Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Ling, M. L., Marshall, I. P. G., Rosati, B., Schreiber, L., Boesen, T., Finster, K. & Šantl-Temkiv, T. (2021). Properties relevant to atmospheric dispersal of the ice-nucleation active Pseudomonas syringae strain R10.79 isolated from rain water. Aerobiologia, 37(2), 225-241. https://doi.org/10.1007/s10453-020-09682-4

Abrego, N., Roslin, T., Huotari, T., Ji, Y., Schmidt, N. M., Wang, J., Yu, D. W. & Ovaskainen, O. (2021). Accounting for species interactions is necessary for predicting how arctic arthropod communities respond to climate change. Ecography, 44(6), 885-896. https://doi.org/10.1111/ecog.05547

Pelck, J. S., Maia, R. P., Pinheiro, H. P. & Labouriau, R. (2021). A Multivariate Methodology for Analysing Students' Performance Using Register Data. ArXiv.

Damsgaard, A., Goren, L. & Suckale, J. (2020). Water pressure fluctuations control variability in sediment flux and slip dynamics beneath glaciers and ice streams. Communications Earth & Environment, 1(1), Article 66. https://doi.org/10.1038/s43247-020-00074-7

Damsgaard, A., Sergienko, O. & Adcroft, A. (2021). The Effects of Ice Floe-Floe Interactions on Pressure Ridging in Sea Ice. Journal of Advances in Modeling Earth Systems, 13(7), Article e2020MS002336. https://doi.org/10.1029/2020MS002336

Damsgaard, A., Suckale, J., Li, D., Kasmalkar, I., Amundson, J., Goren, L. & Cabrales-Vargas, A. (2019). A new continuum model for subglacial till based on granular rheology. Abstract from International Glaciological Society Symposium on Glacial Erosion and Sedimentation, Madison, United States.

Kasmalkar, I., Damsgaard, A., Goren, L., Suckale, J. & Cabrales-Vargas, A. (2019). Subglacial sediment beds resist fast ice flow by facilitating meltwater drainage. Abstract from AGU Fall Meeting 2019, San Francisco, United States.

Suckale, J., Kasmalkar, I., Damsgaard, A., Mantelli, E., Cabrales-Vargas, A., Li, D., Goren, L. & Elsworth, C. (2019). Progress on understanding the subglacial hydrology over till beds with ramifications for ice dynamics and sediment transport. Abstract from International Glaciological Society Symposium on Glacial Erosion and Sedimentation, Madison, United States.

Schweiger, A. H., Irl, S. D. H., Svenning, J.-C. & Higgins, S. I. (2020). Dynamic management needs for long-lived, sporadically recruiting plant species in human-dominated landscapes. Plants People Planet, 2(3), 186-200. https://doi.org/10.1002/ppp3.10096

Damsgaard, A., Suckale, J. & Goren, L. (2020). The role of granular mechanics and porous flow for ice sheet behavior in a changing climate. Abstract from 7th European Seminar on Computing (ESCO) 2020, Pilsen, Czech Republic.

Riber, A. B., Herskin, M. S., Foldager, L., Berenjian, A., Sandercock, D., Murrell, J. & Tahamtani, F. (2021). Are changes in behavior of fast-growing broilers with slight gait impairment (GS0-2) related to pain? Poultry Science, 100(3), Article 100948. https://doi.org/10.1016/j.psj.2020.12.045

Mathur, U., Pavlogiannis, A. & Viswanathan, M. (2021). Optimal Prediction of Synchronization-Preserving Races. Proceedings of the ACM on Programming Languages , 5(POPL), Article 36. https://doi.org/10.1145/3434317

Mathiasen, A. A. & Pavlogiannis, A. (2021). The Fine-Grained and Parallel Complexity of Andersen’s Pointer Analysis. Proceedings of the ACM on Programming Languages , 5(POPL), Article 34. https://doi.org/10.1145/3434315

Annenkov, D., Milo, M., Nielsen, J. B. & Spitters, B. (2021). Extracting smart contracts tested and verified in Coq. In C. Hritcu & A. Popescu (Eds.), CPP 2021 - Proceedings of the 10th ACM SIGPLAN International Conference on Certified Programs and Proofs, co-located with POPL 2021 (pp. 105-121). Association for Computing Machinery. https://doi.org/10.1145/3437992.3439934

Kulik, T., Boudjadar, J. & Aranha, D. F. (2021). Formally Verified Credentials Management for Industrial Control Systems. In Proceedings - 2021 IEEE/ACM 9th International Conference on Formal Methods in Software Engineering, FormaliSE 2021: 9th IEEE/ACM International Conference on Formal Methods in Software Engineering (pp. 75-85). IEEE. https://doi.org/10.1109/FormaliSE52586.2021.00014

Audet, J., Olsen, T. M., Elsborg, T., Baattrup-Pedersen, A. & Riis, T. (2021). Influence of plant habitats on denitrification in lowland agricultural streams. Journal of Environmental Management, 286, Article 112193. https://doi.org/10.1016/j.jenvman.2021.112193

Nazipi, S., Vangkilde, S., Busck, M. M., Lund, D. K., Marshall, I. P. G., Bilde, T., Lund, M. B. & Schramm, A. (2021). An antimicrobial Staphylococcus sciuri with broad temperature and salt spectrum isolated from the surface of the African social spider, Stegodyphus dumicola. Antonie van Leeuwenhoek: Journal of Microbiology, 114(3), 325–335. https://doi.org/10.1007/s10482-021-01526-6

Holding, J. M., Brown, K., Huntington, H. P., Bhatt, U. S., Carmack, E. C., Wassmann, P. & Quesada, C. M. D. (2020). An Arctic Marine Ecosystem Conceptual Model: The Interactions Matrix Revealed. Poster session presented at Ocean Sciences Meeting 2020, San Diego, California, United States. https://agu.confex.com/agu/osm20/meetingapp.cgi/Paper/652009

Darabi, H., Bangsgaard, P., Arranz-Otaegui, A., Ahadi, G. & Olsen, J. (2021). Early Neolithic occupation of the lowlands of south-western Iran: New evidence from Tapeh Mahtaj. Antiquity, 95(379), 27-44. https://doi.org/10.15184/aqy.2020.215

Focht, D., Neumann, C., Lyons, J., Eguskiza Bilbao, A., Blunck, R., Malinauskaite, L., Schwarz, I. O., Javitch, J. A., Quick, M. & Nissen, P. (2021). A non-helical region in transmembrane helix 6 of hydrophobic amino acid transporter MhsT mediates substrate recognition. EMBO Journal, 40(1), Article e105164. https://doi.org/10.15252/embj.2020105164

Geurts, M. M. G., Clausen, J. D., Arnou, B., Montigny, C., Lenoir, G., Corey, R. A., Jaxel, C., Møller, J. V., Nissen, P., Andersen, J. P., Le Maire, M. & Bublitz, M. (2020). The SERCA residue Glu340 mediates interdomain communication that guides Ca²⁺transport. Proceedings of the National Academy of Sciences (PNAS), 117(49), 31114-31122. https://doi.org/10.1073/pnas.2014896117

Bailey, S., Sroga, G. E., Hoac, B., Katsamenis, O. L., Wang, Z., Bouropoulos, N., McKee, M. D., Sørensen, E. S., Thurner, P. J. & Vashishth, D. (2020). The role of extracellular matrix phosphorylation on energy dissipation in bone. eLife, 9, 1-19. Article e58184. https://doi.org/10.7554/eLife.58184

Hansen, B., Voutchkova, D. D., Sandersen, P. B. E., Kallesøe, A., Thorling, L., Møller, I., Madsen, R. B., Jakobsen, R., Aamand, J., Maurya, P. & Kim, H. (2021). Assessment of complex subsurface redox structures for sustainable development of agriculture and the environment. Environmental Research Letters, 16(2), Article 025007. https://doi.org/10.1088/1748-9326/abda6d

Knudstrup, E., Grundahl, F., Brogaard, K., Slumstrup, D., Orosz, J. A., Sandquist, E. L., Jessen-Hansen, J., Lund, M. N., Arentoft, T., Tronsgaard, R., Yong, D., Frandsen, S. & Bruntt, H. (2020). Extremely precise age and metallicity of the open cluster NGC 2506 using detached eclipsing binaries. Monthly Notices of the Royal Astronomical Society, 499(1), 1312-1339. https://doi.org/10.1093/mnras/staa2855

Nielsen, K. H. (2021). Science and public policy. Metascience, 30(1), 79-81. https://doi.org/10.1007/s11016-020-00581-5

Støy, S., Terczynska-Dyla, E., Veidal, S. S., Rigbolt, K., Vilstrup, H., Grønbaek, H., Hartmann, R. & Sandahl, T. D. (2021). Interferon lambda 4 genotype and pathway in alcoholic hepatitis. Scandinavian Journal of Gastroenterology, 56(3), 304-311. https://doi.org/10.1080/00365521.2021.1874046

Caceres, E. F., Lewis, W. H., Homa, F., Martin, T., Schramm, A., Kjeldsen, K. U. & Ettema, T. J. G. (2019). Near-complete Lokiarchaeota genomes from complex environmental samples using long and short read metagenomic analyses. https://doi.org/10.1101/2019.12.17.879148

Marzocchi, U., Thorup, C., Dam, A.-S., Schramm, A. & Risgaard-Petersen, N. (2020). Dissimilatory Nitrate Reduction to Ammonium in the Cable Bacterium Ca. Electronema Sp. GS. https://doi.org/10.1101/2020.02.22.960823

Sun, M., Chen, M., Wang, M., Hansen, J., Le, D. Q. S., Baatrup, A. O., Dagnaes-Hansen, F., Rölfing, J. H. D., Jensen, J., Lysdahl, H., Johannsen, M., Kjems, J. & Bünger, C. (2015). In Vivo Drug Release Behavior And Bone Biocompatibility Of Doxorubicin-loaded Tissueengineered Scaffold. #1994. Poster session presented at Orthopedic Research Society annual meeting 2015, Las Vegas, United States.

Lam, S. S., Foong, S. Y., Lee, B. HK., Low, F., Alstrup, A. K. O., Ok, Y. S., Peng, W. & Sonne, C. (2021). Set sustainable goals for the Arctic gateway coordinated international governance is required to resist yet another tipping point. Science of the Total Environment, 776, Article 146003. https://doi.org/10.1016/j.scitotenv.2021.146003

Ateniese, G., Francati, D., Magri, B. & Venturi, D. (2021). Immunization against complete subversion without random oracles. Theoretical Computer Science, 859, 1-36. https://doi.org/10.1016/j.tcs.2021.01.002

Pilatowsky-Cameo, S., Villaseñor, D., Bastarrachea-Magnani, M. A., Lerma-Hernández, S., Santos, L. F. & Hirsch, J. G. (2021). Ubiquitous quantum scarring does not prevent ergodicity. Nature Communications, 12, Article 852. https://doi.org/10.1038/s41467-021-21123-5

Zeppelin, T., Pedersen, K. B., Berglund, N. A., Periole, X. & Schiøtt, B. (2021). Effect of palmitoylation on the dimer formation of the human dopamine transporter. Scientific Reports, 11(1), Article 4164. https://doi.org/10.1038/s41598-021-83374-y

Andresen, K. J., Dahlin, A., Kjeldsen, K. U., Røy, H., Bennike, O., Nørgaard-Pedersen, N. & Seidenkrantz, M. S. (2021). The longevity of pockmarks – A case study from a shallow water body in northern Denmark. Marine Geology, 434, Article 106440. https://doi.org/10.1016/j.margeo.2021.106440

Olesen, J. L., Østergaard, L., Shemesh, N. & Jespersen, S. N. (2021). Beyond the diffusion standard model in fixed rat spinal cord with combined linear and planar encoding. NeuroImage, 231, Article 117849. https://doi.org/10.1016/j.neuroimage.2021.117849

Beedholm, K., Malinka, C., Ladegaard, M. & Madsen, P. T. (2021). Do echolocating toothed whales direct their acoustic gaze on- or off-target in a static detection task? Journal of the Acoustical Society of America, 149(1), 581-590. https://doi.org/10.1121/10.0003357

Shahsavar, A., Stohler, P., Bourenkov, G., Zimmermann, I., Siegrist, M., Guba, W., Pinard, E., Sinning, S., Seeger, M. A., Schneider, T. R., Dawson, R. J. P. & Nissen, P. (2021). Structural insights into the inhibition of glycine reuptake. Nature, 591(7851), 677-681. https://doi.org/10.1038/s41586-021-03274-z

Troullinou, G., Kondylakis, H., Lissandrini, M. & Mottin, D. (2021). SOFOS: Demonstrating the Challenges of Materialized View Selection on Knowledge Graph. In Proceedings of the 2021 International Conference on Management of Data (SIGMOD/PODS '21) (pp. 2789–2793). Association for Computing Machinery. https://doi.org/10.1145/3448016.3452765

Steininger, F., Zieger, S. E. & Koren, K. (2021). Dynamic Sensor Concept Combining Electrochemical pH Manipulation and Optical Sensing of Buffer Capacity. Analytical Chemistry, 93(8), 3822-3829. https://doi.org/10.1021/acs.analchem.0c04326

Nielsen, K. H. (2021). Uenighed om enighed. Weekendavisen, (Sektion 4 (Ideer)), 5.

Andersen, S. U., Chakraborty, T., Chen, W., Chen, X.-M., Chen, Y., Hansen, M., Huang, K., Hubner, C. A., Jensen, T. E., Jessen, N., Kaufmann, S. H. E., Lee, J.-Y., Li, B., Li, J., Li, J., Li, Q., Li, Y., Lindner, P., Liu, W. ... Rogov, V. (2021). Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition) ¹. Autophagy, 17(1), 1-382. https://doi.org/10.1080/15548627.2020.1797280

Tomsen-Melero, J., Passemard, S., García-Aranda, N., Días-Riascos, Z. V., González-Rioja, R., Pedersen, J. N., Lyngsø, J., Merlo-Mas, J., Cristóbal-Lecina, E., Corchero, J. L., Pulido, D., Cámara-Sánchez, P., Portnaya, I., Ionita, I., Schwarz, Jr., S., Veciana, J., Sala, S., Royo, M., Córdoba, A. ... Ventosa, N. (2021). Impact of Chemical Composition on the Nanostructure and Biological Activity of α-Galactosidase-Loaded Nanovesicles for Fabry Disease Treatment. ACS applied materials & interfaces, 13(7), 7825-7838. https://doi.org/10.1021/acsami.0c16871

Ma, S. N., Wang, H. J., Wang, H. Z., Zhang, M., Li, Y., Bian, S. J., Liang, X. M., Søndergaard, M. & Jeppesen, E. (2021). Effects of nitrate on phosphorus release from lake sediments. Water Research, 194, Article 116894. https://doi.org/10.1016/j.watres.2021.116894

Barfod, A. S., Bruun, H. H., Clausen, P., Dinesen, L., Egemose, S., Ejrnæs, R., Fløjgaard, C., Heilmann-Clausen, J., Kragh, T., Petersen, A. H., Rahbek, C., Roth, E., Raulund-Rasmussen, K., Schou, J. S., Svenning, J.-C. & Søndergaard, M. (2020). Genopretning af biodiversitet og økosystemer i Danmark: Ekspertudtalelse. IPBES i Danmark.

Damgård, I. B., Orlandi, C., Takahashi, A. & Tibouchi, M. (2021). Two-round n-out-of-n and Multi-Signatures and Trapdoor Commitment from Lattices. In J. A. Garay (Ed.), Public-Key Cryptography – PKC 2021 - 24th IACR International Conference on Practice and Theory of Public Key Cryptography, 2021, Proceedings: 24rd IACR International Conference on Practice and Theory of Public-Key Cryptography, proceedings part 1 (pp. 99-130). Springer. https://doi.org/10.1007/978-3-030-75245-3_5

Andreasen, R. & Thomsen, E. (2021). Strontium Is Released Rapidly From Agricultural Lime–Implications for Provenance and Migration Studies. Frontiers in Ecology and Evolution, 8, Article 588422. https://doi.org/10.3389/fevo.2020.588422

von Oppen, J., Normand, S., Bjorkman, A. D., Blach-Overgaard, A., Assmann, J. J., Forchhammer, M. C., Guéguen, M. & Nabe-Nielsen, J. (2021). Annual air temperature variability and biotic interactions explain tundra shrub species abundance. Journal of Vegetation Science, 32(2), Article e13009. https://doi.org/10.1111/jvs.13009

Otte, J. M. & Volz, J. (2021). Spatial distribution of metal-cycling microbial communities along geochemical gradients in sediments of polymetallic nodule fields, Eastern Pacific Ocean. Abstract from Goldschmidt Conference, France.

Otte, J. M. (2020). Microbial communities of the deep seafloor sediment and manganese nodules from the Clarion-Clipperton Zone, Eastern Pacific Ocean. Poster session presented at AGU, Ocean Science Meeting, San Diego, United States.

Hansen, S. D., Nygaard, N. & Mølmer, K. (2021). Scattering of Matter Wave Solitons on Localized Potentials. Applied Sciences, 11(5), Article 2294. https://doi.org/10.3390/app11052294

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