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Department of Biology

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The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Petanidou, T., Godfree, R. C., Song, D. S., Kantsa, A., Dupont, Y. L. & Waser, N. M. (2011). Self-compatibility and plant invasiveness: Comparing species in native and invasive ranges. Perspectives in Plant Ecology, Evolution and Systematics, 14(1), 3-12. https://doi.org/10.1016/j.ppees.2011.08.003

Juul, S., Ho, Y.-P., Koch, J. E., Andersen, F. F., Stougaard, M., Leong, K. W. & Knudsen, B. R. (2011). Detection of Single Enzymatic Events in Rare or Single Cells Using Microfluidics. A C S Nano, 5(10), 8305–8310.

Stougaard, M., Jensen, S. J., Andersen, F. F. & Knudsen, B. R. (2011). Strategies for highly sensitive biomarker detection by Rolling Circle Amplification of signals from nucleic acid composed sensors. Integrative Biology.

Maric, R., Pedersen, F. S., Kjeldbjerg, A. L., Møller-Larsen, A., Bahrami, S., Brudek, T., Petersen, T. & Christensen, T. (2011). Absence of xenotropic murine leukaemia virus-related virus in Danish patients with multiple sclerosis. Retrovirology, 8 (Suppl 1), A213.

Simonsen, M., Maetschke, S. R. & Ragan, M. A. (2012). Automatic selection of reference taxa for protein–protein interaction prediction with phylogenetic profiling. Bioinformatics, 28(6), 851-857. https://doi.org/10.1093/bioinformatics/btr720

Maetschke, S. R., Simonsen, M., Davis, M. J. & Mark, A. (2011). Gene Ontology-driven inference of protein-protein interactions using inducers. Bioinformatics, 28(1), 69-75. https://doi.org/10.1093/bioinformatics/btr610

Christensen, M. S., Lubas, M. S., Kristiansen, M. S., Falkenby, L., Domanski, M., Lykke-Andersen, S., Andersen, J. S., Dziembowski, A. & Jensen, T. H. (2011). The Putative Non-canonical Human Poly(A) polymerase hTrf4-2 is Found in Nuclear Exosome Preparations and interacts with RNA Splicing and snoRNA processing factors. Abstract from RNA 2011, Kyoto, Japan.

Feddersen, A., Dedic, E., Poulsen, E. G., Schmid, M., Van, L. B., Jensen, T. H. & Brodersen, D. (2012). Saccharomyces cerevisiae Ngl3p is an active 3′–5′ exonuclease with a specificity towards poly-A RNA reminiscent of cellular deadenylases. Nucleic Acids Research, 40(2), 837-846. https://doi.org/10.1093/nar/gkr782

Lubas, M. S., Christensen, M. S., Kristiansen, M. S., Falkenby, L., Domanski, M., Lykke-Andersen, S., Andersen, J., Dziembowski, A. & Jensen, T. H. (2011). The Nuclear EXosome Targeting (NEXT) complex - a new player in RNA surveillance in human cells. Abstract from RNA 2011, Kyoto, Japan.

Eiserhardt, W. L., Rohwer, J. G., Russell, S. J., Yesilyurt, J. C. & Schneider, H. (2011). Evidence for radiations of cheilanthoid ferns in the Greater Cape Floristic Region. Taxon, 60(5), 1269-1283.

Oteri, F., Falconi, M., Chillemi, G., Andersen, F. F., Oliveira, C. L. P., Pedersen, J. S., Knudsen, B. R. & Desideri, A. (2011). Simulative Analysis of a Truncated Octahedral DNA Nano-Cage Family Indicates the Single-Stranded Thymidine Linkers as the Major Player for the Conformational Variability. Journal of Physical Chemistry Part C: Nanomaterials and Interfaces, 115(34), 16819-16827.

Nielsen, J. B., Thøgersen, J., Jensen, S. K. & Keiding, S. R. (2011). Vibrational dynamics of deoxyguanosine 5[prime or minute]-monophosphate following UV excitation. Physical Chemistry Chemical Physics, 13(30), 13821-13826. https://doi.org/10.1039/C1CP20918C

Knudsen, B. R., Stougaard, M., Andersen, F. F., Jensen, S. J., Koch, J. E., Ho, Y.-P. & Leong, K. (2011). Enzyme Detection By Microfluidics.

Knudsen, B. R., Stougaard, M., Koch, J. E. & Andersen, F. F. (2011). System for identification of microorganism and detection of infectious disorder.

Demontis, D., Larsen, P. F., Bækgaard, H., Sønderup, M., Hansen, B. K., Nielsen, V. H., Loeschcke, V., Zalewski, A., Zalewska, H. & Pertoldi, C. (2011). Inbreeding affects fecundity of American mink (Neovison vison) in Danish farm mink. Animal Genetics, 42(4), 437-439. https://doi.org/10.1111/j.1365-2052.2010.02155.x

Overgaard, J., Hoffmann, A. A. & Kristensen, T. N. (2011). Assessing population and environmental effects on thermal resistance in Drosophila melanogaster using ecologically relevant assays. Journal of Thermal Biology, 36, 409-416. https://doi.org/10.1016/j.jtherbio.2011.07.005

Loeschcke, V., Kristensen, T. N. & Norry, F. M. (2011). Consistent effects of a major QTL for thermal resistance in field-released Drosophila melanogaster. Journal of Insect Physiology, 57, 1227-1231. https://doi.org/10.1016/j.jinsphys.2011.05.013

Elsaid, R., Sabry, A., Lund, M. S. & Madsen, P. (2011). Genetic analysis of somatic cell score in Danish dairy cattle using ramdom regression test-day model. Livestock Science, 140, 95-102. https://doi.org/10.1016/j.livsci.2011.02.013

Dalby, L., Delany, S., Fox, A. D., Petersen, I. K. & Svenning, J.-C. (2011). Mid-winter European dabbling duck distributions are not linked to species body mass. Abstract from The XVth Nordic Congress of Wildlife Research, Reykjavik, Iceland.

Dalby, L., Söderquist, P., Clausen, P., Christensen, T. K., Elmberg, J., Fox, A. D., Holmqvist, N., Lehikoinen, A., Lindström, Å., Nilsson, L., Pöysä, H., Sigfússon, A. Þ. & Svenning, J.-C. (2011). Current status of the Mallard population in the Nordic countries. Abstract from The XVth Nordic Congress of Wildlife Research, Reykjavik, Iceland.

Bødker, S., Bouvin, N. O., Lutters, W., Wulf, V. & Ciolfi, L. (Eds.) (2011). ECSCW 2011: Proceedings of the 12th European Conference on Computer Supported Cooperative Work, 24-28 September 2011, Aarhus, Denmark. Springer. https://doi.org/10.1007/978-0-85729-913-0

Sevelsted, T. F., Herfort, D. & Skibsted, J. (2013). ¹³C chemical shift anisotropies for carbonate ions in cement minerals and the use of ¹³C, ²⁷Al and ²⁹Si MAS NMR in studies of Portland cement including limestone additions. Cement and Concrete Research, 52, 100 - 111. https://doi.org/10.1016/j.cemconres.2013.05.010

Sevelsted, T. F., Skibsted, J., Jakobsen, H. J. & Herfort, D. (2011). ¹³C MAS NMR spectroscopy in cement science: Characterization of limestone - Portland cements and carbonated C-S-H phases by ¹³C, ²⁷Al and ²⁹Si MAS NMR. In Proceedings of 31st cement and concrete science conference

Nielsen, M. G. (2011). Status over den danske myrefauna og forslag til danske navne. Entomologiske Meddelelser, 79(1), 13-18.

Blank, M., Wollberg, J., Gerlach, F., Reimann, K., Roesner, A., Hankeln, T., Fago, A., Weber, R. E. & Burmester, T. (2011). A Membrane-Bound Vertebrate Globin. PLoS One, 6(9), 1-9. https://doi.org/10.1371/journal.pone.0025292

Aamand, R., Skewes, J., Møller, A., Fago, A. & Roepstorff, A. (2011). Enhancing effects of acetazolamide on neuronal activity correlate with enhanced visual processing ability in humans. Neuropharmacology, 61(5-6), 900-908. https://doi.org/10.1016/j.neuropharm.2011.06.010

Madsen, P. T., Jensen, F. H., Carder, D. & Ridgway, S. (2012). Dolphin whistles: a functional misnomer revealed by heliox breathing. Biology Letters, 8(2), 211-213. https://doi.org/10.1098/rsbl.2011.0701

Cordon, M. S., Wang, T., Speakman, J. & Hoppeler, H. (2011). Call for symposia nominations at the 2013 IUPS Congress. Journal of Experimental Biology. https://doi.org/10.1242/jeb.061028

Toftdal, C. N. (2011). Havbundsobservatorium installeret i Aarhus Bugt. Aarhus Stiftstidende, 3.

Dupont, D. M., Andersen, L. M., Bøtkjær, K. A. & Andreasen, P. A. (2011). Nucleic Acid Aptamers Against Proteases. Current Medicinal Chemistry, 18(27), 4139-4151. https://doi.org/10.2174/092986711797189556

Behrens, M. A., Bøtkjær, K. A., Goswami, S., Oliveira, C. L. P., Jensen, J. K., Schar, C. R., Declerck, P. J., Peterson, C. B., Andreasen, P. A. & Pedersen, J. S. (2011). Activation of the zymogen to urokinase-type plasminogen activator is associated with increased interdomain flexibility. Journal of Molecular Biology, 411(2), 417-29. https://doi.org/10.1016/j.jmb.2011.05.026

Bøtkjær, K. A., Fogh, S., Bekes, E. C., Chen, Z., Blouse, G. E., Jensen, J. M., Mortensen, K., Huang, M., Deryugina, E., Quigley, J. P., Declerck, P. J. & Andreasen, P. A. (2011). Targeting the autolysis loop of urokinase-type plasminogen activator with conformation-specific monoclonal antibodies. Biochemical Journal, 438(1), 39-51. https://doi.org/10.1042/BJ20110129

Conn, E. M., Bøtkjær, K. A., Kupriyanova, T. A., Andreasen, P. A., Deryugina, E. I. & Quigley, J. P. (2009). Comparative analysis of metastasis variants derived from human prostate carcinoma cells: roles in intravasation of VEGF-mediated angiogenesis and uPA-mediated invasion. American Journal of Pathology, 175(4), 1638-52. https://doi.org/10.2353/ajpath.2009.090384

Bekes, E., Deryugina, E., Kuprianova, T., Zajac, E., Bøtkjær, K. A., Andreasen, P. & Quigley, J. (2011). Activation of Pro-uPA is Critical for Initial Escape from the Primary Tumor and Hematogenous Dissemination of Human Carcinoma Cells. NeoPlasia, 13(9), 806-821. http://www.neoplasia.com/abstract.php?msid=4472

Thomsen, H., Thomasen, J. R., Guldbrandtsen, B. & Lund, M. S. (2011). QTL explaining variation in production traits and udder health in the Danish Holstein population. Archiv fuer Tierzucht, 54(4), 348-359.

Abdallah, M., Larsen, N., Grove, J., Nørgaard-Pedersen, B., Thorsen, P., Mortensen, E. L. & Hougaard, D. M. (2013). Amniotic Fluid Inflammatory Cytokines: Potential Markers of Immunologic Dysfunction in Autism Spectrum Disorders. World Journal of Biological Psychiatry, 14(7), 528-538. https://doi.org/10.3109/15622975.2011.639803

Hansen, J. P. (2011). Deling - primtal - kryptografi.

Hansen, J. P. (2011). Mathematics and statistics: Computer science, economics, engineering, genetics, health, physics. In Public Service Review: European Science and Technology 11 (Vol. 11, pp. 145). Public service. http://edition.pagesuite-professional.co.uk/launch.aspx?referral=other&pnum=&refresh=2Dy1o60C5Rf1&EID=6487fe08-235a-4c47-aa72-8ce66128f0db&skip=

Volosniev, A. G., Fedorov, D. V., Jensen, A. S. & Zinner, N. T. (2011). Model independence in two dimensions and polarized cold dipolar molecules. Physical Review Letters, 106(25), PRL 106, 250401. https://doi.org/10.1103/PhysRevLett.106.250401

Jensen, A. S., Fedorov, D. V., de Diego, R., Garrido, E. & Álvarez-Rodríguez, R. (2011). Few-body Decay and Recombination in Nuclear Astrophysics. Few-Body Systems, 50(1-4), 53-59. https://doi.org/10.1007/s00601-010-0136-2

de Diego, R., Garrido, E., Fedorov, D. V. & Jensen, A. S. (2011). Relative Production Rates of ⁶He, ⁹Be, ¹²C in Astrophysical Environments. Few-Body Systems, 50(1-4), 331-333. https://doi.org/10.1007/s00601-010-0162-0

Sørensen, P. K., Fedorov, D. V. & Jensen, A. S. (2011). Three-Body System with Two-Channel Zero-Range Interaction Model of Feshbach Resonance. Few-Body Systems, 50(1-4), 417-421. https://doi.org/10.1007/s00601-010-0142-4

Fedorov, D. V., Armstrong, J. R., Zinner, N. T. & Jensen, A. S. (2011). Weakly Bound States of Polar Molecules in Bilayers. Few-Body Systems, 50(1-4), 395-397. https://doi.org/10.1007/s00601-010-0199-0

Álvarez-Rodríguez, R., Jensen, A. S., Fedorov, D. V. & Garrido, E. (2011). Momentum distributions from three-body decaying ⁹Be and ⁹B resonances. International Journal of Modern Physics E, 20(4), 827-830. https://doi.org/10.1142/S0218301311018770

de Diego, R., Garrido, E., Fedorov, D. V. & Jensen, A. S. (2011). The triple alpha reaction rate and the 2⁺ resonances in ¹²C. Physics Letters B, 695(1-4), 324-328. https://doi.org/10.1016/j.physletb.2010.11.001

Bellotti, F. F., Frederico, T., Yamashita, M. T., Fedorov, D. V., Jensen, A. S. & Zinner, N. T. (2011). Scaling and universality in two dimensions: three-body bound states with short-ranged interactions. Journal of Physics B: Atomic, Molecular and Optical Physics, 44(20), 205302. https://doi.org/10.1088/0953-4075/44/20/205302

Poulsen, S. E. (2011). Høfde 42: Vurdering af specifik ydelse og hydraulisk ledningsevne i testcellerne TC1, TC2 og TC3. http://www.northpestclean.dk/files/Subsites/Northpestclean/Publikationer/NPC/2011-10-06%20H%C3%B8fde%2042%20Vurdering%20af%20den%20specifikke%20ydelse%20og%20hydrauliske%20ledningsevne%20i%20testcellerne%20TC1%20TC2%20og%20TC3.pdf

Branca, A., Paape, T. D., Zhou, P., Briskine, R., Farmer, A. D., Mudge, J., Bharti, A. K., Woodward, J. E., May, G. D., Gentzbittel, L., Ben, C., Denny, R., Sadowsky, M. J., Ronfort, J., Bataillon, T., Young, N. D. & Tiffin, P. (2011). Whole-genome nucleotide diversity, recombination, and linkage disequilibrium in the model legume Medicago truncatula. Proceedings of the National Academy of Sciences (PNAS), 108(42), 864-870. https://doi.org/10.1073/pnas.1104032108

Overgaard, J., Kristensen, T. N., Mitchell, K. A. & Hoffmann, A. A. (2011). Thermal Tolerance in Widespread and Tropical Drosophila Species: Does Phenotypic Plasticity Increase with Latitude? American Naturalist, 178(S1), 80-96. https://doi.org/10.1086/661780

Holm, L.-E. & European cattle genetic diversity and the Econogene (2010). Spatial Trends of Genetic Variation of Domestic Ruminants in Europe. Diversity, 2, 932-945. https://doi.org/10.3390/d2060932

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Anne Kirstine Mehlsen