Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Filos-Ratsikas, A., Hansen, K. A., Høgh, K. & Hollender, A. (2024). PPAD-Membership for Problems with Exact Rational Solutions: A General Approach via Convex Optimization. In B. Mohar, I. Shinkar & R. O'Donnell (Eds.), STOC 2024 - Proceedings of the 56th Annual ACM Symposium on Theory of Computing (pp. 1204-1215). Association for Computing Machinery. https://doi.org/10.1145/3618260.3649645

Kühn, M., Berndt, C., Watt, S. F. L., Hornbach, M. J., Krastel, S., Sass, K., Kutterolf, S., Freudenthal, T., Huhn, K., Karstens, J., Schramm, B., Elger, J., Böttner, C. & Klaeschen, D. (2024). Volcanic Flank Collapse, Secondary Sediment Failure and Flow-Transition: Multi-Stage Landslide Emplacement Offshore Montserrat, Lesser Antilles. Geochemistry, Geophysics, Geosystems, 25(6), Article e2024GC011564. https://doi.org/10.1029/2024GC011564

Lagido, C., Nielsen, K. H., Kragh, G., Flohr, P., Bezuidenhout, L., Brinkman, L., Baini, A., Saviane, C., Salnikova, A., Brandstetter-Kunc, A., Consolini, G., Correia, A., Moura, P., Fedeli, M., England, J., Venkataraman, S., Skarvøy, A., Konach, T., Taraj, B. ... Haklay, M. (2024). Open Educational Resources on Open Science and Responsible Research and Innovation (Open RRI). In EDULEARN24 Proceedings: 16th International Conference on Education and New Learning Technologies Palma, Spain. 1-3 July, 2024 (pp. 6745-6751). International Association of Technology, Education and Development (IATED). https://doi.org/10.21125/edulearn.2024.1601

Nielsen, K. H. (2024). Hormoner eller ej. Weekendavisen, Sektion 4 (Ideer), 5.

Nielsen, K. H. (2024). Mennesket ud af landbruget. Weekendavisen, Sektion 4 (Ideer), 5.

Sydenham, M. A. K., Dupont, Y. L., Nielsen, A., Olesen, J. M., Bang Madsen, H., Skrindo, A. B., Rasmussen, C., S. Nowell, M., Venter, Z. S., Hegland, S. J., G. Helle, A., Skoog, D. I. J., Torvanger, M. S., Hanevik, K.-A., Hinderaker, S. E., Paulsen, T., Eldegard, K., Reitan, T. & Rusch, G. (2024). Climatic conditions and landscape diversity predict plant–bee interactions and pollen deposition in bee-pollinated plants. Ecography, 2024(9), Article e07138. https://doi.org/10.1111/ecog.07138

Pedersen, J. B., Maurya, P. K., Kraghede, R., Christiansen, A. V., Nielsen, O. F. & Pedersen, J. K. (2021). Optimized management of point-source polluted sites by using 3D geophysics. In 1st Conference on Hydrogeophysics: Contribution to Exploration and Management of Groundwater, Land-Use and Natural Hazards under a Changing Climate, Held at Near Surface Geoscience Conference and Exhibition 2021, NSG 2021 EAGE Publishing BV. https://doi.org/10.3997/2214-4609.202120174

Christiansen, A. V., Maurya, P. K., Christensen, F. E., Kass, A., Pedersen, J. B., Frederiksen, R. R. & Foged, N. (2021). A new flexible floating, towed transient electromagnetic system for hydrogeological mapping under surface water. In 27th European Meeting of Environmental and Engineering Geophysics, Held at Near Surface Geoscience Conference and Exhibition 2021, NSG 2021 EAGE Publishing BV. https://doi.org/10.3997/2214-4609.202120226

Kellett, R., Rawlinson, Z., Westerhoff, R., Reeves, R., Smith, J., Harper, S., Foged, N., Pedersen, J. B. & Maurya, P. (2021). Mapping a fluvial aquifer in New Zealand using airborne TEM, seismic, and electrical soundings. In 1st Conference on Hydrogeophysics: Contribution to Exploration and Management of Groundwater, Land-Use and Natural Hazards under a Changing Climate, Held at Near Surface Geoscience Conference and Exhibition 2021, NSG 2021 EAGE Publishing BV. https://doi.org/10.3997/2214-4609.202120076

Grombacher, D., Maurya, P. K., Pedersen, J. B., Christensen, F. E. & Kraghede, R. (2022). Aquifer Mapping With A Towed Transient Electromagnetic System: Examples From Togo and Ethiopia. In 28th European Meeting of Environmental and Engineering Geophysics European Association of Geoscientists and Engineers. https://doi.org/10.3997/2214-4609.202220069

Sandersen, P. B. E., Kim, H., Jacobsen, R., Pedersen, J. B. & Hansen, B. (2023). Transport of nitrate-containing groundwater to coastal areas through buried tunnel valleys, Denmark. GEUS Bulletin, 53, Article 8351. https://doi.org/10.34194/geusb.v53.8351

Bording, T., Pedersen, J. B., Auken, E. & Maurya, P. K. (2023). ADVANCEMENTS AND CONSIDERATIONS FOR DEEPER PENETRATION OF TOWED TEM INSTRUMENTS. In Proceedings of the Symposium on the Application of Geophyics to Engineering and Environmental Problems, SAGEEP (Vol. 2023-April)

IDS Collaboration (2024). β decay of the ground state and of a low-lying isomer in ²¹⁶Bi. Physical Review C, 109(6), Article 064321. https://doi.org/10.1103/PhysRevC.109.064321

Pedersen, M. B., Beedholm, K., Hubancheva, A., Koseva, K., Uebel, A. S., Hochradel, K., Madsen, P. T. & Stidsholt, L. (2024). Clutter resilience via auditory stream segregation in echolocating greater mouse-eared bats. The Journal of experimental biology, 227(12). https://doi.org/10.1242/jeb.246889

Amireddy, P., Behera, A. R., Paraashar, M., Srinivasan, S. & Sudan, M. (2024). Local Correction of Linear Functions over the Boolean Cube. In STOC 2024: Proceedings of the 56th Annual ACM Symposium on Theory of Computing (pp. 764-775). Association for Computing Machinery. https://doi.org/10.1145/3618260.3649746

Nielsen, M. R. & Brodersen, D. E. (2024). Structural Variations and Rearrangements in Bacterial Type II Toxin-Antitoxin Systems. In Macromolecular Protein Complexes V (Vol. 104, pp. 245-267). Springer. https://doi.org/10.1007/978-3-031-58843-3_11

Dechant, B., Kattge, J., Pavlick, R., Schneider, F. D., Sabatini, F. M., Moreno-Martínez, Á., Butler, E. E., van Bodegom, P. M., Vallicrosa, H., Kattenborn, T., Boonman, C. C. F., Madani, N., Wright, I. J., Dong, N., Feilhauer, H., Peñuelas, J., Sardans, J., Aguirre-Gutiérrez, J., Reich, P. B. ... Townsend, P. A. (2024). Intercomparison of global foliar trait maps reveals fundamental differences and limitations of upscaling approaches. Remote Sensing of Environment, 311, Article 114276. https://doi.org/10.1016/j.rse.2024.114276

Mousavi-Derazmahalleh, M., Haue, N., Kanstrup, M., Laursen, J. T., Lukehurst, S. S., Kveiborg, J. & Allentoft, M. E. (2024). Far away from home? Ancient DNA shows the presence of bicolored shrew (Crocidura leucodon) in Bronze Age Denmark. Ecology and Evolution, 14(7), Article e11680. https://doi.org/10.1002/ece3.11680

Huang, D., Morrisett, G. & Spitters, B. (2020). Application ofComputable Distributions to the Semantics of Probabilistic Programs. In Foundations of Probabilistic Programming (pp. 75-120). Cambridge University Press. https://doi.org/10.1017/9781108770750.004

Nielsen, K. H. (2024). Nobelprisen går til... 1903. Aarhus Universitetsforlag. 100 Danmarkshistorier Vol. 82

Phillips, M. M., Ashall, C., Brown, P. J., Galbany, L., Tucker, M. A., Burns, C. R., Contreras, C., Hoeflich, P., Hsiao, E. Y., Kumar, S., Morrell, N., Uddin, S. A., Baron, E., Freedman, W. L., Krisciunas, K., Persson, S. E., Piro, A. L., Shappee, B. J., Stritzinger, M. ... Shahbandeh, M. (2024). 1991T-like Supernovae. Astrophysical Journal Supplement Series, 273(1), Article 16. https://doi.org/10.3847/1538-4365/ad4f7e

Hopkins, T., Tuomisto, H., Gómez, I. C. & Sääksjärvi, I. E. (2024). A comparison of the parasitoid wasp species richness of tropical forest sites in Peru and Uganda – subfamily Rhyssinae (Hymenoptera: Ichneumonidae). Peer Community Journal, 4, Article e35. https://doi.org/10.24072/pcjournal.398

Amstrup, A. B., Kovac, H., Käfer, H., Stabentheiner, A. & Sørensen, J. G. (2024). The heat shock response in Polistes spp. brood from differing climates following heat stress. Journal of Insect Physiology, 156, Article 104667. https://doi.org/10.1016/j.jinsphys.2024.104667

Wang, X., Miao, L., Huang, X., Mao, L., Cai, T., Svenning, J. C. & Feng, G. (2024). Diversification in birds is promoted by plant diversity, topographic heterogeneity and stable paleoclimate. Journal of Biogeography, 51(11), 2084-2093. https://doi.org/10.1111/jbi.14974

Ageby, L., Jakathamani, S., Murray, A. S., Jain, M. & Rades, E. F. (2024). Feasibility of rock surface luminescence dating technique for measuring the burial ages of unheated flints. Quaternary Geochronology, 83, Article 101566. https://doi.org/10.1016/j.quageo.2024.101566

Nielsen, R. V., Salimi, M., Andersen, J. E. V., Elm, J., Dantan, A. & Pedersen, H. B. (2024). A new setup for measurements of absolute saturation vapor pressures using a dynamical method: Experimental concept and validation. Review of Scientific Instruments, 95(6), Article 065007. https://doi.org/10.1063/5.0215176

Pastor-López, E. J., Escolà, M., Kisielius, V., Arias, C. A., Carvalho, P. N., Gorito, A. M., Ramos, S., Freitas, V., Guimarães, L., Almeida, C. M. R., Müller, J. A., Küster, E., Kilian, R. M., Diawara, A., Ba, S. & Matamoros, V. (2024). Potential of nature-based solutions to reduce antibiotics, antimicrobial resistance, and pathogens in aquatic ecosystems. a critical review. Science of the Total Environment, 946, Article 174273. https://doi.org/10.1016/j.scitotenv.2024.174273

Rysgaard, S., Mortensen, J., Haxen, M., Gillard, L. C. & Risgaard-Petersen, N. (2024). Summer Hydrography Conditions at Proglacial Fjord Entrances Along East Greenland. Journal of Geophysical Research: Oceans, 129(7), Article e2023JC020665. https://doi.org/10.1029/2023JC020665

McPherson, L., Badger, J., Fertitta, K., Gordanier, M., Nemeth, C. & Bejder, L. (2024). Quantifying the abundance and survival rates of island-associated spinner dolphins using a multi-state open robust design model. Scientific Reports, 14(1), 14764. Article 14764. https://doi.org/10.1038/s41598-024-64220-3

Cuppen, H. M., Linnartz, H. & Ioppolo, S. (2024). Laboratory and Computational Studies of Interstellar Ices. Annual Review of Astronomy and Astrophysics, 62(1), 243–286. https://doi.org/10.1146/annurev-astro-071221-052732

Jensen, I. T., Janss, L., Radutoiu, S. & Waagepetersen, R. (2024). Compositionally aware estimation of crosscorrelations for microbiome data. PLoS One, 19(6), Article e0305032. https://doi.org/10.1371/journal.pone.0305032

Pedersen, A. F., Bayen, S., Liu, L., Dietz, R., Sonne, C., Rosing-Asvid, A., Ferguson, S. H. & McKinney, M. A. (2024). Nontarget and suspect screening reveals the presence of multiple plastic-related compounds in polar bear, killer whale, narwhal and long-finned pilot whale blubber from East Greenland. Environmental Pollution, 357, Article 124417. https://doi.org/10.1016/j.envpol.2024.124417

Jørgensen, A. G., Dupont, D. M., Fjelstrup, S., Bus, C., Hansen, C. B., Benfield, T., Garred, P., Heegaard, P. M. H. & Kjems, J. (2024). Unbiased plasma profiling using pre-selected RNA aptamer pools predicts mortality in COVID-19 and identifies protein risk factors. Molecular Therapy Nucleic Acids, 35(3), Article 102253. https://doi.org/10.1016/j.omtn.2024.102253

Rubio-Pérez, L., Frago, S., Compte, M., Navarro, R., Harwood, S. L., Lázaro-Gorines, R., Gómez-Rosel, M., Hangiu, O., Silva-Pilipich, N., Vanrell, L., Smerdou, C. & Álvarez-Vallina, L. (2024). Characterization of a Trispecific PD-L1 Blocking Antibody That Exhibits EGFR-Conditional 4-1BB Agonist Activity. Antibodies, 13(2), Article 34. https://doi.org/10.3390/antib13020034

Leal, I., Thyrring, J., Flores, A. A. V., Archambault, P., Collin, R., Sejr, M. K., Scrosati, R. A. & Tremblay, R. (2024). Fatty acid composition as a function of latitude in barnacle cyprid larvae. Limnology and Oceanography, 69(7), 1577-1592. https://doi.org/10.1002/lno.12592

Bednarz, A., Rosendal, R. T., Lund, L. M. & Birkedal, V. (2024). Probing G-quadruplex-ligand binding using DNA intrinsic fluorescence. Biochimie, 227(Part A), 61-67. https://doi.org/10.1016/j.biochi.2024.06.009

MORIN, LÉO. (2024). A semiclassical Birkhoff normal form for constant-rank magnetic fields. Analysis and PDE, 17(5), 1593-1532. https://doi.org/10.2140/apde.2024.17.1593

Huang, C., Mathiasen, A., Dean, J., Mottin, D. & Assent, I. (2024). HUNIPU: Efficient Hungarian Algorithm on IPUs. In Proceedings - 2024 IEEE 40th International Conference on Data Engineering Workshops, ICDEW 2024 (pp. 388-394). IEEE. https://doi.org/10.1109/ICDEW61823.2024.00062

Rusbjerg-Weberskov, C. E., Gant, M. S., Chamot-Rooke, J., Nielsen, N. S. & Enghild, J. J. (2024). Development of a top-down MS assay for specific identification of human periostin isoforms. Frontiers in Molecular Biosciences, 11, Article 1399225. https://doi.org/10.3389/fmolb.2024.1399225

Rusbjerg-Weberskov, C. E., Hollensen, A. K., Damgaard, C. K., Løvendorf, M. B., Skov, L., Enghild, J. J. & Nielsen, N. S. (2024). Mapping the Periostin splice isoforms in atopic dermatitis and an in vitro asthma model - A multi-platform analysis using mass spectrometry and RT-qPCR. Biochimica et Biophysica Acta - Proteins and Proteomics, 1872(5), 141031. Article 141031. https://doi.org/10.1016/j.bbapap.2024.141031, https://doi.org/10.1016/j.bbapap.2024.141031

He, W., Xie, Z., Wittig, N. K., Zachariassen, L. F., Andersen, H. J., Birkedal, H., Nielsen, D. S., Hansen, A. K. & Bertram, H. C. S. (2024). The dairy matrix and calcium bioavailability. Abstract from ADSA International Partnership Program Symposium - Dairy Research in Denmark, ADSA Annual Meeting, West Palm Beach, Florida, United States.

Lenoir, J., Svenning, J. C. & Sheffer, M. M. (2024). Latitudinal and Elevational Range Shifts Under Contemporary Climate Change. In Encyclopedia of Biodiversity: Volume 3 (3 ed., Vol. 3, pp. 690-709). Academic Press. https://doi.org/10.1016/B978-0-12-822562-2.00386-8

Guo, W. Y., Čuda, J., Skálová, H., Lambertini, C., Pierce, S., Lučanová, M., Brix, H., Meyerson, L. A. & Pyšek, P. (2024). Climate and genome size shape the intraspecific variation in ecological adaptive strategies of a cosmopolitan grass species. Functional Ecology, 38(9), 2054-2066. https://doi.org/10.1111/1365-2435.14613

Serrano, K., Tedeschi, F., Andersen, S. U. & Scheller, H. V. (2024). Unraveling plant-microbe symbioses using single-cell and spatial transcriptomics. Trends in Plant Science, 29(12), 1356-1367. https://doi.org/10.1016/j.tplants.2024.06.008

Richardson, L., Magneville, C., Grange, L., Shepperson, J., Skov, M., Hoey, A. & Heenan, A. (2024, Jun). Reorganisation following disturbance: multi trait-based methods in R.

Aminimehr, A., Khani, P., Molaei, A., Kazemeini, A. & Cambria, E. (2024). TbExplain: A Text-Based Explanation Method for Scene Classification Models with the Statistical Prediction Correction. In GUIDE-AI '24: Proceedings of the Conference on Governance, Understanding and Integration of Data for Effective and Responsible AI (pp. 54-60). Association for Computing Machinery. https://doi.org/10.1145/3665601.3669841

Challier, A., Thomsen, K. J., Kurbanov, R., Sosin, P., Murray, A., Guérin, G., Meshcheryakova, O., Karayev, A., Khormali, F., Taratunina, N., Utkina, A. & Buylaert, J. P. (2024). A detailed quartz and feldspar luminescence chronology for the Khonako II loess section (Southern Tajikistan). Quaternary Geochronology, 83, Article 101571. https://doi.org/10.1016/j.quageo.2024.101571

Cunha, M. S., Damasceno, Y. C., Amaral, J., Falorca, A., Christensen-Dalsgaard, J. & Avelino, P. P. (2024). Buoyancy glitches in pulsating stars revisited. Astronomy and Astrophysics, 687, Article A100. https://doi.org/10.1051/0004-6361/202348681

Westensee, I. N., de Dios Andres, P., Brodszkij, E., Descours, P. L., Perez-Rodriguez, D., Spinazzola, A., Mookerjee, R. P. & Städler, B. (2024). Engineered Lipids for Intracellular Reactive Oxygen Species Scavenging in Steatotic Hepatocytes. Small, 20(44), Article 2400816. https://doi.org/10.1002/smll.202400816

Noble, J. A., Fraser, H. J., Smith, Z. L., Dartois, E., Boogert, A. C. A., Cuppen, H. M., Dickinson, H. J., Dulieu, F., Egami, E., Erkal, J., Giuliano, B. M., Husquinet, B., Lamberts, T., Maté, B., McClure, M. K., Palumbo, M. E., Shimonishi, T., Sun, F., Bergner, J. B. ... Urso, R. G. (2024). Detection of the elusive dangling OH ice features at ~2.7 μm in Chamaeleon I with JWST NIRCam. Nature Astronomy, 8(9), 1169-1180. https://doi.org/10.1038/s41550-024-02307-7

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