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Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Christensen, M., Crabtree, A., Damm, C. H., Hansen, K. M., Madsen, O. L., Marqvardsen, P., Mogensen, P. H., Sandvad, E., Sloth, L. & Thomsen, M. (1998). The M.A.D Experience: Multiperspective Application Development in Evolutionary Prototyping. In E. Jul (Ed.), ECOOP'98 - Object-Oriented Programming: 12th European Conference Brussels, Belgium, July 20-24, 1998 Proceedings (pp. 13-40). Springer. https://doi.org/10.1007/BFb0054085
Kötzer, S., Jensen, E. B. V. & Baddeley, A. (2005). Geometric identities in stereological particle analysis. Thiele Centre, Institut for Matematiske Fag, Aarhus Universitet.
Büscher, M. & Mogensen, P. H. (1997). Mediating Change: Translation and Mediation in the Context of Bricolage. In T. McMaster, E. Mumford, E. B. Swanson, B. Warboys & D. Wastell (Eds.), Facilitating Technology Transfer through Partnership: Learning from Practice and Research (pp. 76-91). Chapman and Hall.
Grønbæk, K. & Mogensen, P. H. (1994). Specific Cooperative Analysis and Design in General Hypermedia Development. In R. Trigg, S. I. Anderson & E. Dykstra-Erickson (Eds.), Proceedings of the 3rd Participatory Design Conference (pp. 159-171). Computer Professionals for Social Responsibility.
Grønbæk, K., Kyng, M. & Mogensen, P. H. (1992). CSCW Challenges in Large-Scale Technical Projects - a case study. In Proceedings of ACM CSCW’92 Conference on Computer-Supported Cooperative Work (pp. 338-345). Society for Industrial and Applied Mathematics.
Mogensen, P. H. & Trigg, R. (1992). Artifacts as triggers for participatory analysis. In Proceedings of the Participatory Design Conference (PDC) (pp. 55-62)
Bødker, S., Grønbæk, K. & Mogensen, P. H. (2000). Cooperative Design. In A. Kent (Ed.), Encyclopedia of Library and Information Science (Vol. 67, pp. 108-119). Marcel Dekker.
Grønbæk, K., Kyng, M. & Mogensen, P. H. (1997). Toward a Cooperative Experimental System Development Approach. In M. Kyng & L. Mathiassen (Eds.), Computers and Design in Context (pp. 201-238). MIT Press.
Nielsen, H. (2001). Alfred Nobel: The Man, his Will, and his Prizes. In H. Nielsen & K. Nielsen (Eds.), Neighbouring Nobel. The History of Thirteen Danish Nobel Prizes (pp. 21-57). Aarhus Universitetsforlag.
Nielsen, H. & Nielsen, K. (2001). The Physics and Chemistry Prizes - A Survey. In H. Nielsen & K. Nielsen (Eds.), Neighbouring Nobel. The History of Thirteen Danish Nobel Prizes (pp. 244-271). Aarhus Universitetsforlag.
Nielsen, H. & Nielsen, K. (2001). The Physiology or Medicine Prizes - A Survey. In H. Nielsen & K. Nielsen (Eds.), Neighbouring Nobel: The History of Thirteen Danish Nobel Prizes (pp. 373-392). Aarhus Universitetsforlag.
Nielsen, H. (2001). Summary and Conclusions. In H. Nielsen & K. Nielsen (Eds.), Neighbouring Nobel. The History of Thirteen Danish Nobel Prizes (pp. 553-587). Aarhus Universitetsforlag.
Nielsen, H. (2005). Hvorfor fik Einstein først nobelprisen i 1921/22? Kvant: Tidsskrift for Fysik og Astronomi, 16(2), 31-34.
Nielsen, H. & Nielsen, K. (2001). Danmark og Nobelprisen gennem 100 år. Aktuel Naturvidenskab, 33-35.
Houston, B., Nielsen, M. B., Batty, C., Nilsson, O. & Museth, K. (2006). Hierarchical RLE Level Set: A Compact and Versatile Deformable Surface Representation. A C M Transactions on Graphics, 25(1), 151-175.
Bouvin, N. O., Brodersen, A. C., Hansen, F. A., Iversen, O. S. & Nørregaard, P. (2005). Tools of Contextualization: Extending the Classroom to the Field. In Proceedings of the 2005 conference on Interaction design and children (pp. 24-31). Association for Computing Machinery. https://doi.org/10.1145/1109540.1109544
Houston, B., Nielsen, M. B., Nilsson, O., Museth, K. & Batty, C. (2005). Gigantic Deformable Surfaces. In Ikke angivet Society for Industrial and Applied Mathematics.
Hansen, F. A., Christensen, B. G. & Bouvin, N. O. (2005). RSS as a distribution medium for geo-spatial hypermedia. In Proceedings of the sixteenth ACM conference on Hypertext and hypermedia (pp. 254-256). Association for Computing Machinery. https://doi.org/10.1145/1083356.1083410
Barndorff-Nielsen, O. E. & Schmiegel, J. (2005). Ambit processes; with applications to turbulence and tumour growth. Thiele Centre, Institut for Matematiske Fag, Aarhus Universitet.
Andersen, H., Barker, P. & Chen, X. (2006). The Cognitive Structure of Scientific Revolutions. Cambridge University Press.
Mendling, J., Lassen, K. B. & Zdun, U. (2006). Transformation Strategies between Block-Oriented and Graph-Oriented Process Modelling Languages. In 3rd GI Workshop XML4BPM - XML Integration and Transformation for Business Process Management at MKWI 2006
Momme, P., Tegner, C., Brooks, C. K. & Keays, R. R. (2006). Two melting regimes during Paleogene flood basalt generation in East Greenland: combined REE and PGE modelling. Contributions to Mineralogy and Petrology, 151, 88-100.
Brodersen, A. C. & Iversen, O. S. (2005). eCell: Spatial IT Design for Group Collaboration in School Environments. In GROUP 05 (pp. 227-235). Society for Industrial and Applied Mathematics.
Brodersen, A. C., Christensen, B. G., Grønbæk, K., Dindler, C. & Sundararajah, B. (2005). eBag: a Ubiquitous Web Infrastructure for Nomadic Learning. In Proceedings of the 14th International World Wide Web Conference (pp. 298-306). Association for Computing Machinery. https://doi.org/10.1145/1060745.1060791
Kjaer, C. R. & Drewsen, M. (2005). Nobelprisen i Fysik: Lys over optikken. Aktuel Naturvidenskab, (5), 18-19.
Dupont, J. L. & Kamber, F. W. (2005). Gerbes, Simplicial Forms and Invariants for Families of Foliated Bundles. Communications in Mathematical Physics, 253-282.
Lomstein, B. A., Guldberg, L. B. & Hansen, J. (2006). Decomposition of Mytilus edulis: The effect on sediment nitrogen and carbon cycling. Journal of Experimental Marine Biology and Ecology, 329, 251-264.
Andersen, H. (2009). Unexpected discoveries, graded structures, and the difference between acceptance and neglect. In J. Meheus & T. Nickles (Eds.), Models of Discovery and Creativity (pp. 3-28). Springer.
Andersen, P. B., Bennedsen, J., Brandorff, S., Caspersen, M. E. & Mosegaard, J. (2003). Teaching Programming to Liberal Arts Students: a Narrative Media Approach. In Proceedings of the 8th annual conference on Innovation and technology in computer science education (8 ed., pp. 109-113). Association for Computing Machinery. https://doi.org/10.1145/961511.961543
Blæsild, P. & Kristensen, L. B. (2005). Spil matematik. Matematiklærerforeningen.
Mosegaard, J. & Bennedsen, J. (2006). A Framework for Narration and Learning in Educational Multimedia. In D. Lassner & C. McNaught (Eds.), World Conference on Educational Multimedia, Hypermedia and Telecommunications 2003 (Vol. 2003, Issue 1, pp. 99-106). ED-MEDIA.
Damgård, I. B., Cramer, R. & Ishai, Y. (2005). Share Conversion, Pseudorandom Secret-Sharing and Applications to Secure Computation. In J. Killian (Ed.), Theory of Cryptography: Second Theory of Cryptography Conference, TCC 2005, Cambridge, MA, USA, February 10-12, 2005. Proceedings (pp. 342-362). Springer. https://doi.org/10.1007/978-3-540-30576-7_19
Damgård, I. B. & Dupont, K. (2005). Efficient Threshold RSA Signatures with General Moduli and no Extra Assumptions. In S. Vaudenay (Ed.), Public Key Cryptography - PKC 2005: 8th International Workshop on Theory and Practice in Public Key Cryptography, Les Diablerets, Switzerland, January 23-26, 2005. Proceedings (pp. 346-361). Springer. https://doi.org/10.1007/978-3-540-30580-4_24
Damgård, I. B., Salvail, L. & Pedersen, T. B. (2005). A Quantum Cipher with Near Optimal Key-Recycling. In V. Shoup (Ed.), Advances in Cryptology - CRYPTO 2005: 25th Annual International Cryptology Conference, Santa Barbara, California, USA, August 14-18, 2005. Proceedings (pp. 494-510). Springer. https://doi.org/10.1007/11535218_30
Damgård, I. B. & Ishai, Y. (2005). Constant-Round Multiparty Computation Using a Black-Box Pseudorandom Generator. In V. Shoup (Ed.), Advances in Cryptology - CRYPTO 2005: 25th Annual International Cryptology Conference, Santa Barbara, California, USA, August 14-18, 2005. Proceedings (pp. 378-394). Springer. https://doi.org/10.1007/11535218_23
Dupont, J. L. (2005). Publicering. Weekendavisen.
Andersen, E. S. & Kjems, J. (2006). Virus er naturens selviske nanorobotter. In A.-L. S. Petersen & F. Besenbacher (Eds.), Nanoteknologi: 12 historier om den nyeste danske forskning (pp. 42-45).

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Barfod, A. S., Wind, P., Damgaard, C. & Hansen, M. DD. (2014). Ukrudt. In M. D. D. Hansen & N. Seirup (Eds.), Natur og Museum (sept 2014 ed., Vol. 3, pp. 3-35). Naturhistorisk Museum.
Amersek, I., Hercog, A., Arias, C. A., Istenic, D. & Bulc, T. (2014). Use of vertical flow treatment wetlands in Slovenia. In 14th IWA International Conference on Wetland System for Pollution Control (ICWS2014): Conference proceedings (pp. 689 - 692). International Water Association - IWA.
Li, S., Besenbacher, S., Li, Y., Kristiansen, K., Grarup, N., Albrechtsen, A., Sparsø, T. H., Korneliussen, T. S., Hansen, T., Wang, J., Nielsen, R., Pedersen, O., Bolund, L. & Schierup, M. H. (2014). Variation and association to diabetes in 2000 full mtDNA sequences mined from an exome study in a Danish population. European Journal of Human Genetics. https://doi.org/10.1038/ejhg.2013.282
De Brabandere, L., Canfield, D. E., Dalsgaard, T., E. Friedrich, G., Revsbech, N. P., Ulloa, O. & Thamdrup, B. (2014). Vertical partitioning of nitrogen-loss processes across the oxic-anoxic interface of an oceanic oxygen minimum zone. Environmental Microbiology, 16(10), 3041-3054. https://doi.org/10.1111/1462-2920.12255
Wang, T. & Kjærgaard, P. C. (2014). Vi er mere end vores gener. Weekendavisen, Ideer, 12-13.
Kuhn, J. H., Bào, Y., Bavari, S., Becker, S., Bradfute, S., Brauburger, K., Rodney Brister, J., Bukreyev, A. A., Caì, Y., Chandran, K., Davey, R. A., Dolnik, O., Dye, J. M., Enterlein, S., Gonzalez, J.-P., Formenty, P., Freiberg, A. N., Hensley, L. E., Hoenen, T. ... Nichol, S. T. (2014). Virus nomenclature below the species level: a standardized nomenclature for filovirus strains and variants rescued from cDNA. Archives of Virology, 159(5), 1229-1237. https://doi.org/10.1007/s00705-013-1877-2
Merow, C., Smith, M. J., Edwards Jr., T. C., Guisan, A., McMahon, S. M., Normand, S., Thuiller, W., Wüest, R. O., Zimmermann, N. E. & Elith, J. (2014). What do we gain from simplicity versus complexity in species distribution models? Ecography, 37(12), 1267-1281. https://doi.org/10.1111/ecog.00845
Jarvis, E. D., Mirarab, S., Aberer, A. J., Li, B., Houde, P., Li, C., Ho, S. Y. W., Faircloth, B. C., Nabholz, B., Howard, J. T., Suh, A., Weber, C. C., da Fonseca, R. R., Li, J., Zhang, F., Li, H., Zhou, L., Narula, N., Liu, L. ... Zhang, G. (2014). Whole-genome analyses resolve early branches in the tree of life of modern birds. Science, 346(6215), 1320-31. https://doi.org/10.1126/science.1253451
Pirra, A., Oliveira, A., Carvalho, P. & Alves, J. (2014). Winery effluents treatment in Portugal: an uncomfortable overview. Abstract from International Congress on Water, Waste and Energy Management, Porto, Portugal.
Junsongduang, A., Balslev, H., Jampeetong, A., Inta, A. & Wangpakapattanawong, P. (2014). Woody plant diversity in sacred forests and fallows in Chiang Mai, Thailand. Chiang Mai Journal of Science, 41(5.1), 1132-1149. http://it.science.cmu.ac.th/ejournal/journalDetail.php?journal_id=5310
Dodds, W., Collins, SM., Hamilton, S., Tank, J., Johnson, S., Webster, J., Simon, K., Whiles, M., Rantala, H., McDowell, WH., Peterson, S., Riis, T., Crenshaw, C., Thomas, S., Kristensen, P. B., Cheever, BM., Flecker, AS., Griffith, NA., Crowl, T. ... El-Sabaawi, R. (2014). You are not always what we think you eat: selective assimilation across multiple whole-stream isotopic tracer studies. Ecology, 95, 2757-2767. https://doi.org/10.1890/13-2276.1
Dodds, W. K., Collins, SM., Hamilton, S., Tank, J., Riis, T. & Johnson, S. (2014). You are not always what we think you eat: selective assimilation across multiple whole-stream isotopic tracer studies. Abstract from Joint Aquatic Sciences Meeting, Portland, Oregon, United States.
Olesen, J. M. (2013). 300 år og et kedeligt sexliv. Weekendavisen, (e3d5fcb8), 10.
Ramsing, N. B., Gundersen, J., Hilligsøe, K. M., Berntsen, J. & Agerholm, I. E. (2013). Adaptive embryo selection criteria optimized through iterative customization and collaboration. (Patent No. WO 2013004239 A1).
Chapman, B. B., Eriksen, A., Baktoft, H., Brodersen, J., Nilsson, P. A., Hulthen, K., Brönmark, C., Hansson, L.-A., Grønkjær, P. & Skov, C. (2013). A foraging cost of migration for a partially migratory cyprinid fish. PLoS One, 8(5), e61223. https://doi.org/10.1371/journal.pone.0061223
Janussen, D., Brandao, S., Cedhagen, T., Hauquier, F., Havermans, C., Jörger, K., Lejzerowicz, F., Meyer-Löbbecke, A., Schnurr, S., Schwabe, E., Vortkamp, M., Würzberg, L., Zinkann, A. C. & Brandt, A. (2013). Agassiz trawl (AGT) deployments. In Berichte zur Polar- und Meeresforschung (pp. 115-117)
Normand, S., Randin, C., Ohlemüller, R., Bay, C., Høye, T. T., Kjær, E. D., Körner, C., Lischke, H., Maiorano, L., Paulsen, J., Pearman, P. B., Psomas, A., Treier, U., Zimmermann, N. E. & Svenning, J.-C. (2013). A greener Greenland? Climatic potential and long-term constraints on future expansion of trees and shrubs. Philosophical Transactions of the Royal Society B: Biological Sciences, 368(1624), Article 20120479. https://doi.org/10.1098/rstb.2012.0479
Jørgensen, B. B., Kjær, A., Knutz, P. & Seidenkrantz, M.-S. (2013). A letter from Denmark. ECORD Newsletter European Consortium for Ocean Research Drilling, (20), 18. http://www.ecord.org/pub/nl.html
Teilmann, J., Wisniewska, D. M., Hermannsen, L., Dietz, R., Johnson, M., Miller, L., Siebert, U. & Madsen, P. P. T. (2013). Anthropogenic noise exposure on harbor porpoises – deployment of acoustic tags on wild and captive animals. Poster session presented at 20th Biennial Conference on The Biology of Marine Mammals, Dunedin, New Zealand.
Barfod, A. S. & Dransfield, J. (2013). Arecaceae for Flora of Thailand. In Flora of Thailand (pp. 323-498). Department of National Parks, Wildlife and Plant Conservation.
Wang, T. (2013). Arv - Mendel og arvelighedslovene. In H. Kragh, M. A. Skydsgaard & T. Wang (Eds.), 50 opdagelser - højdepunkter i naturvidenskaben (pp. 137-141). Aarhus Universitetsforlag.
Blonder, B., Nogués-Bravo, D., Rahbek, C., Enquist, B. J., Boyle, B., Donoghue II, J. C., Condit, R., Peet, R. K., Dolins, S., Schildhauer, M., Theirs, B., McGill, B. J., Jørgensen, P. M., Narro, M., Regetz, J., Violle, C., Simova, I., Sloat, L., Piel, W. ... Engemann-Jensen, K. (2013). Assembly of plant communities in climate space. Poster session presented at International Biogeography Society, 6th Biennal Meeting, Miami, Florida, United States.
Madsen, P. P. T. (2013). At lytte uden ører. Weekendavisen, (6), 11-11.
Scott, C., Planavsky, N. J., Dupont, C. L., Kendall, B., Gill, B. C., Robbins, L. J., Husband, K. F., Arnold, G. L., Wing, B. A., Poulton, S. W., Bekker, A., Anbar, A. D., Konhauser, K. D. & Lyons, T. W. (2013). Bioavailability of zinc in marine systems through time. Nature Geoscience, 6(2). https://doi.org/10.1038/ngeo1679
Levi, P. S., Tank, J. L., Tiegs, S. D., Chaloner, D. T. & Lamberti, G. A. (2013). Biogeochemical transformation of a nutrient subsidy: Salmon, streams, and nitrification. Biogeochemistry, 113(1-3), 643-655. https://doi.org/10.1007/s10533-012-9794-0