Department of Biology

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 Department of Biology Research Publications

Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Kragh, G. & Nielsen, K. H. (2023). D4.4 Report on all Workshops. Zenodo. https://doi.org/10.5281/zenodo.8083037
Li, T., Davies, G. R., Nielsen, M., Cunha, M. S. & Lyttle, A. J. (2023). Systematics in asteroseismic modelling: application of a correlated noise model for oscillation frequencies. Monthly Notices of the Royal Astronomical Society, 523(1), 80-90. https://doi.org/10.1093/mnras/stad1406
Phillips, E. & Piotrowski, J. A. (2023). Modelling of till microstructure development during subglacial deformation using ring shear experiments. Quaternary Science Reviews, 312, Article 108168. https://doi.org/10.1016/j.quascirev.2023.108168
Sarkar, S., Bhattacharya, J., Sadhukhan, P., Curcio, D., Dutt, R., Singh, V. K., Bianchi, M., Pariari, A., Roy, S., Mandal, P., Das, T., Hofmann, P., Chakrabarti, A. & Roy Barman, S. (2023). Charge density wave induced nodal lines in LaTe3. Nature Communications, 14(1), Article 3628. https://doi.org/10.1038/s41467-023-39271-1
Menges, L., Giesen, J., Yilmaz, K., Mergia, E., Füchtbauer, A., Füchtbauer, E. M., Koesling, D. & Russwurm, M. (2023). It takes two to tango: cardiac fibroblast-derived NO-induced cGMP enters cardiac myocytes and increases cAMP by inhibiting PDE3. Communications Biology, 6(1), Article 504. https://doi.org/10.1038/s42003-023-04880-5
Petersen, M. G., Iversen, O. S., Krogh, P. G. & Ludvigsen, M. (2004). Aesthetic interaction - A pragmatist's aesthetics of interactive systems. In DIS2004 - Designing Interactive Systems: Across the Spectrum (pp. 269-276)
Sonne, C., Desforges, J.-P., Gustavson, K., Bossi, R., Bonefeld-Jørgensen, E. C., Long, M., Rigét, F. F. & Dietz, R. (2023). Assessment of exposure to perfluorinated industrial substances and risk of immune suppression in Greenland and its global context: a mixed-methods study. The Lancet. Planetary Health, 7(7), e570-e579. https://doi.org/10.1016/S2542-5196(23)00106-7
Flygaard, R. K., Habeck, M. & Nissen, P. (2023). Technical Comment on “Inhibition mechanism of NKCC1 involves the carboxyl terminus and long-range conformational coupling”. Science Advances, 9(28), Article adh0821. https://doi.org/10.1126/sciadv.adh0821
Nguyen, D. D., Jones, N. C., Hoffmann, S. V. & Spanget-Larsen, J. (2023). Excited states of trans-stilbene and 1,4-diphenylbutadiene: Near and vacuum UV polarization spectroscopy. Journal of Molecular Structure, 1293, Article 136206. https://doi.org/10.1016/j.molstruc.2023.136206
Laursen, K. R., Christensen, N. V., Mulder, F. A., Schullehner, J., Hoffmann, H. J., Jensen, A., Møller, P., Loft, S., Olin, A.-C., Rasmussen, B. B., Rosati, B., Strandberg, B., Glasius, M., Bilde, M., Sigsgaard, T. & Climate Chamber Group (2023). Airway and systemic biomarkers of health effects after short-term exposure to indoor ultrafine particles from cooking and candles: A randomized controlled double-blind crossover study among mild asthmatic subjects. Particle and Fibre Toxicology, 20(1), Article 26. https://doi.org/10.1186/s12989-023-00537-7
Ørberg, S. B., Duarte, C. M., Geraldi, N., Sejr, M. K., Wegeberg, S., Hansen, J. L. S. & Krause-Jensen, D. (2023). Prevalent fingerprint of marine macroalgae in arctic surface sediments. Science of the Total Environment, 898, Article 165507. https://doi.org/10.1016/j.scitotenv.2023.165507
Abraham, A. J., Duvall, E. S., le Roux, E., Ganswindt, A., Clauss, M., Doughty, C. E. & Webster, A. B. (2023). Anthropogenic supply of nutrients in a wildlife reserve may compromise conservation success. Biological Conservation, 284, Article 110149. https://doi.org/10.1016/j.biocon.2023.110149
Ait-Itto, F. Z., Martinez, M., Deconinck, J. F. & Bodin, S. (2023). Astronomical calibration of the OAE1b from the Col de Pré-Guittard section (Aptian–Albian), Vocontian Basin, France. Cretaceous Research, 150, Article 105618. https://doi.org/10.1016/j.cretres.2023.105618
Lund-Hansen, L. C., Dahllöf, I. & Nielsen, M. H. (2023). A fjord with a land-terminating glacier: Meltwater, bio-optics, particulate matter, nutrients, phytoplankton species, and primary production in west Greenland. Regional Studies in Marine Science, 64, Article 103054. https://doi.org/10.1016/j.rsma.2023.103054
Cai, R., Yin, R., Li, X., Xie, H. B., Yang, D., Kerminen, V. M., Smith, J. N., Ma, Y., Hao, J., Chen, J., Kulmala, M., Zheng, J., Jiang, J. & Elm, J. (2023). Significant contributions of trimethylamine to sulfuric acid nucleation in polluted environments. npj Climate and Atmospheric Science, 6(1), Article 75. https://doi.org/10.1038/s41612-023-00405-3
Bonnet, G., Hirsch, C., Rosen, D. & Willhalm, D. (2023). Limit theory of sparse random geometric graphs in high dimensions. Stochastic Processes and Their Applications, 163, 203-236. https://doi.org/10.1016/j.spa.2023.06.002
Vanlaer, V., Aerts, C., Bellinger, E. P. & Christensen-Dalsgaard, J. (2023). Feasibility of structure inversions for gravity-mode pulsators. Astronomy and Astrophysics, 675, Article A17. https://doi.org/10.1051/0004-6361/202245597
Rouvière, J. O., Salerno-Kochan, A., Lykke-Andersen, S., Garland, W., Dou, Y., Rathore, O., Molska, E. Š., Wu, G., Schmid, M., Bugai, A., Jakobsen, L., Žumer, K., Cramer, P., Andersen, J. S., Conti, E. & Jensen, T. H. (2023). ARS2 instructs early transcription termination-coupled RNA decay by recruiting ZC3H4 to nascent transcripts. Molecular Cell, 83(13), 2240-2257.e6. https://doi.org/10.1016/j.molcel.2023.05.028
Wili, N. (2023). A primer in pulse EPR-based hyperfine spectroscopy for NMR spectroscopists. Journal of Magnetic Resonance Open, 16-17, Article 100108. https://doi.org/10.1016/j.jmro.2023.100108
García Criado, M., Myers-Smith, I. H., Bjorkman, A. D., Normand, S., Blach-Overgaard, A., Thomas, H. J. D., Eskelinen, A., Happonen, K., Alatalo, J. M., Anadon-Rosell, A., Aubin, I., te Beest, M., Betway-May, K. R., Blok, D., Buras, A., Cerabolini, B. E. L., Christie, K., Cornelissen, J. H. C., Forbes, B. C. ... Virkkala, A. M. (2023). Plant traits poorly predict winner and loser shrub species in a warming tundra biome. Nature Communications, 14(1), Article 3837. https://doi.org/10.1038/s41467-023-39573-4
Rasmussen, M. H., Jaye, C., Fischer, D. & Weidner, T. (2023). A library of calcium mineral reference spectra recorded by parallel imaging using NEXAFS spectromicroscopy. Journal of Electron Spectroscopy and Related Phenomena, 266, Article 147361. https://doi.org/10.1016/j.elspec.2023.147361
Jensen, E. A. M., Riisager, K. & Fynbo, H. O. U. (2023). Extracting clean low-energy spectra from silicon strip detector telescopes around punch through energies. Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment, 1055, Article 168531. https://doi.org/10.1016/j.nima.2023.168531
Mortensen, K. O., Zardbani, F., Haque, M. A., Agustsson, S. Y., Mottin, D., Hofmann, P. & Karras, P. (2023). Marigold: Efficient k-means Clustering in High Dimensions. Proceedings of the VLDB Endowment, 16(7), 1740-1748. https://doi.org/10.14778/3587136.3587147
Beumer, L. T., Schmidt, N. M., Pohle, J., Signer, J., Chimienti, M., Desforges, J. P., Hansen, L. H., Højlund Pedersen, S., Rudd, D. A., Stelvig, M. & van Beest, F. M. (2023). Accounting for behaviour in fine-scale habitat selection: A case study highlighting methodological intricacies. Journal of Animal Ecology, 92(10), 1937-1953. https://doi.org/10.1111/1365-2656.13984
Schmidt, N. M., Kankaanpää, T., Tiusanen, M., Reneerkens, J., Versluijs, T. S. L., Hansen, L. H., Hansen, J., Gerlich, H. S., Høye, T. T., Cirtwill, A. R., Zhemchuzhnikov, M. K., Peña-Aguilera, P. & Roslin, T. (2023). Little directional change in the timing of Arctic spring phenology over the past 25 years. Current Biology, 33(15), 3244-3249.e3. https://doi.org/10.1016/j.cub.2023.06.038
Afshani, P., Cheng, P., Basu Roy, A. & Wei, Z. (2023). On Range Summary Queries. In K. Etessami, U. Feige & G. Puppis (Eds.), 50th International Colloquium on Automata, Languages, and Programming (ICALP 2023) (pp. 7:1-7:17). Article 7 Dagstuhl Publishing. https://doi.org/10.4230/LIPIcs.ICALP.2023.7
Cheng, P. & Afshani, P. (2023). An Optimal Lower Bound for Simplex Range Reporting. In T. Kavitha & K. Mehlhorn (Eds.), 6th Symposium on Simplicity in Algorithms (SOSA 2023) (pp. 272-277). Society for Industrial and Applied Mathematics. https://doi.org/10.1137/1.9781611977585.ch25
Caragiannis, I. & Schwartzbach, N. I. (2023). Outsourcing Adjudication to Strategic Jurors. In E. Elkind (Ed.), Proceedings of the Thirty-Second International Joint Conference on Artificial Intelligence (pp. 2546-2553). International Joint Conferences on Artificial Intelligence. https://doi.org/10.24963/ijcai.2023/283
Landis, D. & Schwartzbach, N. (2023). Stackelberg Attacks on Auctions and Blockchain Transaction Fee Mechanisms. In K. Gal, K. Gal, A. Nowe, G. J. Nalepa, R. Fairstein & R. Radulescu (Eds.), ECAI 2023 - 26th European Conference on Artificial Intelligence, including 12th Conference on Prestigious Applications of Intelligent Systems, PAIS 2023 - Proceedings (pp. 2073-2080). IOS Press. https://doi.org/10.3233/FAIA230501
Day, C., Ton, S. J., Kaussler, C., Hoffmann, D. V. & Skrydstrup, T. (2023). Low Pressure Carbonylation of Benzyl Carbonates and Carbamates for Applications in 13C Isotope Labeling and Catalytic CO2 Reduction. Angewandte Chemie International Edition, 62(35), Article e202308238. https://doi.org/10.1002/anie.202308238
Nielsen, S. D.-H., Liang, N., Rathish, H., Kim, B. J., Lueangsakulthai, J., Koh, J., Qu, Y., Schulz, H.-J. & Dallas, D. C. (2024). Bioactive milk peptides: an updated comprehensive overview and database. Critical Reviews in Food Science and Nutrition, 64(31), 11510-11529. https://doi.org/10.1080/10408398.2023.2240396
Ge, J., Slotsbo, S., Sørensen, J. G. & Holmstrup, M. (2023). Copper-contaminated soil compromises thermal performance in the springtail Folsomia candida (Collembola). Science of the Total Environment, 897, Article 165334. https://doi.org/10.1016/j.scitotenv.2023.165334
Carlson, D. F., Akbulut, S., Rasmussen, J. F., Hestbech, C. S., Andersen, M. H. & Melvad, C. (2023). Compact and modular autonomous surface vehicle for water research: The Naval Operating Research Drone Assessing Climate Change (NORDACC). HardwareX, 15, Article e00453. https://doi.org/10.1016/j.ohx.2023.e00453
Bang-Jensen, F. J. & Ditlevsen, J. (2023). An explicit Plancherel formula for line bundles over the one-sheeted hyperboloid. Journal of Lie Theory, 33(2), 453-476.
Empereur-mot, C., Pedersen, K. B., Capelli, R., Crippa, M., Caruso, C., Perrone, M., Souza, P. C. T., Marrink, S. J. & Pavan, G. M. (2023). Automatic Optimization of Lipid Models in the Martini Force Field Using SwarmCG. Journal of Chemical Information and Modeling, 63(12), 3827–3838. https://doi.org/10.1021/acs.jcim.3c00530
Ghorbani, S., Christine Füchtbauer, A., Møllebjerg, A., Møller Martensen, P., Hvidbjerg Laursen, S., Christian Evar Kraft, D., Kjems, J., Meyer, R. L., Rahimi, K., Foss, M., Füchtbauer, E. M. & Sutherland, D. S. (2023). Protein ligand and nanotopography separately drive the phenotype of mouse embryonic stem cells. Biomaterials, 301, Article 122244. https://doi.org/10.1016/j.biomaterials.2023.122244
Marqversen, F. K. & Zinner, N. T. (2023). Applications and resource reductions in measurement-based variational quantum eigensolvers. Quantum Science and Technology, 8(4), Article 045001. https://doi.org/10.1088/2058-9565/ace2e6
Pastor, A., Holmboe, C. M. H., Pereda, O., Giménez-Grau, P., Baattrup-Pedersen, A. & Riis, T. (2023). Macrophyte removal affects nutrient uptake and metabolism in lowland streams. Aquatic Botany, 189, Article 103694. https://doi.org/10.1016/j.aquabot.2023.103694
Rivas-González, I., Andersen, L. N. & Hobolth, A. (2023). PhaseTypeR: an R package for phase-type distributions in population genetics. The Journal of Open Source Software, 8(82). https://doi.org/10.21105/joss.05054
Lopes-Rodrigues, V., Boxy, P., Sim, E., Park, D. I., Habeck, M., Carbonell, J., Andersson, A., Fernández-Suárez, D., Nissen, P., Nykjær, A. & Kisiswa, L. (2023). AraC interacts with p75NTR transmembrane domain to induce cell death of mature neurons. Cell Death and Disease, 14(7), Article 440. https://doi.org/10.1038/s41419-023-05979-7
Osório, C., Watt, A. & Kisiswa, L. (2023). Editorial: Molecular mechanisms and pathways in cerebellar function. Frontiers in Molecular Neuroscience, 16, Article 1258215. https://doi.org/10.3389/fnmol.2023.1258215
García-Rodríguez, J. L., Korsgaard, U., Ahmadov, U., Jarlstad Olesen, M. T., Dietrich, K.-G., Hansen, E. B., Vissing, S. M., Ulhøi, B. P., Dyrskjøt, L., Sørensen, K. D., Kjems, J., Hager, H. & Kristensen, L. S. (2023). Spatial profiling of circular RNAs in cancer reveals high expression in muscle and stromal cells. Cancer Research, 83(20), 3340–3353. https://doi.org/10.1158/0008-5472.CAN-23-0748
Jaworowski, B., Iversen, M. & Nielsen, A. E. B. (2023). Approximate Hofstadter- and Kapit-Mueller-like parent Hamiltonians for Laughlin states on fractals. Physical Review A, 107(6), Article 063315. https://doi.org/10.1103/PhysRevA.107.063315
Thorsgaard Jensen, I., Janss, L., Radutoiu, S. & Waagepetersen, R. (2023). Compositionally aware estimation of cross-correlations for microbiome data.
Tao, K., Thorsgaard Jensen, I., Zhang, S., Villa Rodríguez, E. D., Blahovska, Z., Salomonsen, C. L., Martyn, A., Björgvinsdóttir, Þ. N., Kelly, S., Janss, L., Glasius, M., Waagepetersen, R. & Radutoiu, S. (2023). Nitrogen source and Nod factor signaling map out the assemblies of Lotus japonicus root bacterial communities.
Holm, E. B., Oldengott, I. M. & Zentarra, S. (2023). Local clustering of relic neutrinos with kinetic field theory. Physics Letters, Section B: Nuclear, Elementary Particle and High-Energy Physics, 844, Article 138073. https://doi.org/10.1016/j.physletb.2023.138073
Johansen, M. I., Rahbek, S. J., Jensen-Fangel, S., Minero, G. A., Jensen, L. K., Larsen, O. H., Erikstrup, L. T., Seefeldt, A. M., Østergaard, L. J., Meyer, R. L. & Jørgensen, N. P. (2023). Fibrinolytic and antibiotic treatment of prosthetic vascular graft infections in a novel rat model. PLoS One, 18(7), Article e0287671. https://doi.org/10.1371/journal.pone.0287671
Maitner, B., Gallagher, R., Svenning, J. C., Tietje, M., Wenk, E. H. & Eiserhardt, W. L. (2023). A global assessment of the Raunkiaeran shortfall in plants: geographic biases in our knowledge of plant traits. New Phytologist, 240(4), 1345-1354. https://doi.org/10.1111/nph.18999
Jensen, B. N., Wang, Y., Friec, A. L., Nabavi, S. . M. . S., Dong, MD., Seliktar, D. & Chen, M. (2023). Wireless electromagnetic neural stimulation patch with anisotropic guidance. npj Flexible Electronics, 7(1), Article 34. https://doi.org/10.1038/s41528-023-00270-3
Knattrup, Y., Kubečka, J., Ayoubi, D. & Elm, J. (2023). Clusterome: A Comprehensive Data Set of Atmospheric Molecular Clusters for Machine Learning Applications. ACS Omega, 8(28), 25155-25164. https://doi.org/10.1021/acsomega.3c02203

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Anne Kirstine Mehlsen