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Department of Biology

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The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Martinez, C. (2006). On the Cohomology of Brill-Noether Loci over Quot Schemes. (pp. 1-12). arXiv:math.AG/0602491.

Ingstrup, M. (2006). Towards Distributed Declarative Architectural Reflection. Daimi PhD Dissertation No. PD-06-17

Hansen, T. R. (2006). Pervasive Interaction - Designing interactive pervasive systems for complex work environments. Daimi PhD Dissertation No. PD-06-18

Krukow, K. (2006). Towards a Theory of Trust for the Global Ubiquitous Computer. Daimi PhD Dissertation No. PD-06-14

Hansen, K. A. (2006). Constant Width and Constant Depth Computation. Daimi PhD Dissertation No. PD-06-13

Martinez, C. (2006). On the Geometry of the R_d-Quot Scheme and Enumerative Computations. arXiv:math.AG/0604502.

Mosegaard, J. (2006). Cardiac Surgery Simulation. Daimi PhD Dissertation No. PD-06-12

Larsen, S. B. (2006). Pervasive Home Care - Technological support for treatment of diabetic foot ulcers at home. Daimi PhD Dissertation No. PD-06-11 http://www.daimi.au.dk/PD/06/11/PD-06-11.pdf

Kirkegaard, C. (2006). Programming with XML. Daimi PhD Dissertation No. PD-06-10

Gerhardy, P. (2006). Applications of Proof Interpretations. Daimi PhD Dissertation No. PD-06-8

Christensen, A. S. (2006). Something to do with Java. Daimi PhD Dissertation No. PD-06-7

Lambov, B. Z. (2006). Topics in the Theory and Practice of Computable Analysis. Daimi PhD Dissertation No. PD-06-6

Vesterstrøm, J. S. (2006). Heuristic Algorithms in Bioinformatics. Daimi PhD Dissertation No. PD-06-5

Ager, M. S. (2006). Partial Evaluation of String Matchers & Constructions of Abstract Machines. Daimi PhD Dissertation No. PD-06-3

Biernacka, M. (2006). A Derivational Approach to the Operational Semantics of Functional Languages. BRICS. Daimi PhD Dissertation No. PD-06-2

Arge, L., Agarwal, P. K. & Danner, A. (2006). From Point Cloud to GRID DEM: A Scalable Approach. In Proceedings of International Symposium on Spatial Data Handling

Arge, L., Danner, A., Haverkort, H. & Zeh, N. (2006). I/O-Efficient Hierarchical Watershed Decomposition of Grid Terrain Models. In Proceedings of International Symposium on Spatial Data Handling

Arge, L. & Zeh, N. (2006). Simple and Semi-Dynamic Structures for Cache-Oblivious Planar Orthogonal Range Searching. In Proceedings of the twenty-second annual symposium on Computational geometry (pp. 158-166). Association for Computing Machinery. https://doi.org/10.1145/1137856.1137883

Morth, J. P., Sørensen, T. L.-M. & Nissen, P. (2006). Membrane's Eleven: heavy-atom derivatives of membrane-protein crystals. Acta Crystallographica, D62(8), 877-882.

Parmeggiani, A. & Nissen, P. (2006). Elongation factor Tu-targeted antibiotics: four different structures, two mechanisms of action. FEBS Letters, 580(19), 4576-4581.

Parmeggiani, A., Nielsen, R. C. & Nissen, P. (2006). Structural basis of the action of pulvomycin and GE2270 A on elongation factor Tu. Biochemistry, 45(22), 6846-6857.

Weinberg, M. S., Villeneuve, L. M., Ehsani, A., Amarzguioui, M., Aagaard, L., Chen, Z.-X., Riggs, A. D., Rossi, J. J. & Morris, K. V. (2006). The antisense strand of small interfering RNAs directs histone methylation and transcriptional gene silencing in human cells. RNA, 12(2), 256–262. https://doi.org/10.1261/rna.2235106

Croitoru, V., Semrad, K., Prenninger, S., Rajkowitsch, L., Vejen, M., Laursen, B. S., Sperling-Petersen, H. U. & Isaksson, LA. (2006). RNA chaperone activity of translation initiation factor IF1. Biochemie, 88(12), 1875-82.

Sperling-Petersen, H. U. (Ed.) (2006). IMMUNOCHEMISTRY 2006 Course plan=20 Manual for Laboratory Exercises-PP-overheads. BioDesign Publications.

Sperling-Petersen, H. U. & Mortensen, K. K. (Eds.) (2006). Protein Technology Laboratory Exercises in Protein Technology, Manual. BioDesign Publications.

Rasmussen, L. C. V., Mortensen, K. K. & Sperling-Petersen, H. U. (2006). Studies on Initiation of Bacterial Protein Biosynthesis. Poster session presented at International Summer School on "Molecular Basis of Bacterial Virulence andSurvival within Infected Host and in the Environment", Spetses, Grækenland.

Aagaard, L., Amarzguioui, M., Sun, G., Santos, L. C., Ehsani, A., Prydz, H. & Rossi, J. J. (2007). A Facile Lentiviral Vector System for Expression of Doxycycline-Inducible shRNAs: Knockdown of the Pre-miRNA Processing Enzyme Drosha. Molecular Therapy, 15(5), 938-945. https://doi.org/10.1038/sj.mt.6300118

Parmeggiani, A., Krab, I. M., Okamura, S., Nielsen, R. C., Nyborg, J. & Nissen, P. (2006). Structural basis of the action of pulvomycin and GE2270 A on elongation factor Tu. Biochemistry, 45(22), 6846-6857.

Bucur, D. & Bardram, J. (2006). Resource Discovery in Activity-Based Sensor Networks. Paper presented at International Conference on Pervasive Computing Technologies for Healthcare, Austria. https://doi.org/10.1109/PCTHEALTH.2006.361663

Bucur, D. & Bardram, J. (2007). Resource Discovery in Activity-Based Sensor Networks. Mobile Networks and Applications, 12(2-3), 129-142. https://doi.org/10.1007/s11036-007-0015-3

Sætrom, P., Heale, B. S. E., Snøve, O., Aagaard, L., Alluin, J. & Rossi, J. J. (2007). Distance Constraints between microRNA Target Sites Dictate Efficacy and Cooperativity. Nucleic Acids Research (NAR). https://doi.org/10.1093/nar/gkm133

Danvy, O. & Millikin, K. (2006). A Rational Deconstruction of Landin's J Operator. B R I C S Report Series, (RS-06-17). http://www.brics.dk/RS/06/17/BRICS-RS-06-17.pdf

Ernst, E. (2006). Family Genericity. Daimi Reports, (PB-578). http://www.daimi.au.dk/publications/PB/578/PB-578.pdf

Bertelsen, O. W. (2006). Tertiary Artefactness at the Interface. In P. A. Fishwick (Ed.), Aesthetic Computing (1 ed.). The MIT Press.

Bertelsen, O. W. & Zander, P.-O. (2006). Appropriation in the development of information systems for voluntary organizations. In Proceedings of ECIS 2006, Gothenburg, June 2006 (1. ed.)

Bertelsen, O. W. & Zander, P.-O. (2006). Towards a Value Theory of the Interface. In DHRS 2006: Proceedings of the Sixth Danish Human-Computer Interaction Research Symposium, November 15, 2006 (pp. 7-8). Datalogisk Institut, Aahus Universitet.

Mark, B., Peter, W., McCarthy, J. & Bertelsen, O. W. (2006). Workshops: Theory and method for experience centered design. In G. M. Olson & R. Jeffries (Eds.), CHI '06: extended abstracts on Human factors in computing systems CHI '06 (pp. 1691-1695). Association for Computing Machinery. https://doi.org/10.1145/1125451.1125764

Bertelsen, O. W., Petersen, M. G., Brynskov, M., Iversen, O. S., Johansson, M. W. & Dalsgård, P. (Eds.) (2006). DHRS 2006: Proceedings of the Sixth Danish Human-Computer Interaction Research Symposium. Aarhus, Denmark, November 15, 2006. Aarhus Universitet, Datalogisk Institut.

Dittrich, Y. (Ed.), Strand, D. L. (Ed.), Nørbjerg, J. (Ed.), Bertelsen, O. W. (Ed.) & Bleek, W.-G. (2006). IRIS 29 Paradigms Politics Paradoxes: Proceedings of 29th Information Systems Research Seminar in Scandinavia, Elsinore, Denmark, August 12-15, 2006 CD ROM. AIS.

Søndergaard, C. S., Bonde, J., Dagnæs-Hansen, F., Nielsen, J. M., Zachar, V., Holm, M., Hokland, P., Falk, E. & Pedersen, L. (2006). Transplantation of human CD34⁺ cells mobilized from healthy donors to the infarcted heart of athymic nude rats does not lead to long term engraftment of human cells. Poster session presented at International Society for Cellular Therapy, 12th Annual Meeting, Berlin, Germany.

Søndergaard, C. S., Maxwell, D., Hess, D., Weinheimer, C., Rosova, I., Creer, M., Piwnica-Worms, D., Pedersen, L., Kovacs, A. & Nolta, J. (2006). Human ALDH high stem cells from umbilical cord blood home to the heart after IV injection and have minimal therapeutic benefit in an immune deficient mouse model of acute myocardial infarction. Poster session presented at International Society for Stem Cell Research 4th Annual Meeting in Toronto, Toronto, Canada.

Lee, J., Deng, X. & Bogor, R. (2006). A k-Bounded Symbolic Execution for Checking Strong Heap Properties of Open Systems. In Proceedings of Conference on Automated Software Engineering: ASE'06 (pp. 157-166). IEEE Computer Society Press.

Mamdouh, W. & Besenbacher, F. (2007). Scanning probe microscopies beyond imaging: manipulation of molecules and nanostructures. Edited by Paolo Samorì. Small, 3, 512-513. https://doi.org/10.1002/smll.200600532

Fedosov, S., Grissom, C. B., Fedosova, N. U., Moestrup, S. K., Nexø, E. & Petersen, T. E. (2006). Application of a fluorescent Cbl-analoque for analysis of the binding kinetics. A study employing recombinant human transcobalamin and intrinsic factor. FEBS journal, 273, 4742-4753.

Thomsen, E. (2006). Jordens og livets historie. In Naturgeografi: Jorden og mennesket (1 ed., pp. 27-62). Geografforlaget.

Thomsen, E. & Rasmussen, T. L. (2006). Agglutinated foraminifera using coccoliths as building material: Grain handling and wall structure. In Forams 2006 - International Conference on Foraminifra Anuário do Instituto de Geoscièncias, vol.29-1.

Bech, M., Simonsen, J. B., Handke, B., Li, Z. & Møller, P. J. (2006). Copper nucleation on ZnO(1120) in the presence of sulphur. Surface Science 600, 3375-3381.

Domenichini, B., Rizzi, G. A., Krüger, P., Della Negra, M., Li, Z., Petukhov, M., Granozzi, G., Møller, P. J. & Bourgeois, S. (2006). Experimental and theoretical evidence for substitutional molybdenum atoms in the TiO₂(110)subsurface. Physical Review B, 73, 245433.

Valnickova, Z., Thøgersen, I., Skottrup, P., Christensen, T., Højrup, P. & Enghild, J. J. (2006). Post-translational modifications of human thrombin-activatable fibrinolysis inhibitor (TAFI): evidence for a large shift in the isoelectric point and reduced solubility upon activation. Biochemistry, 5(45), 1525-35.

Karring, H., Thøgersen, I., Klintworth, G., Møller-Pedersen, T. & Enghild, J. J. (2006). The human cornea proteome: bioinformatic analyses indicate import of plasma proteins into the cornea. Molecular Vision, (12), 451-60.

Displaying results 8801 to 8850 out of 53660

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Brix, H., Arias, C. A. & del Bubba, M. (2001). Media selection for sustainable phosphorus removal in subsurface flow constructed wetlands. Water Science & Technology, 44(11), 47-54.

Meyer, R. L., Larsen, L. H. & Revsbech, N. P. (2001). Microscale gradients of volatile fatty acids (VFA) in anoxic biofilms studied with a novel microscale biosensor for VFA. Paper presented at International Sympsium for Microbial Ecology.

Elberling, B. & Damgaard, LR. (2001). Microscale measurements of oxygen diffusion and consumption in subaqueous sulfide tailings. Geochimica et Cosmochimica Acta, 65(12), 1897-1905. https://doi.org/10.1016/S0016-7037(01)00574-9

Gustafsson, M., Pepper, AS.-R., Albert, V. A. & Källersjö, M. (2001). Molecular phylogeny of the Barnadesioideae (Asteraceae). Nordic Journal of Botany, 21(2), 149-160.

Barling, J., Arnold, G. L. & Anbar, A. D. (2001). Natural mass-dependent variations in the isotopic composition of molybdenum. Earth and Planetary Science Letters, 193.

Dowe, J. L. & Barfod, A. (2001). New species of Livistona R. Br. (Arecaceae) from north Queensland and Papua New Guinea. Austrobaileya, 6(1), 165-174.

Revsbech, N. P., Andersen, K. & Nielsen, M. (2001). Nitrogen transformations in wastewater studied by the use of microscale biosensors for nitrite and nitrite nitrate. In Abstracts 9th International Symposium on Microbial Ecology (pp. 182)

Hylleberg, J. (2001). Outlook on the occasion of the 11th international TMMP congress and Workshop. Tropical Marine Mollusc Programme (TMMP). Phuket Marine Biological Center Special Publication, 25(1), 16-19.

Schippers, A. & Jørgensen, BB. (2001). Oxidation of pyrite and iron sulfide by manganese dioxide in marine sediments. Geochimica et Cosmochimica Acta, 65(6), 915-922.

Frische, S., Bruno, S., Fago, A., Weber, R. E. & Mozzarelli, A. (2001). Oxygen binding by single red blood cells from the red-eared turtle Trachemys scripta. Journal of Applied Physiology, 90(5), 1679-84.

Arias, C. A., del Bubba, M. & Brix, H. (2001). Phosphorus removal by sands for use as media in subsurface flow constructed reed beds. Water Research, 35(5), 1159-1168. http://www.elsevier.com/locate/watres

Laima, M., Christiansen, C., Emeis, K. & Lund-Hansen, L. C. (2001). Phosphorus transport studies in a coast to basin transect in the SW Baltic Sea. Poster session presented at The Sixth Marine Geological Conference, Hirtshals, Denmark.

Riis, T. (2001). Plant distribution and abundance in relation to physical conditions and location within Danish stream systems. Hydrobiologia, 448, 217-228.

Nielsen, I. (2001). Professor, Dr. H.C. Kai Larsen 75. Nordic Journal of Botany, 21(2), 113-114.

Larsen, K. (2001). Progress in the study of Zingiberaceae for Flora Malesiana. In Proceedings of the Fourth International Flora Malesiana Symposium 1998 (pp. 143-147)

Kjeldsen, K. K., Joulian, C. & Ingvorsen, K. (2001). Recovery of sulfate reduction and survival of sulfate reducing bacteria upon oxygen exposure in activated sludge. In Abstracts. 9th International Symposium on Microbial Ecology (ISME-9). Interactions in the microbial world (pp. 382)

Hedegaard, J., Sperling-Petersen, H. U., Sørensen, H. P. & Mortensen, K. K. (2001). Remarkable conservation of translation initiation factors: IF1/eIF1A and IF2/eIF5B are universally distributed phylogenetic markers. IUBMB Life, 51(5), 321-7. https://doi.org/10.1080/152165401317190842

Brix, H. (2001). Remediation of cadmium and nickel-contaminated fish-farm sludge by clones of Salix and Phragmites: Abstract. Paper presented at COST ACTION 837 WG2 Meeting, Madrid 5 - 7 April. http://lbewww.epfl.ch/cost837/

Gervin, L. & Brix, H. (2001). Removal of nutrients from combined sewer overflows and lake water in a vertical-flow constructed wetland system. Water Science & Technology, 44(11-12), 171-176.

Balslev, H. (2001). Review. Nordic Journal of Botany, 21(4).

de Wit, R., Stal, L. J., Lomstein, B. A., Herbert, R. A., van Gemerden, H., Viaroli, P., Cecherelli, V.-U., Rodrigues-Valera, F., Bartoli, M., Giordani, G., Azzoni, R., Schaub, B., Welsh, T. D., Donelly, A., Cifuentes, A., Antón, J., Finster, K., Nielsen, L. B., Pedersen, A.-GU. ... Heijs, S. K. (2001). ROBUST: The ROle of BUffering capacities in STabilising Coastal lagoon ecosystems. Continental Shelf Research, 21, 2021-2041. http://www.elsevier.com/locate/csr

Randers, E., Erlandsen, EJ., Kristensen, JH., Markussen, S., Pedersen, OL., Danielsen, H. & Jorgensen, PE. (2001). Serum hepatocyte growth factor levels in patients with chronic renal disease - effect of GFR and pathogenesis. Scandinavian Journal of Clinical and Laboratory Investigation. Supplement, 61(8), 615-619.

Toft, G. & Baatrup, E. (2001). Sexual characteristics are altered by 4-tert-octylphenol and 17beta-estradiol in the adult male guppy (Poecilia reticulata). Ecotoxicology and Environmental Safety, 48(1), 76-84. https://doi.org/10.1006/eesa.2000.1985

Lund-Hansen, L. C., Mouritsen, K., Laima, M., Nguyen, L. & Doan, H. (2001). Small scale variability of critical shear stress and effects of benthic diatoms, fluff layer, and sediment properties in a non-tidal coastal environment.

Jørgensen, BB., Weber, A. & Zopfi, J. (2001). Sulfate reduction and anaerobic methane oxidation in Black Sea sediments. Deep-Sea Research Part I: Oceanographic Research Papers, 48(9), 2097-2120.

Weber, A., Riess, W., Wenzhoefer, F. & Jørgensen, BB. (2001). Sulfate reduction in Black Sea sediments: in situ and laboratory radiotracer measurements from the shelf to 2000m depth. Deep-Sea Research Part I: Oceanographic Research Papers, 48(9), 2073-2096.

Nielsen, L. B., Finster, K., Welsh, D. T., Donelly, A., Herbert, R. A., de Wit, R. & Lomstein, B. A. (2001). Sulphate reduction and nitrogen fixation rates associated with roots, rhizomes and sediments from Zostera noltii and Spartina maritima meadows. Environmental Microbiology, 3(1), 63-71.

Guldberg, L. B., Finster, K., Welsh, D. T., Donelly, A., Herbert, R. A., de Wit, R. & Lomstein, B. A. (2001). Sulphate reduction and nitrogen fixation rates associated with roots, rhizomes and sediments from Zostera noltii and Spartina marita meadows. Environmental Microbiology, 3(1), 63-71. https://doi.org/10.1046/j.1462-2920.2001.00160.x

Nielsen, L. B., Finster, K., Welsh, D. T., Donelly, A., Herbert, R. A., De Wit, R. & Lomstein, B. A. A. (2001). Sulphate reduction and nitrogen fixation rates associated with roots, rhizomes and sediments from Zostera noltii and Spartina maritima meadows. Environmental Microbiology, 3(1), 63-71. https://doi.org/10.1046/j.1462-2920.2001.00160.x

Carøe, I., Barfod, A. & Lawesson, J. E. (2001). Temporal dynamics of the ground vegetation in a Danish beech forest. Nordic Journal of Botany, 20(5), 585-597. https://doi.org/10.1111/j.1756-1051.2000.tb01609.x

Brix, H. (2001). The functional roles of macrophytes in different types of constructed wetlands: Abstract. Paper presented at Larnaca, Cyprus 18 - 19 May. http://lbewww.epfl.ch/cost837/

Merrison, J. P., Field, D., Finster, K., Lomstein, B. A., Nørnberg, P., Ramsing, N. B. & Uggerhøj, E. (2001). The Mars Simulation Laboratory, University of Aarhus. (pp. 371-374).

Bilde, T. & Toft, S. (2001). The value of three cereal aphid species as food for a generalist predator. Physiological Entomology, 26, 58-68.

Novak, M., Lever, M. & Valiela, I. (2001). Top-down vs. bottom-up controls of microphytobenthic standing crop: role of mud snails and nitrogen supply in the littoral of Waquoit Bay estuaries. Biological Bulletin, 201, 292-294.

Hylleberg, J. (2001). Translations into English of Lorenz Spengler’s papers on bivalves (1783-1792). Part 2. - 1783: a new genus, which may be called Gastrochaena. Phuket Marine Biological Center. Special Publications, 25(2), 539-546.

Hylleberg, J. & Knudsen, J. (2001). Translations into English of Lorenz Spengler’s papers on bivalves (1783-1792). Part 4. - 1792: the genera Pholas and Teredo. Phuket Marine Biological Center. Special Publications, 25(2), 557-570.

Hylleberg, J. & Knudsen, J. (2001). Translations into English of Lorenz Spengler’s papers on bivalves (1783-1792). Part 6. - 1794: the genus Solen. Phuket Marine Biological Center. Special Publications, 25(2), 585-597.

Hylleberg, J. & Knudsen, J. (2001). Translations into English of Lorenz Spengler’s papers on bivalves (1783-1792). Part 7. - 1798: the genus Tellina. Phuket Marine Biological Center. Special Publications, 25(2), 599-621.

Hylleberg, J., (TRANS.) & Knudsen, J. (2001). Translations into English of Lorenz Spengler’s papers on bivalves (1783-1792). Part 5. - 1793: the genera Chaena and Mya. Phuket Marine Biological Center. Special Publications, 25(2), 571-584.

Balslev, H. & Jaramillo, T. (2001). Two new Myristicaceae from Ecuador. Nordic Journal of Botany, 21, 561-566.

Borchsenius, F., Balslev, H. & Svenning, J. C. (2001). Two new species of Geonoma sect. Taenianthera (Arecaceae) from the western Amazon. In Nordic Journal of Botany (4 ed., Vol. 21, pp. 341-347) https://doi.org/10.1111/j.1756-1051.2001.tb00776.x

Borchsenius, F., Balslev, H. & Svenning, J. C. (2001). Two new species of Geonoma sect. Taenianthera (Arecaceae) from the western Amazon. Nordic Journal of Botany, 21(4), 341-347. https://doi.org/10.1111/j.1756-1051.2001.tb00776.x

Borchsenius, F., Balslev, H. & Svenning, J.-C. (2001). Two new species of Geonoma sect. Taenianthera (Arecaceae) from western Amazon. Nordic Journal of Botany, 21, 341-346.

Lægaard, S. (2001). Validation of Ranunculus ficaria L. ssp. fertilis Clapham ex Lægaard (Ranunculaceae). Nordic Journal of Botany, 20(5), 525-526.

Sørensen, C., Vinther, N., Christansen, C., Bartholdy, J. & Lund-Hansen, L. C. (2001). Vand- og sedimentudveksling over Langli Ebbevvej - Et tidevandsskel i det danske Vadehav.

Jensen, A., Forbes, V. E. & Parker, D. (2001). Variation in Cadmium Uptake Feeding Rate, and Life-History Effects In The Gastropod Potamopyrgus antipodarum: Linking Toxicant Effects On Individuals To The Population Level. Environmental Toxicology and Chemistry, 20(11), 2503-2513.

Balslev, H. (2001). Vascular plants on Volcán Chiles and Páramo del Angel, Ecuador — a preliminary list. In in P. M. Ramsay (ed.) The Ecology of Volcán Chiles: high-altitude ecosystems of the Ecuador-Colombia border. Pebble & Shell, Plymouth (pp. 1-25)

Plejdrup, J. & Lund-Hansen, L. C. (2001). Vertikal vandring af phytoplankton i Aarhus Bugt.

Gregersen, P. & Brix, H. (2001). Zero-discharge of nutrients and water in a willow dominated constructed wetland. Water Science & Technology, 44(11-12), 407-412.

Meyer, R. L., Larsen, L. H. & Revsbech, N. P. (2000). A biosensor for NO₃^-/NO₂^- for analysis in soil, marine environments, and wastewater: Application of electrophoretically mediated analyte transport. Paper presented at Biosensors, San Diego, United States.

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Anne Kirstine Mehlsen