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Department of Biology

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The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Zhang, Y., Chong, M. K., Müller, J., Bulling, A. & Gellersen, H. (2015). Eye tracking for public displays in the wild. Personal and Ubiquitous Computing, 19(5-6), 967-981. https://doi.org/10.1007/s00779-015-0866-8

Dodis, Y. & Nielsen, J. B. (Eds.) (2015). Theory of Cryptography: 12th Theory of Cryptography Conference, TCC 2015, Warsaw, Poland, March 23-25, 2015, Proceedings, Part II. Springer VS. Lecture Notes in Computer Science Vol. 9015 https://doi.org/10.1007/978-3-662-46497-7

Damgård, I. B., Dupont-Dupuis, F. & Nielsen, J. B. (2015). On the Orthogonal Vector Problem and the Feasibility of Unconditionally Secure Leakage-Resilient Computation. In Information Theoretic Security: 8th International Conference, ICITS 2015, Lugano, Switzerland, May 2-5, 2015. Proceedings (pp. 87-104). Springer VS. https://doi.org/10.1007/978-3-319-17470-9_6

Petersen, M. G., Rasmussen, M. K. & Jakobsen, K. (2015). Framing open-ended and constructive play with emerging interactive materials. In Proceedings of the 14th International Conference on Interaction Design and Children , IDC '15 (pp. 150-159 ). Association for Computing Machinery. https://doi.org/10.1145/2771839.2771855

Botero, A., Van Amste, F., Seravalli, A. & Saad-Sulonen, J. (2015). WS co-designing and commoning. Nordic Design Research, 2015(6). http://www.nordes.org/opj/index.php/n13/article/view/422

Nielsen, K. H. (2015). Gen. Weekendavisen, Ideer, 10.

Shegani, M., Tsikou, D., Velimirovic, A., Afifi, H., Karayanni, A., Gazivoda, A., Manevski, K., Manakos, I. & Livieratos, I. C. (2012). Citrus Tristeza Virus on the Island of Crete: A Survey and Detection Protocol Applications. Journal of Plant Pathology, 94(1), 71-78. https://www.jstor.org/stable/45156010

Faist, P., Dupont-Dupuis, F., Oppenheim, J. & Renner, R. (2015). The minimal work cost of information processing. Nature Communications, 6, Article 7669. https://doi.org/10.1038/ncomms8669

Döttling, N., Kraschewski, D., Müller-Quade, J. & Nilges, T. (2015). General statistically secure computation with bounded-resettable hardware tokens. In Y. Dodis & J. Buus Nielsen (Eds.), Theory of Cryptography: 12th Theory of Cryptography Conference, TCC 2015, Warsaw, Poland, March 23-25, 2015, Proceedings, Part I (pp. 319-344). Springer VS. https://doi.org/10.1007/978-3-662-46494-6_14

Dodis, Y. & Nielsen, J. B. (Eds.) (2015). Theory of Cryptography: 12th Theory of Cryptography Conference, TCC 2015, Warsaw, Poland, March 23-25, 2015, Proceedings, Part I. Springer VS. Lecture Notes in Computer Science Vol. 9014 https://doi.org/10.1007/978-3-662-46494-6

Döttling, N. M. (2015). Low noise LPN: KDM secure public key encryption and sample amplification. In J. Katz (Ed.), Public-Key Cryptography -- PKC 2015: 18th IACR International Conference on Practice and Theory in Public-Key Cryptography, Gaithersburg, MD, USA, March 30 -- April 1, 2015, Proceedings (Vol. 9020, pp. 604-626). Springer VS. https://doi.org/10.1007/978-3-662-46447-2_27

Döttling, N. M. & Schröder, D. (2015). Efficient Pseudorandom Functions via On-the-Fly Adaptation. In R. Gennaro & M. Robshaw (Eds.), Advances in Cryptology – CRYPTO 2015: 35th Annual Cryptology Conference, Santa Barbara, CA, USA, August 16-20, 2015, Proceedings, Part I (pp. 329-350). Springer VS. https://doi.org/10.1007/978-3-662-47989-6_16

Hansen, T. D. & Zwick, U. (2015). Improved Version of the Random-Facet Pivoting Rule for the Simplex Algorithm. In Proceedings of the Forty-Seventh Annual ACM on Symposium on Theory of Computing, STOC '15 (pp. 209-218 ). Association for Computing Machinery. https://doi.org/10.1145/2746539.2746557

Gambs, S., Ranellucci, S. & Tapp, A. (2015). The crypto-democracy and the trustworthy (position paper). In Data Privacy Management, Autonomous Spontaneous Security, and Security Assurance: 9th International Workshop, DPM 2014, 7th International Workshop, SETOP 2014, and 3rd International Workshop, QASA 2014, Wroclaw, Poland, September 10-11, 2014. Revised Selected Papers (Vol. 8872, pp. 58-76). Springer VS. https://doi.org/10.1007/978-3-319-17016-9_5

Bizjak, A. & Møgelberg, R. E. (2015). A model of guarded recursion with clock synchronisation. Electronic Notes in Theoretical Computer Science, 319, 83-101. https://doi.org/10.1016/j.entcs.2015.12.007

David, B. M., Dowsley, R., van der Graaf, J., Marques, D., Nascimento, A. C. A. & Pinto, A. (2015). Unconditionally Secure, Universally Composable Privacy Preserving Linear Algebra. I E E E Transactions on Information Forensics and Security, 11(1), 59 - 73 . https://doi.org/10.1109/TIFS.2015.2476783

Frederiksen, T. K., Nielsen, J. B. & Orlandi, C. (2015). Privacy-Free Garbled Circuits with Applications to Efficient Zero-Knowledge. In E. Oswald & M. Fischlin (Eds.), Advances in Cryptology - EUROCRYPT 2015: 34th Annual International Conference on the Theory and Applications of Cryptographic Techniques, Sofia, Bulgaria, April 26-30, 2015, Proceedings, Part II (pp. 191-219). Springer VS. https://doi.org/10.1007/978-3-662-46803-6_7

Garg, S. & Polychroniadou, A. (2015). Two-round adaptively secure MPC from indistinguishability obfuscation. In Y. Dodis & J. Buus Nielsen (Eds.), Theory of Cryptography: 12th Theory of Cryptography Conference, TCC 2015, Warsaw, Poland, March 23-25, 2015, Proceedings, Part II (pp. 614-637). Springer VS. https://doi.org/10.1007/978-3-662-46497-7_24

Genkin, D., Ishai , Y. & Polychroniadou, A. (2015). Efficient Multi-party Computation: From Passive to Active Security via Secure SIMD Circuits. In R. Gennaro & M. Robshaw (Eds.), Advances in Cryptology -- CRYPTO 2015: 35th Annual Cryptology Conference, Santa Barbara, CA, USA, August 16-20, 2015, Proceedings, Part II (pp. 721-741). Springer VS. https://doi.org/10.1007/978-3-662-48000-7_35

Otto, R., Whittaker, R. J., von Gaisberg, M., Stierstorfer, C., Naranjo-Cigala, A., Steinbauer, M., Borregaard, M. K., Arévalo, J. R., Garzón-Machado, V., Del Arco, M. & Fernández-Palacios, J. M. (2016). Transferring and implementing the general dynamic model of oceanic island biogeography at the scale of island fragments: the role of geological age and topography in plant diversification in the Canaries. Journal of Biogeography, 43(5), 911–922. Article 43. https://doi.org/10.1111/jbi.12684

Schweiger, A., Irl, S. D. H., Steinbauer, M., Dengler, J. & Beierkuhnlein, C. (2016). Optimizing sampling approaches along ecological gradients. Methods in Ecology and Evolution, 7(4), 463– 471. https://doi.org/10.1111/2041-210X.12495

Müller, A., Bøcher, P. K. & Svenning, J.-C. (2015). Where are the wilder parts of anthropogenic landscapes? A mapping case study for Denmark. Landscape and Urban Planning, 144(Dec.), 90-102. https://doi.org/10.1016/j.landurbplan.2015.08.016

Faurby, S. & Svenning, J.-C. (2015). Historic and prehistoric human-driven extinctions have reshaped global mammal diversity patterns. Diversity and Distributions, 21(10), 1155-1166. https://doi.org/10.1111/ddi.12369

Elleriis, P., Pedersen, M. L. & Toft, S. (2015). Impact of invasive Rosa rugosa on the arthropod fauna of Danish yellow dunes. Biological Invasions, 17(11), 3289-3302. https://doi.org/10.1007/s10530-015-0953-9

Son, W., Bae, S. W. & Ahn, H. K. (2015). Group nearest neighbor queries in the L1 plane. Theoretical Computer Science, 592, 39–48. https://doi.org/10.1016/j.tcs.2015.05.011

Poulsen, S. E., Balling, N. & Nielsen, S. B. (2015). A parametric study of the thermal recharge of low enthalpy geothermal reservoirs. Geothermics, 53, 464-478. https://doi.org/10.1016/j.geothermics.2014.08.003

Bosansky, B., Branzei, S., Hansen, K. A., Miltersen, P. B. & Sørensen , T. B. (2015). Computation of Stackelberg Equilibria of Finite Sequential Games. In E. Markakis & G. Schäfer (Eds.), Web and Internet Economics: 11th International Conference, WINE 2015, Amsterdam, The Netherlands, December 9-12, 2015, Proceedings (Vol. 9470, pp. 201-215). Springer VS. http://arxiv.org/abs/1507.07677

Lian, Z., Friis, S. D. & Skrydstrup, T. (2015). C–H Activation Dependent Pd-Catalyzed Carbonylative Coupling of (Hetero)Aryl Bromides and Polyfluoroarenes. Chemical Communications, 51(10), 1870-1873. https://doi.org/10.1039/c4cc09303h

Lian, Z., Friis, S. D. & Skrydstrup, T. (2015). Palladium-catalysed carbonylative α-arylation of nitromethane. Chemical Communications, 51(17), 3600-3603. https://doi.org/10.1039/C5CC00123D, https://doi.org/10.1039/c5cc00123d

Lian, Z., Yin, H., Friis, S. D. & Skrydstrup, T. (2015). Pd-Catalyzed Carbonylative Access to Aroyl Phosphonates from (Hetero)Aryl Bromides. Chemical Communications, 51, 7831-7834. https://doi.org/10.1039/c5cc02085a

Huang, Z., Radunović, B., Vojnović, M. & Zhang, Q. (2015). Communication complexity of approximate matching in distributed graphs. In 32nd International Symposium on Theoretical Aspects of Computer Science: STACS’15, March 4–7, 2015, Garching, Germany (pp. 460-473). Dagstuhl Publishing. https://doi.org/10.4230/LIPIcs.STACS.2015.460

Nielsen, D. U., Lian, Z., Lindhardt, A. T. & Skrydstrup, T. (2016). Pd-Catalyzed Carbonylative Synthesis of Other-Membered Heterocycles from Aryl Halides. In X.-F. Wu & M. Beller (Eds.), Topics in Heterocyclic Chemistry: Transition Metal Catalyzed Carbonylative Synthesis of Heterocycles (Vol. 42, pp. 89-99). Springer.

Sokol, M., Jessen, K. M. & Pedersen, F. S. (2016). Utility of next-generation RNA-sequencing in identifying chimeric transcription involving human endogenous retroviruses. A P M I S. Acta Pathologica, Microbiologica et Immunologica Scandinavica, 124(1-2), 127-139. https://doi.org/10.1111/apm.12477

Zhang, X., Odgaard, R., Olesen, B., Lauridsen, T. L., Søndergaard, M., Liu, Z. & Jeppesen, E. (2015). Warming shows differential effects on late-season growth and competitive capacity of Elodea canadensis and Potamogeton crispus in shallow lakes. Inland Waters, 5, 421-432.

Salami Dehkharghani, A., Volosniev, A. G. & Zinner, N. T. (2015). Quantum Impurity in a One-dimensional Trapped Bose Gas. Physical Review A, 92(3), Article 031601(R). https://doi.org/10.1103/PhysRevA.92.031601

Carroll, J., Clasen, M., Jonsson, E., Kratschmer, A. R., McKerracher, L. J., Riede, F., Svenning, J.-C. & Kjærgaard, P. C. (2017). Biocultural Theory: The Current State of Knowledge. Evolutionary Behavioral Sciences, 11(1), 1-15. https://doi.org/10.1037/ebs0000058

Peixoto, M. J., Svendsen, J. C., Nielsen, H. M., Pereira, L. F. P., Carvalho, P. C., Pereira, R. P., Gonçalves, J. F. G. & Ozório, R. O. O. (2016). Diets supplemented with seaweed affect metabolic rate, innate immune and antioxidant responses, but not individual growth rate in European seabass (Dicentrarchus labrax). Journal of Applied Phycology, 28(3), 2061-2071. https://doi.org/10.1007/s10811-015-0736-9

Nielsen, M., Schreiber, L., Finster, K. & Schramm, A. (2015). Erratum to 'Draft genome sequence of Bacillus azotoformans MEV2011, a (Co-) denitrifying strain unable to grow with oxygen'. Standards in Genomic Sciences, 10(72). https://doi.org/10.1186/s40793-015-0057-2

Nielsen, M., Schreiber, L., Finster, K. & Schramm, A. (2015). Draft genome sequence of Bacillus azotoformans MEV2011, a (Co-) denitrifying strain unable to grow with oxygen. Standards in Genomic Sciences, 10(4), Article 72. https://doi.org/10.1186/1944-3277-10-4

Kristensen, P. M., Lund, M. B. & Schramm, A. (2015). Evolution of the tripartite symbiosis between earthworms, Verminephrobacter and Flexibacter-like bacteria. Frontiers in Microbiology, 6, Article 529. https://doi.org/10.3389/fmicb.2015.00529

Pold, S., Bertelsen, O. W., Koefoed Hansen, L., Andersen, C. U., Bardzell, S. & Bardzell, J. (2015). Criticism – for Computational Alternatives. In O. Bertelsen & K. Halskov (Eds.), Critical Alternatives, 5th decennial Aarhus Conference: conference proceedings, conference papers Department of Computer Science, Aarhus University. https://doi.org/10.7146/aahcc.v1i1.21621

Gomes, S. I. L., Murphy, M., Nielsen, M. T., Kristiansen, S. M., Amorim, M. J. B. & Scott-Fordsmand, J. J. (2015). Cu-nanoparticles ecotoxicity - Explored and explained? Chemosphere, 139, 240-245. https://doi.org/10.1016/j.chemosphere.2015.06.045

Gomes, S. I. L., Hansen, D., Scott-Fordsmand, J. J. & Amorim, M. J. B. (2015). Effects of silver nanoparticles to soil invertebrates: Oxidative stress biomarkers in Eisenia fetida. Environmental Pollution, 199, 49-55. https://doi.org/10.1016/j.envpol.2015.01.012

Knudsen, M., Søndergaard, D. A., Tofting-Olesen, C., Hansen, F. T., Brodersen, D. E. & Pedersen, C. S. (2016). Computational discovery of specificity-conferring sites in non-ribosomal peptide synthetases. Bioinformatics, 32(3), 325-329. https://doi.org/10.1093/bioinformatics/btv600

Palmtag, J., Hugelius, G., Lashchinskiy, N., Tamstorf, M. P., Richter, A., Elberling, B. & Kuhry, P. (2015). Storage, landscape distribution, and burial history of soil organic matter in contrasting areas of continuous permafrost. Arctic, Antarctic, and Alpine Research, 47(1), 71-88. https://doi.org/10.1657/AAAR0014-027

Thorup, A. C. S. & Jeppesen, P. B. (2012). Investigating the health promoting effects of vegetables on people with type 2 diabetes and the metabolic syndrome. Abstract from 30th International Symposium on Diabets and Nutrition Study Group, Athen, Greece.

Paslawski, W., Lorenzen, N. & Otzen, D. E. (2016). Formation and Characterization of α-Synuclein Oligomers. Methods in molecular biology (Clifton, N.J.), 1345, 133-150. https://doi.org/10.1007/978-1-4939-2978-8_9

Thomsen, J., Hjortebjerg, R., Espelund, U., Ørtoft, G., Vestergaard, P., Magnusson, N. E., Conover, C. A., Tramm, T., Hager, H., Høgdall, C., Høgdall, E., Oxvig, C. & Frystyk, J. (2015). PAPP-A proteolytic activity enhances IGF bioactivity in ascites from women with ovarian carcinoma. OncoTarget, 6(31), 32266-32278. https://doi.org/10.18632/oncotarget.5010

Kurizki, G., Bertet, P., Kubo, Y., Mølmer, K., Petrosyan, D., Rabl, P. & Schmiedmayer, J. (2015). Quantum technologies with hybrid systems. Proceedings of the National Academy of Sciences (PNAS), 112(13), 3866–3873. https://doi.org/10.1073/pnas.1419326112

Pelaudeix, C. (2015). Governance of Arctic Offshore Oil & Gas Activities: Multilevel Governance & Legal Pluralism at Stake. Arctic Yearbook, 1, 214-233.

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