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Department of Biology

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The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Wagner, S. R., Toftegaard, T. S. & Bertelsen, O. W. (2013). Introducing the Adherence Strategy Engineering Framework (ASEF): Support for Developing Technology-based Self-care Solutions. Methods of Information in Medicine, 52(3), 220-230. https://doi.org/10.3414/ME12-01-0027

Christensen, H. B. & Hansen, K. M. (2013). Architectural Slicing: Towards Automatic Harvesting of Architectural Prototypes. In K. Drira (Ed.), Software Architecture : 7th European Conference, ECSA 2013, Montpellier, France, July 1-5, 2013. Proceedings (pp. 316-319 ). Springer VS. https://doi.org/10.1007/978-3-642-39031-9_28

Nielsen, J. B., Thøgersen, J., Jensen, S. K. & Keiding, S. R. (2013). Photo protection of RNA building blocks: Adenosine 5⁰-monophosphate, cytidine 5⁰-monophosphate and cytosine. Chemical Physics Letters, 567, 50-54. https://doi.org/10.1016/j.cplett.2013.03.001

Holm, T. E., Dahl, K., Teilmann, J. & Petersen, I. K., (2013). Screening af BALTOPS 13 øvelses-aktiviteter i relation til Natura 2000 habitatområder, No. 13685, 7 p., Apr 16, 2013. Notat fra DCE - Nationalt Center for Miljø og Energi (2011-2019)

Genes, C., Xuereb, A., Pupillo, G. & Dantan, A. R. (2013). Enhanced optomechanical readout using optical coalescence. Physical Review A, 88(3), Article 033855. https://doi.org/10.1103/PhysRevA.88.033855

Kristensen, T. G., Nielsen, J. & Pedersen, C. N. S. (2013). Methods for Similarity-Based Virtual Screening. Computational and Structural Biotechnology Journal, 5(6). https://doi.org/10.5936/csbj.201302009

Simonsen, M., Christensen, M. H., Thomsen, R. & Pedersen, C. N. S. (2013). GPU-Accelerated High-Accuracy Molecular Docking using Guided Differential Evolution. In S. tsutsui & P. Collet (Eds.), Massively Parallel Evolutionary Computation on GPGPUs Springer Publishing Company.

Thøgersen, J., Nielsen, J. B., Jensen, S. K., Keiding, S. R., Odelius, M., Ogden, T., Réhault, J. & Helbing, J. (2013). The rotation of NO₃− as a probe of molecular ion - water interactions. E P J Web of Conferences, 41, Article 06002. https://doi.org/10.1051/epjconf/20134106002

Kragh, H. (2013, Apr). The rise and fall of cosmical physics: Notes for a history, ca. 1850-1920. http://arxiv.org/abs/1304.3890

Philippsen, B. (2013). Reasons for reservoir effect variability.

Philippsen, B. (2013). The freshwater reservoir effect: impact on ceramic chronologies in Northern Europe. Abstract from Radiocarbon and Archaeology, Ghent, Belgium.

Philippsen, B. (2013). The freshwater reservoir effect: impact on ceramic chronologies in Northern Europe. Poster session presented at Radiocarbon and Archaeology, Ghent, Belgium.

Xuereb, A., Genes, C. & Dantan, A. R. (2013). Collectively-enhanced optomechanical coupling in periodic arrays of scatterers. Physical Review A, 88(5), Article 053803. https://doi.org/10.1103/PhysRevA.88.053803

Høyvik, I.-M. & Jørgensen, P. (2013). Localized orbitals from basis sets augmented with diffuse functions. Journal of Chemical Physics, 138(20), Article 204104. https://doi.org/10.1063/1.4803456

Svendsen, A., Lammich, L., Vad Andersen, J. E., Bechtold, H., Søndergaard, E., Mikkelsen, F. & Pedersen, H. B. (2013). Trapping ions from a fast beam in a radio-frequency ion trap: Exploring the energy exchange with the longitudinal radio-frequency field. Physical Review A, 87(4). https://doi.org/10.1103/PhysRevA.87.043410

Kristensen, K., Enggrob, K. L., King, S. M., Worton, D. R., Platt, S. M., Mortensen, R., Rosenoern, T., Surratt, J. D., Bilde, M., Goldstein, A. H. & Glasius, M. (2013). Formation and occurrence of dimer esters of pinene oxidation products in atmospheric aerosols. Atmospheric Chemistry and Physics, 13(7), 3763-3776. https://doi.org/10.5194/acp-13-3763-2013

Bay, C., Raundrup, K., Nymand, J., Aastrup, P., Krogh, P. H., Lauridsen, T. L., Johansson, L. S., Lund, M., Gavor, Z. & Jørgensen, E. (2012). NUUK BASIC: The BioBasis programme. In L. M. Jensen (Ed.), Nuuk Ecological Research Operations, 5th Annual Report, 2011. (pp. 33-46). Aarhus University, DCE - Danish Centre for Environment and Energy. http://www.nuuk-basic.dk/fileadmin/Resources/DMU/GEM/Nuuk/nye/NERO_2012.pdf

Bratteteig, T., Bødker, K., Dittrich, Y., Mogensen, P. H. & Simonsen, J. (2012). Methods: Organizing Principles and General Guidelines for Participatory Design Projects. In J. Simonsen & T. Robertson (Eds.), Routledge International Handbook of Participatory Design (pp. 117-144). Routledge.

Hansen, T. D., Miltersen, P. B. & Zwick, U. (2013). Strategy Iteration Is Strongly Polynomial for 2-Player Turn-Based Stochastic Games with a Constant Discount Factor. Journal of the ACM, 60(1), Article No. 1 . https://doi.org/10.1145/2432622.2432623

Andersen, J. E., Chekhov, L. O., Penner, R. C., Reidys, C. & Sułkowski, P. (2013). Enumeration of RNA complexes via random matrix theory. Biochemical Society. Transactions, 41(2), 652-655. https://doi.org/10.1042/BST20120270

Kryger, M. B. L., Wohl, B. M., Smith, A. A. A. & Zelikin, A. N. (2013). Macromolecular prodrugs of ribavirin combat side effects and toxicity with no loss of activity of the drug. Chemical Communications, 49(26), 2643-2645. https://doi.org/10.1039/c3cc00315a

Kirkegaard, K., Svane, A. S. P., Hindkjær, J. J., Nielsen, N. C. & Ingerslev, H. J. (2013). Metabolic profiles of spent culture media does not predict pregnancy outcome. Abstract from European Society of Human Reproduction and Embryology 29th annual meeting, London, United Kingdom.

Fransson, T., Coriani, S., Christiansen, O. & Norman, P. (2013). Carbon X-ray absorption spectra of fluoroethenes and acetone: A study at the coupled cluster, density functional, and static-exchange levels of theory. Journal of Chemical Physics, 138(12), Article 124311. https://doi.org/10.1063/1.4795835

Malte, H. (1989). Pressure/flow relations in the interlamellar space of fish gills: theory and application in the rainbow trout. Respiratory Physiology & Neurobiology, 78(2), 229-41.

Malte, H. (1986). Effects of aluminium in hard, acid water on metabolic rate, blood gas tensions and ionic status in the rainbow trout. Journal of Fish Biology, 29(2), 187-198.

Jensen, S. J., Harmsen, C., Nielsen, M. J., Stougaard, M., Leong, K. W., Knudsen, B. R. & Ho, Y.-P. (2013). Single cell enzyme diagnosis on the chip. International Conference on Micro Electro Mechanical Systems, 911 - 914. https://doi.org/10.1109/MEMSYS.2013.6474392

Marcussen, L. B., Jepsen, M. L., Kristoffersen, E. L., Franch, O., Proszek, J., Ho, Y.-P., Stougaard, M. & Knudsen, B. R. (2013). DNA-Based Sensor for Real-Time Measurement of the Enzymatic Activity of Human Topoisomerase I. Sensors, 13(4), 4017-4028. https://doi.org/10.3390/s130404017

Zhang, Y., Ho, Y.-P., Chiu, Y.-L., Chan, H. F., Chlebina, B., Schuhmann, T., You, L. & Leong, K. W. (2013). A programmable microenvironment for cellular studies via microfluidics-generated double emulsions. Biomaterials, 34(19), 4564-72. https://doi.org/10.1016/j.biomaterials.2013.03.002

Huber, D., Chaplin, W. J., Christensen-Dalsgaard, J., Gilliland, R. L., Kjeldsen, H., Buchhave, L. A., Fischer, D. A., Lissauer, J. J., Rowe, J. F., Sanchis-Ojeda, R., Basu, S., Handberg, R., Hekker, S., Howard, A. W., Isaacson, H., Karoff, C., Latham, D. W., Lund, M. N., Lundkvist, M. ... Thompson, S. E. (2013). Fundamental Properties of Kepler Planet-candidate Host Stars using Asteroseismology. Astrophysical Journal, 767(2), 127. https://doi.org/10.1088/0004-637X/767/2/127

Urazimbetova, S. & Kyng, M. (2013). From Many to One: Analysis of Information Models for Patient Centric Telemedicine. Global Telemedicine and eHealth Updates : Knowledge Resources, 6, 7-12. http://www.medetel.eu/download/2013/parallel_sessions/presentation/day3/From_Many_to_One.pdf

Svane, A. M. (2014). Estimation of intrinsic volumes from digital grey-scale images. Journal of Mathematical Imaging and Vision, 49(2), 352-376. https://doi.org/10.1007/s10851-013-0469-9

Osinniy, V., Nylandsted Larsen, A., Dahl, E., Enebakk, E., Søiland, A.-K., Tronstad, R. & Safir, Y. (2012). Gettering improvements of minority-carrier lifetimesin solar grade silicon. Solar Energy Materials & Solar Cells, 101, 123-130. https://doi.org/10.1016/j.solmat.2012.02.027

Bikse, J., Kristiansen, S. M. & Delina, A. (2013). Hydrogeochemistry and CFC dating for investigation of seawater intrusion in groundwater at Liepaja, Latvia. Abstract from 71th Scientific Conference of University of Latvia, Latvia. http://www.lu.lv/zinas/t/17032

Bødker, S. & Christiansen, E. T. (2012). Poetry in motion: appropriation of the world of Apps. In P. Turner & S. Turner (Eds.), Proceedings of the 30th European Conference on Cognitive Ergonomics, ECCE '12 (pp. 78-84). Association for Computing Machinery. https://doi.org/10.1145/2448136.2448152

Spiewanowski, M., Etches, A. & Madsen, L. B. (2013). High-order-harmonic generation from field-distorted orbitals. Physical Review A, 87(4), 043424. https://doi.org/10.1103/PhysRevA.87.043424

Clausen, K. K. (2013). Kystnatur i klimaklemme: Fuglelivet. Abstract from Biodiversitetssymposium 2013, København, Denmark.

Finster, K., Kjeldsen, K. U., Kube, M., Reinhardt, R., Mussmann, M., Amann, R. & Schreiber, L. (2013). Complete genome sequence of Desulfocapsa sulfexigens, a marine deltaproteobacterium specialized in disproportionating inorganic sulfur compounds. Standards in Genomic Sciences, 8, 58-68. https://doi.org/10.4056/sigs.3777412

Iversen, F., Yang, C., Dagnæs-Hansen, F., Schaffert, D. H., Kjems, J. & Gao, S. (2013). Optimized siRNA-PEG Conjugates for Extended Blood Circulation and Reduced Urine Excretion in Mice. Theranostics, 3(3), 201-209. https://doi.org/10.7150/thno.5743

Nielsen, M. B. & Østerby, O. (2013). A Two-Continua Approach to Eulerian Simulation of Water Spray. A C M Transactions on Graphics, 32(4), Article Article No. 67 . https://doi.org/10.1145/2461912.2461918

Wang, X., Sø, L. U., Su, R., Wendt, S., Hald, P., Mamakhel, M. A. H., Yang, C., Huang, Y., Iversen, B. B. & Besenbacher, F. (2014). The influence of crystallite size and crystallinity of anatase nanoparticles on the photo-degradation of phenol. Journal of Catalysis, 310, 100-108. https://doi.org/10.1016/j.jcat.2013.04.022

Andersen, O. Z., Offermanns, V., Sillassen, M. B., Almtoft, K. P., Andersen, I. H., Sørensen, S., Jeppesen, C. S., Kraft, D. C. E., Bøttiger, J., Rasse, M., Kloss, F. & Foss, M. (2013). Accelerated bone ingrowth by local delivery of strontium from surface functionalized titanium implants. Biomaterials, 34(24), 5883-5890. https://doi.org/10.1016/j.biomaterials.2013.04.031

Finster, K. (1987). Om Biologi og Filosofi.

Støchkel, K., Hansen, C. N., Houmøller, J., Nielsen, L. M., Anggara, K., Linares, M., Norman, P., Nogueira, F., Maltsev, O. V., Hintermann, L., Nielsen, S. B., Naumov, P. & Milne, B. F. (2013). On the Influence of Water on the Electronic Structure of Firefly Oxyluciferin Anions from Absorption Spectroscopy of Bare and Monohydrated Ions in Vacuo. Journal of the American Chemical Society, 135(17), 6485-6493. https://doi.org/10.1021/ja311400t

Houmøller, J., Wanko, M., Støchkel, K., Rubio, A. & Nielsen, S. B. (2013). On the effect of a single solvent molecule on the charge-transfer band of a donor-acceptor anion. Journal of the American Chemical Society, 135(18), 6818-6821. https://doi.org/10.1021/ja4025275

Trinh, V. H., Tolstikhin, O. I., Madsen, L. B. & Morishita, T. (2013). First-order correction terms in the weak-field asymptotic theory of tunneling ionization. Physical Review A, 87(4), 043426. https://doi.org/10.1103/PhysRevA.87.043426

Odgaard, B. V. (2013). Reconstructing Past Biodiversity Development. In S. A. Elias (Ed.), The Encyclopedia of Quaternary Science (2 ed., Vol. 3, pp. 816-820). North-Holland.

Johnson, J. A., Lin, Q., Wu, L.-C., Obaidi, N., Olson, Z. L., Reeson, T. C., Chen, Y.-S. & Zhang, J. (2013). A "pillar-free", highly porous metalloporphyrinic framework exhibiting eclipsed porphyrin arrays. Chemical Communications, 49(27), 2828-2830. https://doi.org/10.1039/c3cc00049d

Mattle, D., Sitsel, O., Autzen, H. E., Meloni, G., Gourdon, P. & Nissen, P. (2013). On Allosteric Modulation of P-Type Cu⁺-ATPases. Journal of Molecular Biology, 425(13), 2299-2308. https://doi.org/10.1016/j.jmb.2013.03.008

Nissen, P., Gourdon, P., Liu, X., Pedersen, B. P. & Mattle, D. (2012). CRYSTAL STRUCTURE OF A TYPE IB P-TYPE ATPASE.

Jensen, E. B. V. & Nielsen, L. S. (2000). Inhomogeneous Markov point processes by transformation. Bernoulli, 6(5), 761-782. https://doi.org/10.2307/3318755

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