Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Ladefoged, L. K., Munro, L. J., Juel Pedersen, A., Lummis, S. C. R., Bang-Andersen, B., Balle, T., Schiøtt, B. & Kristensen, A. S. (2018). Modeling and mutational analysis of the binding mode for the multimodal antidepressant drug vortioxetine to the human 5-HT3A receptor. Molecular Pharmacology, 94(6), 1421-1434. https://doi.org/10.1124/mol.118.113530

Bryce, C., Blackwell, N., Schmidt, C., Otte, J., Huang, Y.-M., Kleindienst, S., Tomaszewski, E., Schad, M., Warter, V., Peng, C., Byrne, J. M. & Kappler, A. (2018). Microbial anaerobic Fe(II) oxidation - Ecology, mechanisms and environmental implications. Environmental Microbiology, 20(10), 3462-3483. https://doi.org/10.1111/1462-2920.14328

Hansen, C. C. R., Hvilsom, C., Schmidt, N. M., Aastrup, P., van Coeverden de Groot, P. J. & Siegismund, H. R. (2018). The muskox lost a substantial part of its genetic diversity on its long road to Greenland. Current Biology, 28(24), 4022-4028. https://doi.org/10.1016/j.cub.2018.10.054

Khalafinejad, S., Salz, M., Cubillos, P. E., Zhou, G., von Essen, C., Husser, T.-O., Bayliss, D. D. R., Lopez-Morales, M., Dreizler, S., Schmitt, J. H. M. M. & Lueftinger, T. (2018). The atmosphere of WASP-17b: Optical high-resolution transmission spectroscopy. Astronomy & Astrophysics (A&A), 618, Article 98. https://doi.org/10.1051/0004-6361/201732029

Khazali, M. (2018). Progress towards macroscopic spin and mechanical superposition via Rydberg interaction. Physical Review A, 98(4), Article 043836. https://doi.org/10.1103/PhysRevA.98.043836

Prieto-Arranz, J., Palle, E., Gandolfi, D., Barragan, O., Guenther, E. W., Dai, F., Fridlund, M., Hirano, T., Livingston, J., Luque, R., Niraula, P., Persson, C. M., Redfield, S., Albrecht, S., Alonso, R., Antoniciello, G., Cabrera, J., Cochran, W. D., Csizmadia, S. ... Winn, J. N. (2018). Mass determination of the 1: 3:5 near-resonant planets transiting GJ 9827 (K2-135). Astronomy & Astrophysics (A&A), 618, Article 116. https://doi.org/10.1051/0004-6361/201832872

Hartfield, M., Wright, S. I. & Agrawal, A. F. (2018). Coalescence and linkage disequilibrium in facultatively sexual diploids. Genetics, 210(2), 683-701. https://doi.org/10.1534/genetics.118.301244

Skov, L., Hui, R., Shchur, V., Hobolth, A., Scally, A., Schierup, M. H. & Durbin, R. (2018). Detecting archaic introgression using an unadmixed outgroup. PLOS Genetics, 14(9), Article e1007641. https://doi.org/10.1371/journal.pgen.1007641

Zheng, J., Richardson, T. G., Millard, L. A. C., Hemani, G., Elsworth, B. L., Raistrick, C. A., Vilhjalmsson, B., Neale, B. M., Haycock, P. C., Smith, G. D. & Gaunt, T. R. (2018). PhenoSpD: an integrated toolkit for phenotypic correlation estimation and multiple testing correction using GWAS summary statistics. GigaScience, 7(8), 1-10. https://doi.org/10.1093/gigascience/giy090

Bødker, S., Larsen-Ledet, I., Roque, L. & Thomas, V. J. (2018). Taming a Run-Away Object: How to Maintain and Extend Human Control in Human-Computer Interaction?. 1-6. Paper presented at 2018 CHI Conference on Human Factors in Computing Systems, CHI 2018, Montreal, Canada. https://ex-situ.lri.fr/content/7-workshops/2-rethinkinginteraction-18/1-papers/bodker-taming-a-runaway-object.pdf

Dang, M., Basson, L., Bach, L., Sonne, C., Nørregaard, R. & Nowak, B. (2019). Trichodinid infections in internal organs of shorthorn sculpin (Myoxocephalus scorpius) collected around an industrial harbour in Nuuk, Greenland. Parasitology, 146(4), 506-510. https://doi.org/10.1017/S0031182018001774

Loss, J., Maurer, U. & Tschudi, D. (2018). Strong Separations Between Broadcast and Authenticated Channels. In U. Schmid & J. Widder (Eds.), 32nd International Symposium on Distributed Computing (DISC 2018) (Vol. 121, pp. 36:1-36:17). Article 36 Dagstuhl Publishing. https://doi.org/10.4230/LIPIcs.DISC.2018.36

Nissen, P. E., Aguirre, V. S., Christensen-Dalsgaard, J., Collet, R., Grundahl, F. & Slumstrup, D. (2017). High-precision abundances of elements in stars with asteroseismic ages. Proceedings of the International Astronomical Union, 13(S334), 166-169. https://doi.org/10.1017/S1743921317007906

van Oosterhout, A., Rasmussen, M. K., Hoggan, E. & Alonso, M. B. (2018). Knobology 2.0: Giving Shape to the Haptic Force Feedback of Interactive Knobs. In UIST 2018 Adjunct - Adjunct Publication of the 31st Annual ACM Symposium on User Interface Software and Technology: UIST '18 Adjunct (pp. 197-199). Association for Computing Machinery. https://doi.org/10.1145/3266037.3271649

Rattan, S. (2018). Age. Aarhus Universitetsforlag. Reflections

Nissen, P. E. & Gustafsson, B. (2018). High-precision stellar abundances of the elements - methods and applications. Astronomy and Astrophysics Review, 26(6), Article 6. https://doi.org/10.1007/s00159-018-0111-3

Berdyugina, S. V., Kuhn, J. R., Langlois, M., Moretto, G., Krissansen-Totton, J., Catling, D., Grenfell, J. L., Santl-Temkiv, T., Finster, K., Tarter, J., Marchis, F. & Apai, D. (2018). The Exo-Life Finder (ELF) telescope: New strategies for direct detection of exoplanet biosignatures and technosignatures. In Ground-based and Airborne Telescopes VII (Vol. 10700). SPIE - International Society for Optical Engineering. https://www.spiedigitallibrary.org/conference-proceedings-of-spie/10700/107004I/The-Exo-Life-Finder-ELF-telescope--New-strategies-for/10.1117/12.2313781.short?SSO=1

Jørgensen, A. C. S., Mosumgaard, J. R., Weiss, A., Aguirre, V. S. & Christensen-Dalsgaard, J. (2018). Coupling 1D stellar evolution with 3D-hydrodynamical simulations on the fly - I. A new standard solar model. Monthly Notices of the Royal Astronomical Society: Letters, 481(1), L35-L39. https://doi.org/10.1093/mnrasl/sly152

Madsen, T. B. & Swann, A. F. (2018). Toric geometry of Spin(7)-manifolds. arxiv.org. https://arxiv.org/abs/1810.12962

Jensen, T. W. & Greve, L. (2019). Ecological Cognition and Metaphor. Metaphor and Symbol, 34(1), 1-16. https://doi.org/10.1080/10926488.2019.1591720

Herschend, J., Koren, K., Roder, H. L., Brejnrod, A., Kuhl, M. & Burmolle, M. (2018). In Vitro Community Synergy between Bacterial Soil Isolates Can Be Facilitated by pH Stabilization of the Environment. Applied and Environmental Microbiology, 84(21), Article e01450-18. https://doi.org/10.1128/AEM.01450-18

Dalskov, A. P. K. & Orlandi, C. (2018). Can You Trust Your Encrypted Cloud?: An Assessment of SpiderOakONE's Security. In J. Kim, G.-J. Ahn & S. Kim (Eds.), ASIACCS 2018 - Proceedings of the 2018 ACM Asia Conference on Computer and Communications Security (pp. 343-355). Association for Computing Machinery. https://doi.org/10.1145/3196494.3196547

Ciampi, M. & Orlandi, C. (2018). Combining Private Set-Intersection with Secure Two-Party Computation. In D. Catalano & R. De Prisco (Eds.), Security and Cryptography for Networks - 11th International Conference, SCN 2018, Proceedings (Vol. 11035, pp. 464-482). Springer VS. https://doi.org/10.1007/978-3-319-98113-0

Jensen, K., Michaelsen , J. V., Larsen , M. T., Kristensen, T. N., Holmstrup, M. & Overgaard, J. (2018). Increased lipid accumulation but not reduced metabolism explains improved starvation tolerance in cold-acclimated arthropod predators. Naturwissenschaften, 105(11-12), Article 65. https://doi.org/10.1007/s00114-018-1593-6

Mosbacher, J. B., Michelsen, A., Stelvig, M., Hjermstad-Sollerud, H. & Schmidt, N. M. (2019). Muskoxen Modify Plant Abundance, Phenology, and Nitrogen Dynamics in a High Arctic Fen. Ecosystems, 22(5), 1095–1107. https://doi.org/10.1007/s10021-018-0323-4

Blicher-Mathiesen, G., Rasmussen, A., Rolighed, J., Andersen, H. E., Carstensen, M. V., Grewy, P., Wienke, J., Hansen, B. & Thorling, L. (2018). Landovervågningsoplande 2016: NOVANA. Aarhus University, DCE - Danish Centre for Environment and Energy. Videnskabelig rapport fra DCE - Nationalt Center for Miljø og Energi Vol. 273 http://dce2.au.dk/pub/SR273.pdf

Meiklejohn, S. & Mercer, R. (2018). Möbius: Trustless tumbling for transaction privacy. Proceedings on Privacy Enhancing Technologies, 2018(2), 105-121. https://doi.org/10.1515/popets-2018-0015

Yu, P., He, C. Q., Simon, A., Li, W., Mose, R., Thøgersen, M. K., Jørgensen, K. A. & Houk, K. N. (2018). Organocatalytic [6+4] Cycloadditions via Zwitterionic Intermediates: Chemo-, Regio-, and Stereoselectivities. Journal of the American Chemical Society, 140(42), 13726-13735. https://doi.org/10.1021/jacs.8b07575

Liu, J., Andersen, H. L., Al Bahri, O. K., Bhattacharyya, S., Rawal, A., Brand, H. E. A. & Sharma, N. (2018). Electrochemically activated solid synthesis: An alternative solid-state synthetic method. Dalton Transactions, 47(41), 14604-14611. https://doi.org/10.1039/c8dt02946f

Sonne, C. & Alstrup, A. K. O. (2019). Discussion: Peer-review under siege. Science of the Total Environment, 651(1), 1180-1181. https://doi.org/10.1016/j.scitotenv.2018.09.297

Smith, Y. E., Toomey, S., Napoletano, S., Kirwan, G., Schadow, C., Chubb, A. J., Mikkelsen, J. H., Oxvig, C. & Harmey, J. H. (2018). Recombinant PAPP-A resistant insulin-like growth factor binding protein 4 (dBP4) inhibits angiogenesis and metastasis in a murine model of breast cancer. BMC Cancer, 18, Article 1016. https://doi.org/10.1186/s12885-018-4950-0

Damgård, I., Orlandi, C. & Simkin, M. (2018). Yet Another Compiler for Active Security or: Efficient MPC Over Arbitrary Rings. In H. Shacham & A. Boldyreva (Eds.), Advances in Cryptology – CRYPTO 2018 - 38th Annual International Cryptology Conference, 2018, Proceedings (Vol. 10992, pp. 799-829). Springer VS. https://doi.org/10.1007/978-3-319-96881-0_27

Hazay, C., Orsini, E., Scholl, P. & Soria-Vazquez, E. (2018). TinyKeys: A New Approach to Efficient Multi-Party Computation. In H. Shacham & A. Boldyreva (Eds.), Advances in Cryptology – CRYPTO 2018 - 38th Annual International Cryptology Conference, 2018, Proceedings (Vol. 10993, pp. 3-33). Springer VS. https://doi.org/10.1007/978-3-319-96878-0_1

Barfod, A. A. S., Vilhelmsen, T. N., Jørgensen, F., Christiansen, A. V., Hyer, A. S., Straubhaar, J. & Møller, I. (2018). Contributions to uncertainty related to hydrostratigraphic modeling using multiple-point statistics. Hydrology and Earth System Sciences, 22(10), 5485-5508. https://doi.org/10.5194/hess-22-5485-2018, https://doi.org/10.5194/hess-22-5485-2018

Carrivick, J. L., Yde, J. C., Knudsen, N. T. & Kronborg, C. (2018). Ice-dammed lake and ice-margin evolution during the Holocene in the Kangerlussuaq area of west Greenland. Arctic, Antarctic, and Alpine Research, 50(1), Article e1420854. https://doi.org/10.1080/15230430.2017.1420854

Levy, L. B., Kelly, M. A., Applegate, P. A., Howley, J. A. & Virginia, R. A. (2018). Middle to late Holocene chronology of the western margin of the Greenland Ice Sheet: A comparison with Holocene temperature and precipitation records. Arctic, Antarctic, and Alpine Research, 50(1), Article e1414477. https://doi.org/10.1080/15230430.2017.1414477

Nutz, A. & Schuster, M. (2018). Comments on: “A leaf wax biomarker record of early Pleistocene hydroclimate from West Turkana, Kenya” by Lupien et al. [Quat. Sci. Rev. 186 (2018), 225–235]. Quaternary Science Reviews, 201, 505-507. https://doi.org/10.1016/j.quascirev.2018.10.014

Philippsen, B., Ivanovaite, L., Makhotka, K., Sauer, F. R., Riede, F. & Olsen, J. (2019). Eight new Late Pleistocene-Early Holocene AMS dates from the south-eastern Baltic. Radiocarbon: An International Journal of Cosmogenic Isotope Research, 61(2), 615-627. https://doi.org/10.1017/RDC.2018.153, https://doi.org/10.1017/RDC.2018.153

Friis, E. M., Crane, P. R. & Pedersen, K. R. (2018). Rightcania and kvacekispermum: Early cretaceous seeds from eastern north america and portugal provide further evidence of the early chloranthoid diversification. Fossil Imprint, 74(1-2), 65-76. https://doi.org/10.2478/if-2018-0006

Friis, E. M., Crane, P. R. & Pedersen, K. R. (2018). Extinct taxa of exotestal seeds close to austrobaileyales and nymphaeales from the early cretaceous of Portugal. Fossil Imprint, 74(1-2), 135-158. https://doi.org/10.2478/if-2018-0010

Von Balthazar, M., Pedersen, K. R. & Friis, E. M. (2005). Teixeiria lusitanica, a new fossil flower from the Early Cretaceous of Portugal with affinities to Ranunculales. Plant Systematics and Evolution, 255(1-2), 55-75. https://doi.org/10.1007/s00606-005-0347-z

Scharfenberger, U., Jeppesen, E., Beklioğlu, M., Søndergaard, M., Angeler, D. G., Cakiroglu, A. I., Drakare, S., Hejzlar, J., Mahdy, A., Papastergiadou, E., Sorf, M., Stefanidis, K., Tuvikene, A., Zingel, P. & Adrian, R. (2019). Effects of trophic status, water level, and temperature on shallow lake metabolism and metabolic balance: A standardized pan-European mesocosm experiment. Limnology and Oceanography, 64(2), 616-631. https://doi.org/10.1002/lno.11064

Baattrup-Pedersen, A., Larsen, S. E., Rasmussen, J. & Riis, T. (2019). The future of European water management: Demonstration of a new WFD compliant framework to support sustainable management under multiple stress. Science of the Total Environment, 654, 53-59. https://doi.org/10.1016/j.scitotenv.2018.11.008

Hazay, C., Orsini, E., Scholl, P. & Soria-Vazquez, E. (2018). Concretely Efficient Large-Scale MPC with Active Security (or, TinyKeys for TinyOT). In T. Peyrin & S. Galbraith (Eds.), Advances in Cryptology – ASIACRYPT 2018 - 24th International Conference on the Theory and Application of Cryptology and Information Security, Proceedings (Vol. 11274, pp. 86-117). Springer VS. https://doi.org/10.1007/978-3-030-03332-3_4

Scholl, P. (2018). Extending Oblivious Transfer with Low Communication via Key-Homomorphic PRFs. In M. Abdalla & R. Dahab (Eds.), Public-Key Cryptography - PKC 2018 (Vol. 10769, pp. 554-583). Springer VS. https://doi.org/10.1007/978-3-319-76578-5_19

Hsieh, Y. T., Jylhä, A., Orso, V., Andolina, S., Hoggan, E., Gamberini, L. & Jacucci, G. (2019). Developing hand-worn input and haptic support for real-world target finding. Personal and Ubiquitous Computing, 23(1), 117-132. https://doi.org/10.1007/s00779-018-1180-z

Danielsen, K. & Sørensen, H. K. (2018). Tre materialer til kildecentreret matematikhistorie. In K. Danielsen & H. K. Sørensen (Eds.), Snows spøgelseskort, Halleys livrenter og Cauchys integraler: Tre gode matematikhistorier (pp. 1-7). Matematiklærerforeningen.

Tudek, A., Lloret-Llinares, M. & Jensen, T. H. (2018). The multitasking polyA tail: nuclear RNA maturation, degradation and export. Philosophical Transactions of the Royal Society B: Biological Sciences, 373(1762), Article 20180169. https://doi.org/10.1098/rstb.2018.0169

Mosegaard, K. & Hansen, T. M. (2016). Inverse Methods: Problem Formulation and Probabilistic Solutions. In Integrated Imaging of the Earth: Theory and Applications (pp. 7-27). Wiley-Blackwell. https://doi.org/10.1002/9781118929063.ch2

Hansen, T. M. & Jacobsen, B. H. (2002). Efficient finite difference waveform modeling of selected phases using a moving zone. Computers & Geosciences, 28(7), 819-826. https://doi.org/10.1016/s0098-3004(01)00113-3

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