmonicity in Thermoelectric ZnSb. Advanced Functional Materials, 34(33), Article 2401703. https://doi.org/10.1002/adfm.202401703

Matsuno, T., Amarsi, A. M., Carlos, M. & Nissen, P. E. (2024). 3D non-local thermodynamic equilibrium magnesium abundances reveal a distinct halo population. Astronomy and Astrophysics, 688, Article A72. https://doi.org/10.1051/0004-6361/202450057

Ozbek, D., Alalawi, M., Eckroth, T. M. & Wessely, M. (2024). Demonstration of AcceloPrint: Fabricating Accelerometers with Multi-Material 3D Printing. In M. Wessely, V. Savage, P. Didyk & J. Martinez (Eds.), SCF Adjunct '24: Adjunct Proceedings of the 9th ACM Symposium on Computational Fabrication Article 8 Association for Computing Machinery, Inc.. https://doi.org/10.1145/3665662.3673256

Jiang, Y., Kleinau, J., Eckroth, T. M., Hoggan, E., Mueller, S. & Wessely, M. (2024). Demonstrating MouthIO: Customizable Oral User Interfaces with Integrated Sensing and Actuation. In M. Wessely, V. Savage, P. Didyk & J. Martinez (Eds.), SCF Adjunct '24: Adjunct Proceedings of the 9th ACM Symposium on Computational Fabrication Article 6 Association for Computing Machinery, Inc.. https://doi.org/10.1145/3665662.3673254

Castro, S. A., Prado, J. V., Wang, T. & Leite, C. A. C. (2024). The relevance of vascular adjustments to hemodynamic control in the face of temperature change in Crotalus durissus. Journal of Experimental Biology, 227(15), Article jeb247724. https://doi.org/10.1242/jeb.247724

Søgaard, A. B., Skovbo, F., Tvilum, A., Hansson, R. F. & Zelikin, A. N. (2024). Artificial Internalizing Receptor Affords Fast, Potent, Specific Drug Delivery to the Chemically Engineered Cells. Advanced Functional Materials, 34(33), Article 2400048. https://doi.org/10.1002/adfm.202400048

Ullah, I., Tariq, M., Abdullah, A. Z., Muhammad, M., Khan, J. & Rahim, A. (2024). Photocatalytic Degradation of Methyl Red and Methyl Blue Dyes with Doped-Titanium Dioxide Nanoparticles in the Presence of Peroxymonosulfate Oxidant. International Journal of Environmental Research, 18(6), Article 96. https://doi.org/10.1007/s41742-024-00653-y

Zhang, X. L., Li, Y. X., Berglund, N., Burgdorf, J. S., Donello, J. E., Moskal, J. R. & Stanton, P. K. (2024). Zelquistinel acts at an extracellular binding domain to modulate intracellular calcium inactivation of N-methyl-D-aspartate receptors. Neuropharmacology, 259, Article 110100. https://doi.org/10.1016/j.neuropharm.2024.110100

Aranha, D. F., Costache, A., Guimaraes, A. & Soria-Vazquez, E. (2025). HELIOPOLIS: Verifiable Computation over Homomorphically Encrypted Data from Interactive Oracle Proofs is Practical. In K.-M. Chung & Y. Sasaki (Eds.), Advances in Cryptology – ASIACRYPT 2024 - 30th International Conference on the Theory and Application of Cryptology and Information Security, Proceedings (Vol. V, pp. 302-334). Springer. https://doi.org/10.1007/978-981-96-0935-2_10

Stanek, D. B., Maindal, N., Greve, L. & Poulsen, S. H. (2024). “I Think You Should Make All Museum Exhibitions with This Approach”: Benefits and Challenges in Co-creating an Exhibition at a Science Museum with Young People. The International Journal of the Inclusive Museum, 18(1), 95-113. https://doi.org/10.18848/1835-2014/CGP/v18i01/95-113

Mayfield, J. M., Hitefield, N. L., Czajewski, I., Vanhye, L., Holden, L., Morava, E., van Aalten, D. M. F. & Wells, L. (2024). O-GlcNAc transferase congenital disorder of glycosylation (OGT-CDG): Potential mechanistic targets revealed by evaluating the OGT interactome. Journal of Biological Chemistry, 300(9), Article 107599. https://doi.org/10.1016/j.jbc.2024.107599

Ma, R., Zhang, X., Sutherland, D., Bochenkov, V. & Deng, S. (2024). Nanofabrication of nanostructure lattices: from high-quality large patterns to precise hybrid units. International Journal of Extreme Manufacturing, 6(6), Article 062004. https://doi.org/10.1088/2631-7990/ad6838

Alqasim, A., Grieves, N., Rosário, N. M., Gandolfi, D., Livingston, J. H., Sousa, S., Collins, K. A., Teske, J. K., Fridlund, M., Egger, J. A., Cabrera, J., Hellier, C., Lanza, A. F., Van Eylen, V., Bouchy, F., Oelkers, R. J., Srdoc, G., Shectman, S., Günther, M. ... Yee, S. W. (2024). TOI−757 b: an eccentric transiting mini−Neptune on a 17.5−d orbit. Monthly Notices of the Royal Astronomical Society, 533(1), 1-26. https://doi.org/10.1093/mnras/stae1767

Tkáč, V., Vorobiov, S., Baloh, P., Vondráček, M., Springholz, G., Carva, K., Szabó, P., Hofmann, P. & Honolka, J. (2024). Multiphase superconductivity at the interface between ultrathin FeTe islands and Bi₂Te₃. npj 2D Materials and Applications, 8(1), Article 52. https://doi.org/10.1038/s41699-024-00480-x

Wei, F., Qiu, X., Wang, B., Lu, S., Zhang, L., Yi, G., Feng, Y., Nie, J., Shao, P., Liu, W., Yang, L., Wang, A. J. & Luo, X. (2024). Electrodeposited Palladium Nanoparticles Enhancing Atomic Hydrogen-Mediated Electrochemical Recovery of Antimony. ACS ES&T Engineering, 4(7), 1668-1678. https://doi.org/10.1021/acsestengg.4c00078

Rybiczka-Tešulov, M., Garritsen, O., Venø, M. T., Wieg, L., Dijk, R. V., Rahimi, K., Gomes-Duarte, A., Wit, M. D., van de Haar, L. L., Michels, L., van Kronenburg, N. C. H., van der Meer, C., Kjems, J., Vangoor, V. R. & Pasterkamp, R. J. (2024). Circular RNAs regulate neuron size and migration of midbrain dopamine neurons during development. Nature Communications, 15(1), Article 6773. https://doi.org/10.1038/s41467-024-51041-1

Draganov, A. A., Saulpic, D. & Schwiegelshohn, C. (2024). Settling Time vs. Accuracy Tradeoffs for Clustering Big Data. Proceedings of the ACM on Management of Data, 2(3), Article 173. https://doi.org/10.1145/3654976

Saeed, K. H., Strunge, K., Pedersen, K. B., Truelsen, S. F., Christensen, S. M., Olsen, L., Schiøtt, B. & Weidner, T. (2024). Investigating Lipase/Stain Interactions: Determining Interfacial Protein Conformation with Surface Spectroscopy. The journal of physical chemistry. B, 128(34), 8162-8169. https://doi.org/10.1021/acs.jpcb.4c03173

de Vos, J. M., Streiff, S. J. R., Bachelier, J. B., Epitawalage, N., Maurin, O., Forest, F. & Baker, W. J. (2024). Phylogenomics of the pantropical Connaraceae: revised infrafamilial classification and the evolution of heterostyly. Plant Systematics and Evolution, 310(4), Article 29. https://doi.org/10.1007/s00606-024-01909-y

Hobor, S., Al Bakir, M., Hiley, C. T., Skrzypski, M., Frankell, A. M., Bakker, B., Watkins, T. B. K., Markovets, A., Dry, J. R., Brown, A. P., van der Aart, J., van den Bos, H., Spierings, D., Oukrif, D., Novelli, M., Chakrabarti, T., Rabinowitz, A. H., Ait Hassou, L., Litière, S. ... TRACERx Consortium (2024). Mixed responses to targeted therapy driven by chromosomal instability through p53 dysfunction and genome doubling. Nature Communications, 15(1), Article 4871. https://doi.org/10.1038/s41467-024-47606-9

Melissaris Papanikolaou, N., Rachuri, R., Baum, C. & Scholl, P. (2024). Cheater Identification on a Budget: MPC with Identifiable Abort from Pairwise MACs. 454-488. Paper presented at 44th Annual International Cryptology Conference - CRYPTO 2024, Santa Barbara, California, United States. https://doi.org/10.1007/978-3-031-68397-8_14

Nel, L., Thaysen, K., Jamecna, D., Frain, K. M., Olesen, E., Szomek, M., Langer, J., Höglinger, D., Wüstner, D. & Pedersen, B. P. (2024). Structural and biochemical analysis of ligand binding in yeast Niemann-Pick type C1-related protein. https://doi.org/10.1101/2024.06.10.598172v1

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