Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Abele, H., Alekou, A., Algora, A., Andersen, K., Baeßler, S., Barron-Pálos, L., Barrow, J., Baussan, E., Bentley, P., Berezhiani, Z., Beßler, Y., Bhattacharyya, A. K., Bianchi, A., Bijnens, J., Blanco, C., Kraljevic, N. B., Blennow, M., Bodek, K., Bogomilov, M. ... Zou, Y. (2023). Particle physics at the European Spallation Source. Physics Reports, 1023, 1-84. https://doi.org/10.1016/j.physrep.2023.06.001

Bruch, R. J., Gal-Yam, A., Yaron, O., Chen, P., Strotjohann, N. L., Irani, I., Zimmerman, E., Schulze, S., Yang, Y., Kim, Y. L., Bulla, M., Sollerman, J., Rigault, M., Ofek, E., Soumagnac, M., Masci, F. J., Fremling, C., Perley, D., Nordin, J. ... Yan, L. (2023). The Prevalence and Influence of Circumstellar Material around Hydrogen-rich Supernova Progenitors. Astrophysical Journal, 952(2), Article 119. https://doi.org/10.3847/1538-4357/acd8be

Hansen, M. S., Gregersen, S. B. & Rasmussen, J. T. (2022). Bovine milk processing impacts characteristics of extracellular vesicle isolates obtained by size-exclusion chromatography. International Dairy Journal, 127, Article 105212. https://doi.org/10.1016/j.idairyj.2021.105212

López de Las Hazas, M. C., Del Pozo-Acebo, L., Hansen, M. S., Gil-Zamorano, J., Mantilla-Escalante, D. C., Gómez-Coronado, D., Marín, F., Garcia-Ruiz, A., Rasmussen, J. T. & Dávalos, A. (2022). Dietary bovine milk miRNAs transported in extracellular vesicles are partially stable during GI digestion, are bioavailable and reach target tissues but need a minimum dose to impact on gene expression. European Journal of Nutrition, 61(2), 1043-1056. https://doi.org/10.1007/s00394-021-02720-y

Carman, C. V., Nikova, D. N., Sakurai, Y., Shi, J., Novakovic, V. A., Rasmussen, J. T., Lam, W. A. & Gilbert, G. E. (2023). Membrane curvature and PS localize coagulation proteins to filopodia and retraction fibers of endothelial cells. Blood Advances, 7(1), 60-72. https://doi.org/10.1182/bloodadvances.2021006870

Brodal, G. S., Rysgaard, C. M. & Svenning, R. (2023). External Memory Fully Persistent Search Trees. In B. Saha & R. A. Servedio (Eds.), STOC 2023 - Proceedings of the 55th Annual ACM Symposium on Theory of Computing (pp. 1410-1423). Association for Computing Machinery. https://doi.org/10.1145/3564246.3585140

Christensen, H. B. (2023). Teaching Distributed Programming - Revisiting the Broker Pattern. In Proceedings of the 5th European Conference on Software Engineering Education, ECSEE 2023 (pp. 162-168). Association for Computing Machinery. https://doi.org/10.1145/3593663.3593674

Bhattacharya, U., Lamprou, T., Maxwell, A. S., Ordóñez, A., Pisanty, E., Rivera-Dean, J., Stammer, P., Ciappina, M. F., Lewenstein, M. & Tzallas, P. (2023). Strong-laser-field physics, non-classical light states and quantum information science. Reports on Progress in Physics, 86(9), Article 094401. https://doi.org/10.1088/1361-6633/acea31

Marquet, J. C., Freiesleben, T. H., Thomsen, K. J., Murray, A. S., Calligaro, M., Macaire, J. J., Robert, E., Lorblanchet, M., Aubry, T., Bayle, G., Bréhéret, J. G., Camus, H., Chareille, P., Egels, Y., Guillaud, É., Guérin, G., Gautret, P., Liard, M., O’Farrell, M. ... Jaubert, J. (2023). The earliest unambiguous Neanderthal engravings on cave walls: La Roche-Cotard, Loire Valley, France. PLOS ONE, 18(6 ), Article e0286568. https://doi.org/10.1371/journal.pone.0286568

Langeland, J., Christensen, N. F., Vogt, E., Kjær, C., Lindkvist, T. T., Nielsen, S. B. & Kjaergaard, H. G. (2023). Cryogenic Absorption and Emission Spectroscopy of the Oxyluciferin Anion In Vacuo. Journal of Physical Chemistry Letters, 14(25), 5949-5954. https://doi.org/10.1021/acs.jpclett.3c01206

Sidenmark, L., Lystbæk, M. N. & Gellersen, H. (2023). GE-Simulator: An Open-Source Tool for Simulating Real-Time Errors for HMD-based Eye Trackers. In S. N. Spencer (Ed.), Proceedings of the 2023 Symposium on Eye Tracking Research and Applications (pp. 1-6). Article 8 Association for Computing Machinery. https://doi.org/10.1145/3588015.3588417

Westensee, I. N. & Stadler, B. M. (2023). Artificial cells eavesdropping on HepG2 cells. Interface Focus, 13(5), Article 20230007. https://doi.org/10.1098/rsfs.2023.0007

Lesher, C. E., Brown, E., Barfod, G. H., Glessner, J., Stausberg, N., Thy, P., Tegner, C., Salmonsen, L. P. & Nielsen, T. F. D. (2023). Iron Isotope Systematics of the Skaergaard Intrusion and Implications for its Liquid Line of Descent. Journal of Petrology, 64(8), Article egad053. https://doi.org/10.1093/petrology/egad053

C. Freestone, I., Barfod, G. H., Chen, C., A. Larson, K. & Gorin-Rosen, Y. (2023). Glass production at Jalame, Israel: Process, composition and relationship to Roman glass in Europe. Journal of Archaeological Science: Reports, 51, Article 104179. https://doi.org/10.1016/j.jasrep.2023.104179

Asmussen, J. D., Abid, A. R., Sundaralingam, A., Bastian, B., Sishodia, K., De, S., Ltaief, L. B., Krishnan, S. R., Pedersen, H. B. & Mudrich, M. (2023). Secondary ionization of pyrimidine nucleobases and their microhydrated derivatives in helium nanodroplets. Physical Chemistry Chemical Physics, 25(36), 24819-24828. https://doi.org/10.1039/D3CP02879H

Schlafer, S., K. Johnsen, K., Jørgensen, M.-R., Kjærbølling, I., Schramm, A. & Meyer, R. L. (2023). The effect of an enzyme-containing lozenge on dental biofilm accumulation: A clinical pilot study. Abstract from ORCA: 70th Congress of the European Organization for Caries Research, Egmond aan Zee, Netherlands.

Kranabetter, L., Kristensen, H. H., Ghazaryan, A., Schouder, C. A., Chatterley, A. S., Janssen, P., Jensen, F., Zillich, R. E., Lemeshko, M. & Stapelfeldt, H. (2023). Nonadiabatic Laser-Induced Alignment Dynamics of Molecules on a Surface. Physical Review Letters, 131(5), Article 053201. https://doi.org/10.1103/PhysRevLett.131.053201

Hu Fleischhauer, Y., Surale, H. B., Alt, F. & Pfeuffer, K. (2023). Gaze-based Mode-Switching to Enhance Interaction with Menus on Tablets. In S. N. Spencer (Ed.), Proceedings of the 2023 Symposium on Eye Tracking Research and Applications (pp. 1-8). Article 7 Association for Computing Machinery. https://doi.org/10.1145/3588015.3588409

Gao, Q., Grzyb, K., Gamon, L. F., Ogilby, P. R., Pedzinski, T. & Davies, M. J. (2023). The Structure of Model and Peptide Disulfides Markedly Affects their Reactivity and Products formed with Singlet Oxygen. Free Radical Biology and Medicine, 207, 320-329. https://doi.org/10.1016/j.freeradbiomed.2023.08.024

Kameyama, M. & Nawata, S. (2023). Refined large N duality for knots. Journal of Knot Theory and Its Ramifications, 32(6), Article 2041001-1. https://doi.org/10.1142/S0218216520410011

Rikvold, P., Møllebjerg, A., Meyer, R. L. & Schlafer, S. (2023). Multiple-enzyme treatment reduces biofilm formation in a highly acidogenic in vitro model. 57. Abstract from ORCA: 70th Congress of the European Organization for Caries Research, Egmond aan Zee, Netherlands. https://www.orca2023.com/133980/wiki/899680/poster-sessions-and-abstract-booklet

Andersen, M. & Slavensky, A. M. (2023). Descriptors for binding energies at clusters: The case of nanosilicates as models of interstellar dust grains. Journal of Chemical Physics, 159(4), Article 044711. https://doi.org/10.1063/5.0156311

Davison, C. W., Assmann, J. J., Normand, S., Rahbek, C. & Morueta-Holme, N. (2023). Vegetation structure from LiDAR explains the local richness of birds across Denmark. Journal of Animal Ecology, 92(7), 1332-1344. https://doi.org/10.1111/1365-2656.13945

Srinivasan, S. & Tripathi, U. (2023). Optimal Explicit Small-Depth Formulas for the Coin Problem. In B. Saha & R. A. Servedio (Eds.), STOC 2023 - Proceedings of the 55th Annual ACM Symposium on Theory of Computing (pp. 881-894). Association for Computing Machinery. https://doi.org/10.1145/3564246.3585238

Barman, S., Khan, A., Shyam, S. & Sreenivas, K. V. N. (2023). Guaranteeing Envy-Freeness under Generalized Assignment Constraints. EC 2023 - Proceedings of the 24th ACM Conference on Economics and Computation, 242-269. https://doi.org/10.1145/3580507.3597698

Tunç, H. C., Mathur, U., Pavlogiannis, A. & Viswanathan, M. (2023). Sound Dynamic Deadlock Prediction in Linear Time. Proceedings of the ACM on Programming Languages , 7, 1733-1758. https://doi.org/10.1145/3591291

Johns, C. A., Evangelista Belo, J. M., Feit, A. M., Klokmose, C. N. & Pfeuffer, K. (2023). Towards Flexible and Robust User Interface Adaptations With Multiple Objectives. In S. Follmer, J. Han, J. Steimle & N. Henry Riche (Eds.), UIST '23: Proceedings of the 36th Annual ACM Symposium on User Interface Software and Technology Article 108 Association for Computing Machinery. https://doi.org/10.1145/3586183.3606799

Petsinis, P., Pavlogiannis, A. & Karras, P. (2023). Maximizing the Probability of Fixation in the Positional Voter Model. In B. Williams, Y. Chen & J. Neville (Eds.), AAAI-23 Technical Tracks 10 (pp. 12269-12277). Article 190493 AAAI Press.

Johns, C. A., Evangelista Belo, J. M., Pfeuffer, K. & Klokmose, C. N. (2023). Pareto Optimal Layouts for Adaptive Mixed Reality. In CHI 2023 - Extended Abstracts of the 2023 CHI Conference on Human Factors in Computing Systems Article 223 Association for Computing Machinery. https://doi.org/10.1145/3544549.3585732

Ponou, S., Lidin, S. & Mudring, A. V. (2023). Optimization of Chemical Bonding through Defect Formation and Ordering-The Case of Mg₇Pt₄Ge₄. Inorganic Chemistry, 62(22), 8519-8529. https://doi.org/10.1021/acs.inorgchem.2c04312

Heeren, P., Tronsgaard, R., Grundahl, F., Reffert, S., Quirrenbach, A. & Pallé, P. L. (2023). Pyodine: An open, flexible reduction software for iodine-calibrated precise radial velocities. Astronomy and Astrophysics, 674, Article A164. https://doi.org/10.1051/0004-6361/202244441

Hoehler, T. M., Mankel, D. J., Girguis, P. R., McCollom, T. M., Kiang, N. Y. & Jørgensen, B. B. (2023). The metabolic rate of the biosphere and its components. Proceedings of the National Academy of Sciences (PNAS), 120(25), Article e2303764120. https://doi.org/10.1073/pnas.2303764120

Yang, H., Neefjes, I., Tikkanen, V., Kubečka, J., Kurtén, T., Vehkamäki, H. & Reischl, B. (2023). Collision-sticking rates of acid-base clusters in the gas phase determined from atomistic simulation and a novel analytical interacting hard-sphere model. Atmospheric Chemistry and Physics, 23(10), 5993-6009. https://doi.org/10.5194/acp-23-5993-2023

Aalkjær, C. & Wang, T. (2023). The cardiovascular challenges in giraffes. Journal of Muscle Research and Cell Motility, 44(2), 53-60. https://doi.org/10.1007/s10974-022-09626-0

Rao, X., Georges, A. L., Legoupil, M., Watt, C., Pichon-Pharabod, J., Gardner, P. & Birkedal, L. (2023). Iris-Wasm: Robust and Modular Verification of WebAssembly Programs. Proceedings of the ACM on Programming Languages , 7, Article 151. https://doi.org/10.1145/3591265

Davies, J., Lloyd, J., Pearce, C. & Seidenkrantz, M. S. (2023). Distribution of modern benthic foraminiferal assemblages across the Northeast Greenland continental shelf. Marine Micropaleontology, 184, Article 102273. https://doi.org/10.1016/j.marmicro.2023.102273

Asmussen, J. D., Sishodia, K., Bastian, B., Abid, A. R., Ben Ltaief, L., Pedersen, H. B., De, S., Medina, C., Pal, N., Richter, R., Fennel, T., Krishnan, S. & Mudrich, M. (2023). Electron energy loss and angular asymmetry induced by elastic scattering in superfluid helium nanodroplets. Nanoscale, 15(34), 14025-14031. https://doi.org/10.1039/d3nr03295g

Ltaief, L. B., Sishodia, K., Richter, R., Bastian, B., Asmussen, J. D., Mandal, S., Pal, N., Medina, C., Krishnan, S. R., Haeften, K. V. & Mudrich, M. (2024). Spectroscopically resolved resonant interatomic Coulombic decay in photoexcited large He nanodroplets. Physical Review Research , 6(1), Article 013019. https://doi.org/10.1103/PhysRevResearch.6.013019

Bianchi, M., Acharya, S., Dirnberger, F., Klein, J., Pashov, D., Mosina, K., Sofer, Z., Rudenko, A. N., Katsnelson, M. I., Van Schilfgaarde, M., Rösner, M. & Hofmann, P. (2023). Paramagnetic electronic structure of CrSBr: Comparison between ab initio GW theory and angle-resolved photoemission spectroscopy. Physical Review B, 107(23), Article 235107. https://doi.org/10.1103/PhysRevB.107.235107

Euclid Collaboration (2023). Euclid preparation: XXVII. A UV-NIR spectral atlas of compact planetary nebulae for wavelength calibration. Astronomy and Astrophysics, 674, Article A172. https://doi.org/10.1051/0004-6361/202346252

Turu, V., Peña-Monné, J. L., Cunha, P. P., Jalut, G., Buylaert, J. P., Murray, A. S., Bridgland, D., Faurschou-Knudsen, M., Oliva, M., Carrasco, R. M., Ros, X., Turu-Font, L. & Ventura Roca, J. (2023). Glacial-interglacial cycles in the south-central and southeastern Pyrenees since ~180 ka (NE Spain-Andorra-S France). Quaternary Research (United States), 113, 1-28. https://doi.org/10.1017/qua.2022.68

León-Alcaide, L., Christensen, R. S., Keen, D. A., Jordá, J. L., Brotons-Alcázar, I., Forment-Aliaga, A. & Mínguez Espallargas, G. (2023). Meltable, Glass-Forming, Iron Zeolitic Imidazolate Frameworks. Journal of the American Chemical Society, 145(20), 11258-11264. https://doi.org/10.1021/jacs.3c01455

Patra, A. & Ravi, D. (2023). Beyond Honest Majority: The Round Complexity of Fair and Robust Multi-party Computation. Journal of Cryptology, 36(3), Article 30. https://doi.org/10.1007/s00145-023-09468-0

Darooei, R., Nazari, M., Kafieh, R. & Rabbani, H. (2023). Optimal Deep Learning Architecture for Automated Segmentation of Cysts in OCT Images Using X-Let Transforms. Diagnostics, 13(12), Article 1994. https://doi.org/10.3390/diagnostics13121994

Zamora-Luria, J. C., McLachlan, P., Maurya, P. K., Liu, L., Grombacher, D. & Christiansen, A. V. (2023). A feasibility study on time-lapse transient electromagnetic for monitoring groundwater dynamics. Geophysics, 88(5). https://doi.org/10.1190/geo2022-0532.1

Rasmussen, A. P., Wenzel, G., Hornekær, L. & Andersen, L. H. (2023). Gas-phase electronic action absorption spectra of protonated oxygen-functionalized polycyclic aromatic hydrocarbons (OPAHs). Astronomy and Astrophysics, 674, Article A103. https://doi.org/10.1051/0004-6361/202346003

Martínez Villar, M., Germil, M., Pavón-Peláez, C., Tomasco, I. H., Bilde, T., Toft, S. & Albo, M. J. (2023). Lack of Female Preference for Nuptial Gifts May Have Led to Loss of the Male Sexual Trait. Evolutionary Biology, 50(3), 318-331. https://doi.org/10.1007/s11692-023-09606-3

Heiland, M., Connolly, N. M. C., Mamad, O., Nguyen, N. T., Kesavan, J. C., Langa, E., Fanning, K., Sanfeliu, A., Yan, Y., Su, J., Venø, M. T., Costard, L. S., Neubert, V., Engel, T., Hill, T. D. M., Freiman, T. M., Mahesh, A., Tiwari, V. K., Rosenow, F. ... Henshall, D. C. (2023). MicroRNA-335-5p suppresses voltage-gated sodium channel expression and may be a target for seizure control. Proceedings of the National Academy of Sciences (PNAS), 120(30), e2216658120. Article e2216658120. https://doi.org/10.1073/pnas.2216658120

Tschernoster, N., Erger, F., Kohl, S., Reusch, B., Wenzel, A., Walsh, S., Thiele, H., Becker, C., Franitza, M., Bartram, M. P., Kömhoff, M., Schumacher, L., Kukat, C., Borodina, T., Quedenau, C., Nürnberg, P., Rinschen, M. M., Driller, J. H., Pedersen, B. P. ... Altmüller, J. (2023). Long-read sequencing identifies a common transposition haplotype predisposing for CLCNKB deletions. Genome Medicine, 15(1), Article 62. https://doi.org/10.1186/s13073-023-01215-1

Sumanon, P., Balslev, H., Utteridge, T. M. A. & Eiserhardt, W. L. (2023). A species-level phylogenetic framework and infrageneric classification for the genus Maesa (Primulaceae). Taxon, 72(4), 791-810. https://doi.org/10.1002/tax.12991

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